Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 3.7e-140 501.5 250 100.0
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.6e-63 246.9 229 62.9
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.1e-56 224.2 228 57.0
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.0e-52 211.1 229 52.8
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 4.2e-51 205.7 228 52.6
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 5.5e-51 205.3 228 53.1
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 5.5e-51 205.3 227 53.7
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 5.5e-51 205.3 227 53.7
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 9.3e-51 204.5 228 52.6
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 1.2e-50 204.1 227 52.9
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 1.2e-50 204.1 228 51.8
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.6e-50 203.8 228 52.2
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 2.7e-50 203.0 228 52.2
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 7.9e-50 201.4 228 52.2
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 7.9e-50 201.4 227 52.9
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.3e-49 200.7 228 51.8
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 1.8e-49 200.3 228 51.3
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 3.0e-49 199.5 228 51.8
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 3.9e-49 199.1 228 50.9
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 5.1e-49 198.7 228 51.3
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 5.1e-49 198.7 227 52.9
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 5.1e-49 198.7 228 51.8
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 6.7e-49 198.4 231 51.1
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 8.7e-49 198.0 228 51.3
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 1.1e-48 197.6 228 52.2
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.1e-48 197.6 228 49.6
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 1.5e-48 197.2 227 51.5
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 1.5e-48 197.2 228 51.3
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.5e-48 197.2 228 50.4
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 1.9e-48 196.8 232 51.3
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 2.5e-48 196.4 228 50.0
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 2.5e-48 196.4 228 51.8
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 3.3e-48 196.1 228 50.9
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 4.3e-48 195.7 227 52.4
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 5.7e-48 195.3 228 50.9
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 5.7e-48 195.3 289 44.3
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 9.7e-48 194.5 228 51.8
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 9.7e-48 194.5 228 51.8
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.3e-47 194.1 228 50.4
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 1.3e-47 194.1 228 50.4
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.6e-47 193.7 228 50.4
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.6e-47 193.7 228 52.2
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 1.6e-47 193.7 228 50.9
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.2e-47 193.4 228 50.0
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 2.8e-47 193.0 228 51.8
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 2.8e-47 193.0 228 51.3
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 3.7e-47 192.6 228 50.9
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 4.8e-47 192.2 228 49.1
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.8e-47 192.2 228 50.0
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 4.8e-47 192.2 228 49.6
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 6.3e-47 191.8 228 50.9
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 6.3e-47 191.8 228 51.3
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 6.3e-47 191.8 228 50.9
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 6.3e-47 191.8 228 49.6
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.1e-46 191.0 228 50.0
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.4e-46 190.7 236 49.6
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 1.8e-46 190.3 228 49.6
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 4.1e-46 189.1 221 52.0
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 4.1e-46 189.1 228 49.6
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 4.1e-46 189.1 228 49.6
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 4.1e-46 189.1 228 50.0
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 5.3e-46 188.7 228 50.4
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 6.9e-46 188.3 229 51.1
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 9.1e-46 188.0 228 50.0
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 9.1e-46 188.0 228 50.4
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 9.1e-46 188.0 233 50.2
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.5e-45 187.2 229 51.1
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 3.4e-45 186.0 228 49.1
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 4.5e-45 185.7 221 50.2
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 4.5e-45 185.7 228 49.6
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 5.9e-45 185.3 228 49.6
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 5.9e-45 185.3 228 48.2
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 1.3e-44 184.1 227 49.3
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.7e-44 183.7 221 49.8
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.2e-44 183.3 227 48.0
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 3.8e-44 182.6 228 48.7
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 3.8e-44 182.6 227 48.5
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 6.5e-44 181.8 228 49.6
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 8.5e-44 181.4 228 48.7
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 8.5e-44 181.4 209 51.2
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 1.4e-43 180.6 228 48.7
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 4.2e-43 179.1 229 48.0
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 6.1e-42 175.3 227 47.1
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.4e-41 174.1 229 46.3
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 3.3e-40 169.5 225 45.8
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 5.7e-40 168.7 225 46.2
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.2e-39 166.8 124 67.7
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 6.9e-38 161.8 132 64.4
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 9.1e-38 161.4 228 44.7
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 2.0e-37 160.2 230 42.2
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 2.0e-37 160.2 228 45.6
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 4.5e-37 159.1 221 45.7
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 2.5e-35 153.3 221 44.8
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 3.6e-34 149.4 229 43.2
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 4.7e-34 149.1 227 42.3
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 6.1e-34 148.7 188 48.9
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 5.2e-33 145.6 232 41.8
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.7e-31 140.6 96 71.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.7e-31 139.4 224 41.1
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 4.8e-31 139.0 230 39.6
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 6.3e-31 138.7 185 48.1
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 6.3e-31 138.7 241 39.4
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 5.3e-30 135.6 120 55.8
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 9.1e-30 134.8 100 65.0
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 2.0e-29 133.7 370 30.8
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.3e-28 131.0 129 53.5
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.4e-25 120.9 185 43.2
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 4.8e-23 112.5 162 43.2
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 2.9e-20 103.2 187 41.7
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.5e-19 100.9 232 31.0
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 6.1e-18 95.5 185 35.1
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 1.8e-17 94.0 146 43.2
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.8e-15 86.7 159 39.0
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 7.7e-13 78.6 246 29.3
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 7.2e-11 72.0 145 35.2
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 7.2e-11 72.0 66 59.1
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 1.4e-06 57.8 49 63.3
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 7.0e-06 55.5 48 60.4


User provided reference genes

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