Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 2.9e-151 538.5 264 100.0
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 2.2e-122 442.6 262 83.2
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 7.2e-86 321.2 260 57.3
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 3.6e-85 318.9 261 58.6
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 1.8e-84 316.6 259 56.8
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 5.2e-84 315.1 260 57.3
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 5.4e-81 305.1 283 54.4
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 2.7e-80 302.8 253 57.3
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 2.5e-78 296.2 263 55.1
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 5.7e-75 285.0 281 52.3
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 5.7e-75 285.0 259 52.5
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 1.7e-74 283.5 266 53.8
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 1.7e-74 283.5 260 52.3
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 2.9e-74 282.7 264 53.8
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 3.7e-74 282.3 268 54.9
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.1e-73 280.8 258 52.7
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 1.1e-73 280.8 268 54.5
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 5.4e-73 278.5 289 50.2
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 5.4e-73 278.5 266 52.6
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 9.2e-73 277.7 269 52.0
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 9.2e-73 277.7 258 53.9
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 9.2e-73 277.7 261 54.4
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 9.2e-73 277.7 268 51.9
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 5.9e-72 275.0 263 52.9
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 5.9e-72 275.0 258 52.3
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 7.8e-72 274.6 264 51.5
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 7.8e-72 274.6 264 51.5
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 1.3e-71 273.9 266 51.9
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 2.3e-71 273.1 246 53.7
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 3.0e-71 272.7 261 54.0
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 3.9e-71 272.3 269 50.2
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.1e-70 270.8 261 53.6
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 1.1e-70 270.8 269 50.6
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 1.5e-70 270.4 254 51.6
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 2.5e-70 269.6 265 53.2
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 3.3e-70 269.2 265 52.8
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 4.3e-70 268.9 269 52.8
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 7.3e-70 268.1 259 51.0
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 2.1e-69 266.5 254 54.3
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 3.6e-69 265.8 254 50.8
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 3.6e-69 265.8 261 50.6
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 3.6e-69 265.8 252 51.6
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 6.2e-69 265.0 259 52.9
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 6.2e-69 265.0 262 51.9
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 8.0e-69 264.6 262 50.4
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 8.0e-69 264.6 265 51.7
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.8e-68 263.5 262 51.1
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 3.1e-68 262.7 265 50.6
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 4.0e-68 262.3 258 52.7
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 4.0e-68 262.3 262 51.9
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 4.0e-68 262.3 263 50.6
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.2e-67 260.8 264 51.9
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 1.5e-67 260.4 263 49.8
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 2.0e-67 260.0 244 52.9
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.0e-67 260.0 263 49.8
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 5.8e-67 258.5 263 50.2
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.3e-66 257.3 268 50.7
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 6.4e-66 255.0 266 51.1
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 8.3e-66 254.6 268 51.1
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.4e-65 253.8 231 51.9
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.9e-65 253.4 242 53.7
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 4.1e-65 252.3 260 49.2
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 1.6e-64 250.4 266 50.4
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 2.0e-64 250.0 210 57.1
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 2.0e-64 250.0 242 51.2
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 3.5e-64 249.2 245 50.6
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.6e-64 248.8 245 50.6
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 7.8e-64 248.1 253 48.2
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 1.7e-63 246.9 252 49.6
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 2.3e-63 246.5 253 48.2
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 3.9e-63 245.7 228 53.5
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 3.9e-63 245.7 250 51.2
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 1.1e-62 244.2 228 53.5
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 2.5e-62 243.0 199 56.8
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 2.5e-62 243.0 211 56.4
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 5.6e-62 241.9 253 48.2
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 7.3e-62 241.5 247 50.6
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 7.3e-62 241.5 251 47.4
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 9.5e-62 241.1 246 50.8
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 1.2e-61 240.7 248 49.6
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 8.1e-61 238.0 265 46.8
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 5.2e-60 235.3 227 50.2
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.5e-59 233.8 246 48.4
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 4.4e-59 232.3 230 50.4
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 4.4e-59 232.3 244 47.1
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 7.5e-59 231.5 260 45.4
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 9.8e-59 231.1 218 52.3
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 9.8e-59 231.1 264 46.2
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 1.3e-58 230.7 218 50.9
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 2.2e-58 229.9 260 45.8
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 2.2e-58 229.9 224 50.4
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 2.2e-58 229.9 268 46.3
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 2.9e-58 229.6 267 45.7
