Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund15551 Selenicereus undatus HOM05D006597 ORTHO05D008141 1.5e-69 266.2 144 100.0
Dinv28218 Davidia involucrata HOM05D006597 ORTHO05D008141 7.5e-45 184.1 121 78.5
PGR042G1892 Punica granatum HOM05D006597 ORTHO05D008141 1.7e-44 183.0 126 74.6
Sc14g0006400 Simmondsia chinensis HOM05D006597 ORTHO05D008141 1.2e-42 176.8 131 68.7
AUR62038689 Chenopodium quinoa HOM05D006597 ORTHO05D008141 2.1e-42 176.0 118 77.1
Atru.chr1.1860 Acer truncatum HOM05D006597 ORTHO05D008141 6.0e-42 174.5 126 71.4
Thecc.04G117800 Theobroma cacao HOM05D006597 ORTHO05D008141 6.0e-42 174.5 120 74.2
CANSAT78G2380 Cannabis sativa HOM05D006597 ORTHO05D008141 2.3e-41 172.6 118 75.4
Cpa.g.sc116.41 Carica papaya HOM05D006597 ORTHO05D008141 2.3e-41 172.6 120 75.8
SGA_v2.0_scaffold13G06385 Striga asiatica HOM05D006597 ORTHO05D008141 2.3e-41 172.6 118 77.1
Cfa007827 Carpinus fangiana HOM05D006597 ORTHO05D008141 3.0e-41 172.2 120 74.2
AUR62018202 Chenopodium quinoa HOM05D006597 ORTHO05D008141 3.0e-41 172.2 118 75.4
MSTRG.15326 Avicennia marina HOM05D006597 ORTHO05D008141 5.0e-41 171.4 118 75.4
Eucgr.J01591 Eucalyptus grandis HOM05D006597 ORTHO05D008141 8.6e-41 170.6 126 69.8
Duzib133G0875 Durio zibethinus HOM05D006597 ORTHO05D008141 1.1e-40 170.2 120 71.7
Migut.L00456 Erythranthe guttata HOM05D006597 ORTHO05D008141 1.5e-40 169.9 142 66.2
Aqoxy3G00058 Aquilegia oxysepala HOM05D006597 ORTHO05D008141 2.5e-40 169.1 120 70.8
AL7G50500 Arabidopsis lyrata HOM05D006597 ORTHO05D008141 2.5e-40 169.1 129 68.2
MD02G1289900 Malus domestica HOM05D006597 ORTHO05D008141 2.5e-40 169.1 118 74.6
Prupe.7G052900 Prunus persica HOM05D006597 ORTHO05D008141 2.5e-40 169.1 118 74.6
Gohir.A07G078800 Gossypium hirsutum HOM05D006597 ORTHO05D008141 3.3e-40 168.7 118 72.9
FAN06G5124 Fragaria x ananassa HOM05D006597 ORTHO05D008141 4.3e-40 168.3 125 72.0
Gohir.D07G083900 Gossypium hirsutum HOM05D006597 ORTHO05D008141 4.3e-40 168.3 118 72.9
Gorai.001G089500 Gossypium raimondii HOM05D006597 ORTHO05D008141 4.3e-40 168.3 118 72.9
Atru.chr1.1862 Acer truncatum HOM05D006597 ORTHO05D008141 5.6e-40 167.9 126 69.0
CiPaw.03G070700 Carya illinoinensis HOM05D006597 ORTHO05D008141 7.3e-40 167.5 120 72.5
TAR374G1305 Trochodendron aralioides HOM05D006597 ORTHO05D008141 7.3e-40 167.5 118 72.0
GSVIVG01030813001 Vitis vinifera HOM05D006597 ORTHO05D008141 9.5e-40 167.2 120 71.7
Ciclev10012334m.g Citrus clementina HOM05D006597 ORTHO05D008141 1.6e-39 166.4 120 73.3
Thhalv10027873m.g Eutrema salsugineum HOM05D006597 ORTHO05D008141 1.6e-39 166.4 129 67.4
FvH4_7g02800 Fragaria vesca HOM05D006597 ORTHO05D008141 2.1e-39 166.0 125 71.2
Glyma.18G039800 Glycine max HOM05D006597 ORTHO05D008141 2.8e-39 165.6 120 70.8
Lj2A430G17 Lonicera japonica HOM05D006597 ORTHO05D008141 2.8e-39 165.6 123 69.1
Manes.02G075700 Manihot esculenta HOM05D006597 ORTHO05D008141 2.8e-39 165.6 120 71.7
MD07G1037100 Malus domestica HOM05D006597 ORTHO05D008141 6.2e-39 164.5 118 72.0
FAN03G1163 Fragaria x ananassa HOM05D006597 ORTHO05D008141 8.1e-39 164.1 118 73.7
Cc07_g08000 Coffea canephora HOM05D006597 ORTHO05D008141 1.4e-38 163.3 136 62.5
Lalb_Chr18g0053401 Lupinus albus HOM05D006597 ORTHO05D008141 1.4e-38 163.3 134 61.2
