Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 2.1e-100 369.0 184 100.0
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 3.9e-86 321.6 184 86.4
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 1.1e-80 303.5 184 81.5
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 2.4e-80 302.4 182 81.9
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 3.2e-80 302.0 184 79.3
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 5.4e-80 301.2 184 81.0
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 9.2e-80 300.4 184 79.3
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.1e-79 299.3 182 79.7
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 3.5e-79 298.5 182 81.3
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 3.5e-79 298.5 182 81.3
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 4.6e-79 298.1 184 79.9
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 6.0e-79 297.7 182 80.8
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 7.8e-79 297.4 184 80.4
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.3e-78 296.6 184 79.9
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 1.3e-78 296.6 182 80.2
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.7e-78 296.2 184 77.7
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 3.0e-78 295.4 184 79.9
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 3.9e-78 295.0 184 77.2
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 5.1e-78 294.7 182 78.6
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 5.1e-78 294.7 184 79.3
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 1.1e-77 293.5 184 77.7
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 1.5e-77 293.1 184 78.8
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.5e-77 293.1 184 78.3
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.5e-77 293.1 184 77.2
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.9e-77 292.7 184 78.3
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 1.9e-77 292.7 184 77.7
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.5e-77 292.4 184 79.9
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 2.5e-77 292.4 182 80.2
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 4.3e-77 291.6 184 77.7
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 5.6e-77 291.2 184 77.2
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 5.6e-77 291.2 184 77.2
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 9.5e-77 290.4 182 78.6
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.2e-76 290.0 184 78.3
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 2.8e-76 288.9 184 77.7
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.8e-76 288.9 184 76.6
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 2.8e-76 288.9 182 77.5
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 3.6e-76 288.5 184 76.6
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 3.6e-76 288.5 184 77.2
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 6.2e-76 287.7 182 75.3
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 8.1e-76 287.3 184 77.2
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.1e-75 287.0 182 77.5
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 1.1e-75 287.0 184 76.1
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 1.4e-75 286.6 184 77.2
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.3e-75 285.8 184 77.7
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 3.1e-75 285.4 189 77.2
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 4.0e-75 285.0 184 76.6
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 4.0e-75 285.0 184 76.6
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 5.2e-75 284.6 183 76.0
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 5.2e-75 284.6 184 77.2
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 1.2e-74 283.5 184 75.5
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.5e-74 283.1 184 76.6
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.5e-74 283.1 182 76.9
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 2.0e-74 282.7 184 77.2
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 2.0e-74 282.7 188 75.5
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 3.4e-74 282.0 184 76.6
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 3.4e-74 282.0 184 75.5
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 4.4e-74 281.6 182 76.4
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 4.4e-74 281.6 184 76.6
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 4.4e-74 281.6 182 76.9
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 5.8e-74 281.2 184 76.1
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 7.6e-74 280.8 184 75.5
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.3e-73 280.0 173 81.5
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 1.7e-73 279.6 184 76.1
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 2.9e-73 278.9 177 78.0
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 3.7e-73 278.5 185 76.2
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 6.4e-73 277.7 182 74.7
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 8.3e-73 277.3 184 75.0
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.1e-72 276.9 183 76.0
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 7.1e-72 274.2 184 72.3
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 1.6e-71 273.1 184 74.5
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.6e-71 273.1 173 78.0
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 1.6e-71 273.1 185 74.1
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 2.1e-71 272.7 184 73.9
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 3.5e-71 271.9 182 74.7
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 6.0e-71 271.2 184 73.4
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 7.8e-71 270.8 182 73.1
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.3e-70 269.2 182 73.1
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 3.3e-69 265.4 173 76.9
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 1.4e-67 260.0 184 71.7
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 6.8e-67 257.7 184 68.5
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.2e-66 256.9 243 58.4
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 9.9e-66 253.8 182 72.5
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.7e-65 253.1 182 70.3
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.9e-64 249.6 158 77.2
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 1.9e-64 249.6 302 48.7
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 3.2e-64 248.8 229 62.9
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 9.3e-64 247.3 173 74.0
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 3.9e-62 241.9 225 57.3
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 5.1e-62 241.5 184 66.8
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.5e-61 240.0 140 84.3
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 2.5e-61 239.2 180 63.3
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 9.6e-61 237.3 184 66.3
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 8.1e-60 234.2 173 70.5
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 1.8e-59 233.0 326 43.9
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 3.1e-59 232.3 190 64.2
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.2e-58 230.3 176 65.9
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.5e-58 229.9 179 67.0
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 3.4e-58 228.8 137 82.5
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 4.2e-56 221.9 184 65.2
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.6e-55 219.9 181 61.9
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 4.6e-55 218.4 180 59.4
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 2.3e-54 216.1 143 76.2
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.9e-53 213.0 137 77.4
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 2.5e-53 212.6 183 64.5
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 3.2e-48 195.7 125 76.0
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 4.2e-48 195.3 139 74.1
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.0e-46 189.1 247 45.7
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.1e-43 180.6 184 48.4
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 3.1e-43 179.1 137 62.8
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 6.9e-43 177.9 104 83.7
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 8.4e-41 171.0 117 75.2
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 8.7e-38 161.0 157 51.0
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 4.8e-36 155.2 98 72.4
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 1.3e-33 147.1 103 68.9
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 1.9e-32 143.3 191 42.9
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 4.1e-27 125.6 86 70.9
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 4.6e-23 112.1 63 85.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 3.9e-22 109.0 180 32.8
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 1.5e-21 107.1 70 80.0
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.5e-13 80.5 60 66.7
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 4.4e-13 79.0 229 24.0
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 7.4e-13 78.2 43 86.0
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 3.5e-10 69.3 155 29.7
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.3e-09 67.4 65 52.3


User provided reference genes

Program Settings