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 3.7e-58 229.2 234 47.4
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 4.9e-58 228.8 240 50.8
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 6.4e-58 228.4 276 45.3
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 1.4e-57 227.3 261 44.8
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 2.4e-57 226.5 214 51.9
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 4.1e-57 225.7 231 48.9
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 5.4e-57 225.3 260 46.2
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 1.6e-56 223.8 233 46.4
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 3.5e-56 222.6 231 49.4
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 4.6e-56 222.2 270 46.7
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 6.0e-56 221.9 264 45.1
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 7.8e-56 221.5 269 46.8
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 1.0e-55 221.1 248 45.2
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 1.0e-55 221.1 259 42.9
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 1.3e-55 220.7 264 43.6
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 1.7e-55 220.3 259 43.6
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 1.7e-55 220.3 259 43.6
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 1.7e-55 220.3 259 43.6
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.3e-55 219.9 222 49.5
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 3.9e-55 219.2 261 42.1
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 3.9e-55 219.2 261 42.1
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 5.1e-55 218.8 261 42.9
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 5.1e-55 218.8 261 42.9
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.5e-54 217.2 239 44.8
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 2.5e-54 216.5 201 52.2
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 4.3e-54 215.7 261 46.4
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 5.6e-54 215.3 178 59.6
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 7.3e-54 214.9 281 39.5
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 4.0e-52 209.1 209 49.3
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 4.0e-52 209.1 240 45.0
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 5.2e-52 208.8 248 44.8
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 2.6e-51 206.5 266 44.4
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 4.4e-51 205.7 232 48.7
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 5.8e-51 205.3 248 43.1
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 7.6e-51 204.9 218 46.8
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 2.9e-50 203.0 210 47.1
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 3.7e-50 202.6 251 43.8
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 4.9e-50 202.2 210 46.2
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 6.4e-50 201.8 261 41.0
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 6.4e-50 201.8 266 44.0
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 1.1e-49 201.1 218 45.0
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 4.1e-49 199.1 215 47.0
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 1.2e-48 197.6 179 53.6
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 2.1e-48 196.8 238 47.1
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 2.7e-48 196.4 169 53.3
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 6.0e-48 195.3 307 36.8
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 1.3e-47 194.1 178 55.1
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.7e-47 193.7 263 40.3
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 6.6e-47 191.8 275 40.4
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 1.9e-46 190.3 223 45.3
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 3.6e-45 186.0 181 52.5
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 6.2e-45 185.3 263 39.5
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 6.4e-42 175.3 260 37.3
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.2e-40 171.0 159 47.8
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 1.2e-40 171.0 181 49.2
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.2e-40 171.0 149 55.7
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 8.1e-37 158.3 166 44.6
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.4e-36 156.8 260 38.5
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 6.9e-36 155.2 221 42.1
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 9.0e-36 154.8 229 40.2
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 1.2e-32 144.4 303 29.4
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 2.1e-32 143.7 244 34.8
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 6.0e-32 142.1 219 38.8
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 1.3e-31 141.0 128 55.5
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 1.7e-31 140.6 220 35.0
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 3.0e-31 139.8 179 42.5
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 6.6e-31 138.7 122 55.7
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 3.6e-29 132.9 318 26.7
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 9.3e-25 118.2 165 41.2
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 4.6e-24 115.9 240 30.8
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 1.0e-23 114.8 100 56.0
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 2.3e-23 113.6 218 32.6
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 3.0e-23 113.2 255 32.2
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 3.7e-21 106.3 193 36.8
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.1e-20 104.8 79 62.0
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 2.4e-20 103.6 72 63.9
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 2.4e-20 103.6 85 55.3
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 2.2e-18 97.1 259 28.2
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 1.1e-17 94.7 62 64.5
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 7.1e-17 92.0 260 27.7
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-14 84.7 172 31.4
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 1.1e-14 84.7 127 39.4
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.9e-14 84.0 85 50.6
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 6.3e-13 79.0 129 36.4
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 1.8e-12 77.4 147 38.1
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 4.2e-09 66.2 100 41.0
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 9.3e-09 65.1 46 63.0
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.6e-08 64.3 75 44.0
Actinidia09310 Actinidia chinensis HOM05D003612 ORTHO05D004323 6.7e-07 58.9 44 59.1
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 6.7e-07 58.9 55 56.4
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 6.7e-07 58.9 43 55.8
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 5.7e-06 55.8 60 43.3


User provided reference genes

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