Medtr3g065930 Medicago truncatula HOM05D006597 ORTHO05D008141 1.4e-38 163.3 118 69.5
THA.LOC104805614 Tarenaya hassleriana HOM05D006597 ORTHO05D008141 1.4e-38 163.3 126 69.0
TPR.G14059 Trifolium pratense HOM05D006597 ORTHO05D008141 1.4e-38 163.3 129 65.9
Hma1.2p1_2448F.1_g322330 Hydrangea macrophylla HOM05D006597 ORTHO05D008141 1.8e-38 162.9 121 69.4
arahy.Tifrunner.gnm1.ann1.B6CCGS Arachis hypogaea HOM05D006597 ORTHO05D008141 2.3e-38 162.5 121 67.8
arahy.Tifrunner.gnm1.ann1.VDX6J0 Arachis hypogaea HOM05D006597 ORTHO05D008141 3.1e-38 162.2 120 67.5
QL02p057713 Quercus lobata HOM05D006597 ORTHO05D008141 3.1e-38 162.2 130 68.5
Carub.0007s3596 Capsella rubella HOM05D006597 ORTHO05D008141 4.0e-38 161.8 129 65.1
CAN.G1061.39 Capsicum annuum HOM05D006597 ORTHO05D008141 4.0e-38 161.8 132 62.9
Hma1.2p1_2448F.1_g322335 Hydrangea macrophylla HOM05D006597 ORTHO05D008141 4.0e-38 161.8 120 69.2
Psat5g122160 Pisum sativum HOM05D006597 ORTHO05D008141 4.0e-38 161.8 123 65.9
A04p12510 Brassica napus HOM05D006597 ORTHO05D008141 5.2e-38 161.4 129 64.3
Potri.017G125400 Populus trichocarpa HOM05D006597 ORTHO05D008141 5.2e-38 161.4 132 65.2
RcHm_v2.0_Chr1g0323231 Rosa chinensis HOM05D006597 ORTHO05D008141 5.2e-38 161.4 118 72.9
vmacro23322 Vaccinium macrocarpon HOM05D006597 ORTHO05D008141 5.2e-38 161.4 134 65.7
FAN10G4184 Fragaria x ananassa HOM05D006597 ORTHO05D008141 8.9e-38 160.6 118 72.0
Aa31LG9G16360 Aethionema arabicum HOM05D006597 ORTHO05D008141 1.2e-37 160.2 129 65.1
Lj6g0007596 Lotus japonicus HOM05D006597 ORTHO05D008141 1.2e-37 160.2 123 65.9
Nn4g24232 Nelumbo nucifera HOM05D006597 ORTHO05D008141 1.2e-37 160.2 135 60.7
Glyma.11G216800 Glycine max HOM05D006597 ORTHO05D008141 1.5e-37 159.8 120 68.3
BcaB06g27377 Brassica carinata HOM05D006597 ORTHO05D008141 2.0e-37 159.5 129 63.6
C04p46260 Brassica napus HOM05D006597 ORTHO05D008141 2.0e-37 159.5 129 63.6
Peaxi162Scf01159g00228 Petunia axillaris HOM05D006597 ORTHO05D008141 2.6e-37 159.1 120 67.5
CARHR262440 Cardamine hirsuta HOM05D006597 ORTHO05D008141 3.4e-37 158.7 129 64.3
Zm00001eb231700 Zea mays HOM05D006597 ORTHO05D008141 3.4e-37 158.7 126 63.5
Sabra17G0105600 Salix brachista HOM05D006597 ORTHO05D008141 4.4e-37 158.3 117 70.9
SalBow7G2937 Salvia bowleyana HOM05D006597 ORTHO05D008141 5.8e-37 157.9 118 70.3
Nitab4.5_0011641g0010 Nicotiana tabacum HOM05D006597 ORTHO05D008141 7.5e-37 157.5 120 69.2
Os02g0135900 Oryza sativa ssp. japonica HOM05D006597 ORTHO05D008141 7.5e-37 157.5 126 63.5
BraA04t16911Z Brassica rapa HOM05D006597 ORTHO05D008141 1.7e-36 156.4 131 63.4
Rhsim10G0080600 Rhododendron simsii HOM05D006597 ORTHO05D008141 1.7e-36 156.4 143 62.9
Phvul.001G230700 Phaseolus vulgaris HOM05D006597 ORTHO05D008141 2.9e-36 155.6 120 66.7
BolC4t26210H Brassica oleracea HOM05D006597 ORTHO05D008141 6.4e-36 154.5 131 62.6
MELO3C020256.2 Cucumis melo HOM05D006597 ORTHO05D008141 6.4e-36 154.5 120 65.0
CsaV3_3G021180 Cucumis sativus L. HOM05D006597 ORTHO05D008141 8.3e-36 154.1 120 64.2
Solyc02g091530.4 Solanum lycopersicum HOM05D006597 ORTHO05D008141 1.1e-35 153.7 118 65.3
PGSC0003DMG400030609 Solanum tuberosum HOM05D006597 ORTHO05D008141 1.1e-35 153.7 118 65.3
PSO017G3284 Papaver somniferum HOM05D006597 ORTHO05D008141 2.4e-35 152.5 126 61.9
PSO478G0171 Papaver somniferum HOM05D006597 ORTHO05D008141 3.2e-35 152.1 126 62.7
Sed0021212 Sechium edule HOM05D006597 ORTHO05D008141 5.4e-35 151.4 120 63.3
TWI53G1911 Tripterygium wilfordii HOM05D006597 ORTHO05D008141 7.1e-35 151.0 120 65.8
Haze_14242 Corylus avellana HOM05D006597 ORTHO05D008141 2.1e-34 149.4 152 57.9
Haze_14245 Corylus avellana HOM05D006597 ORTHO05D008141 2.1e-34 149.4 152 57.9
Oeu050986.2 Olea europaea HOM05D006597 ORTHO05D008141 2.1e-34 149.4 172 51.7
ECA232G4064 Erigeron canadensis HOM05D006597 ORTHO05D008141 7.8e-34 147.5 120 65.0
unitig_32.g11880 Utricularia gibba HOM05D006597 ORTHO05D008141 2.3e-33 146.0 129 61.2
DCAR_010755 Daucus carota HOM05D006597 ORTHO05D008141 3.0e-33 145.6 118 62.7
HanXRQChr09g0262181 Helianthus annuus HOM05D006597 ORTHO05D008141 6.6e-33 144.4 123 63.4
Actinidia37172 Actinidia chinensis HOM05D006597 ORTHO05D008141 1.6e-31 139.8 118 66.1
Lsat_1_v5_gn_4_157700 Lactuca sativa HOM05D006597 ORTHO05D008141 2.1e-31 139.4 146 56.2
vmacro22382 Vaccinium macrocarpon HOM05D006597 ORTHO05D008141 2.8e-31 139.0 130 60.8
ATR0681G203 Amborella trichopoda HOM05D006597 ORTHO05D008141 6.2e-31 137.9 119 57.1
COL.COLO4_00245 Corchorus olitorius HOM05D006597 ORTHO05D008141 1.5e-29 133.3 120 62.5
CDE06G1942 Ceratophyllum demersum HOM05D006597 ORTHO05D008141 2.6e-29 132.5 118 59.3
CDE04G0866 Ceratophyllum demersum HOM05D006597 ORTHO05D008141 1.3e-28 130.2 118 55.9
EL10Ac2g03151 Beta vulgaris HOM05D006597 ORTHO05D008141 1.7e-28 129.8 131 59.5
CSS0036940 Camellia sinensis var. sinensis HOM05D006597 ORTHO05D008141 1.1e-27 127.1 89 73.0
Nitab4.5_0004472g0030 Nicotiana tabacum HOM05D006597 ORTHO05D008141 1.6e-26 123.2 198 42.4
ClCG05G011250 Citrullus lanatus HOM05D006597 ORTHO05D008141 3.5e-26 122.1 121 56.2
SEGI_39726 Sequoiadendron giganteum HOM05D006597 ORTHO05D008141 6.0e-26 121.3 118 55.9
Ca_08157_v3 Cicer arietinum L. HOM05D006597 ORTHO05D008141 1.0e-25 120.6 89 66.3
FAN01G1326 Fragaria x ananassa HOM05D006597 ORTHO05D008141 5.1e-25 118.2 89 69.7
vmacro05527 Vaccinium macrocarpon HOM05D006597 ORTHO05D008141 1.5e-24 116.7 119 58.8
AT5G39790 Arabidopsis thaliana HOM05D006597 ORTHO05D008141 8.1e-23 110.9 99 62.6
Sopen02g036150 Solanum pennellii HOM05D006597 ORTHO05D008141 7.6e-21 104.4 81 60.5
VMungo1383G0070 Vigna mungo HOM05D006597 ORTHO05D008141 8.4e-20 100.9 67 73.1
Mapoly0074s0064 Marchantia polymorpha HOM05D006597 ORTHO05D008141 8.7e-17 90.9 116 44.0
Pp3c14_11030 Physcomitrium patens HOM05D006597 ORTHO05D008141 2.5e-16 89.4 115 41.7
Pp3c1_28320 Physcomitrium patens HOM05D006597 ORTHO05D008141 1.2e-13 80.5 109 42.2
RcHm_v2.0_Chr1g0322821 Rosa chinensis HOM05D006597 ORTHO05D008141 3.8e-12 75.5 48 81.2
HPP92_003922 Vanilla planifolia HOM05D006597 ORTHO05D008141 3.8e-12 75.5 67 62.7
VMungo1383G1559 Vigna mungo HOM05D006597 ORTHO05D008141 6.0e-10 68.2 55 63.6
SpUn1104_0010 Schrenkiella parvula HOM05D006597 ORTHO05D008141 5.1e-09 65.1 64 50.0
CBR_g3895 Chara braunii HOM05D006597 ORTHO05D008141 1.1e-08 63.9 87 47.1


User provided reference genes

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