Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14849 Selenicereus undatus HOM05D009900 ORTHO05D011543 0.0e+00 1216.4 648 100.0
Hund02732 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.3e-234 815.8 624 73.6
Hund24775 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.5e-220 769.2 607 70.0
Hund04136 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.6e-211 740.0 578 72.3
Hund14858 Selenicereus undatus HOM05D009900 ORTHO05D011543 7.5e-193 677.9 525 70.3
Hund12772 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.9e-120 436.8 391 65.7
Hund14851 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.1e-111 408.3 290 73.8
Hund26514 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.2e-110 404.8 382 60.2
Hund14852 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.4e-109 401.4 344 65.4
Hund17813 Selenicereus undatus HOM05D009900 ORTHO05D011543 5.7e-108 396.0 367 62.4
Hund20056 Selenicereus undatus HOM05D009900 ORTHO05D011543 4.5e-105 386.3 348 64.1
Hund20374 Selenicereus undatus HOM05D009900 ORTHO05D011543 2.1e-78 297.7 184 83.2
Hund03987 Selenicereus undatus HOM05D009900 ORTHO05D011543 6.8e-77 292.7 272 59.6
Hund12639 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.1e-74 285.4 309 55.3
Hund12535 Selenicereus undatus HOM05D009900 ORTHO05D011543 5.7e-68 263.1 368 46.2
Hund23398 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.0e-56 225.7 371 41.2
ECA248G1144 Erigeron canadensis HOM05D009609 ORTHO05D011572 1.9e-39 168.3 311 35.0
Hund04161 Selenicereus undatus HOM05D009900 ORTHO05D011543 1.4e-34 152.1 222 44.1
Hund26264 Selenicereus undatus HOM05D022016 ORTHO05D011543 5.4e-34 150.2 347 32.0
Hund08112 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.3e-32 145.6 425 29.4
Hund26263 Selenicereus undatus HOM05D009900 ORTHO05D011543 6.6e-32 143.3 219 35.6
Hund01689 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.5e-31 142.1 425 29.6
Hund24322 Selenicereus undatus HOM05D009900 ORTHO05D011543 3.3e-31 141.0 84 83.3
Hund24321 Selenicereus undatus HOM05D009900 ORTHO05D011543 7.3e-31 139.8 78 89.7
Sc17g0003390 Simmondsia chinensis HOM05D009609 ORTHO05D011572 3.8e-27 127.5 357 29.1
Hund28780 Selenicereus undatus HOM05D009609 ORTHO05D011572 4.9e-27 127.1 358 29.1
Hund28782 Selenicereus undatus HOM05D009609 ORTHO05D011572 4.9e-27 127.1 358 29.1
Sc26g0002750 Simmondsia chinensis HOM05D009609 ORTHO05D011572 5.4e-26 123.6 253 31.2
Ah.14g081560 Amaranthus hybridus HOM05D009900 ORTHO05D011543 9.3e-26 122.9 260 33.1
Hund04460 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.6e-25 122.1 358 29.1
Hund03874 Selenicereus undatus HOM05D009609 ORTHO05D011572 3.0e-24 117.9 283 31.1
Ah.14g084400 Amaranthus hybridus HOM05D009900 ORTHO05D011543 1.5e-23 115.5 432 26.4
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 5.6e-23 113.6 295 28.5
Sc21g0002860 Simmondsia chinensis HOM05D009609 ORTHO05D011572 1.6e-22 112.1 327 30.0
Sc25g0001390 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.1e-22 111.7 339 28.6
SalBow4G3179 Salvia bowleyana HOM05D009900 ORTHO05D050797 4.0e-21 107.5 174 35.1
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 9.0e-21 106.3 272 28.7
Hund17497 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.5e-20 105.5 296 27.0
ECA236G1122 Erigeron canadensis HOM05D009609 ORTHO05D011572 2.6e-20 104.8 317 29.7
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 2.9e-19 101.3 324 26.2
EL10Ac7g16607 Beta vulgaris HOM05D001385 ORTHO05D008760 3.8e-19 100.9 314 27.1
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-18 99.4 323 25.7
Sc25g0003740 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.4e-18 98.2 194 36.6
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 3.2e-18 97.8 324 25.9
Ah.05g177810 Amaranthus hybridus HOM05D001385 ORTHO05D002073 7.1e-18 96.7 263 28.5
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.1e-18 96.7 300 26.3
Hund18060 Selenicereus undatus HOM05D009609 ORTHO05D011572 9.3e-18 96.3 289 28.4
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.3e-16 92.4 300 25.7
Hund12908 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.3e-16 92.4 281 26.0
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.3e-16 92.4 301 26.6
Ah.04g157650 Amaranthus hybridus HOM05D009900 ORTHO05D011543 1.8e-16 92.0 87 48.3
Hund28976 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.3e-16 91.7 299 26.4
Hund28977 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.3e-16 91.7 299 26.4
Hund29980 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.3e-16 91.7 299 26.4
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-16 91.3 299 26.1
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 5.1e-16 90.5 280 27.9
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 2.5e-15 88.2 272 25.4
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 2.5e-15 88.2 295 27.5
Sc01g0005370 Simmondsia chinensis HOM05D009609 ORTHO05D011572 4.3e-15 87.4 357 24.6
Hund22617 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.4e-15 86.7 300 25.0
Hund13048 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.6e-15 86.3 301 26.2
Hund26531 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.6e-15 86.3 300 25.7
Hund28568 Selenicereus undatus HOM05D036986 ORTHO05D011543 1.6e-14 85.5 128 33.6
Hund29759 Selenicereus undatus HOM05D036986 ORTHO05D011543 1.6e-14 85.5 128 33.6
Hund30796 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.7e-14 84.3 246 27.6
TWI75G0500 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.7e-14 84.3 368 26.9
Hund01655 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.8e-14 84.0 281 25.6
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 4.0e-13 80.9 245 24.9
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 5.3e-13 80.5 329 24.6
Hund20142 Selenicereus undatus HOM05D001385 ORTHO05D008760 6.9e-13 80.1 315 27.6
Hund01077 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.0e-13 79.7 303 25.1
Hund14635 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.2e-12 79.3 300 24.0
Hund01500 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.5e-12 79.0 300 25.0
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 3.4e-12 77.8 333 24.6
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 5.8e-12 77.0 333 24.6
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 5.8e-12 77.0 333 24.6
Hund23587 Selenicereus undatus HOM05D022016 ORTHO05D011543 9.9e-12 76.3 225 26.2
Hund03850 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.2e-11 75.1 298 24.2
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.9e-11 74.7 278 25.5
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.8e-11 74.3 333 25.2
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 4.9e-11 73.9 206 27.7
AUR62026509 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.9e-11 73.9 272 23.2
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 6.4e-11 73.6 272 25.4
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 6.4e-11 73.6 369 21.7
EL10Ac4g08588 Beta vulgaris HOM05D008595 ORTHO05D010945 8.4e-11 73.2 279 24.7
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-10 72.8 317 22.1
Hund14776 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.4e-10 72.4 229 26.6
Hund07415 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.9e-10 72.0 307 26.1
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 1.9e-10 72.0 292 23.6
EL10Ac7g16685 Beta vulgaris HOM05D008595 ORTHO05D010945 2.5e-10 71.6 274 25.5
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-10 71.6 320 22.5
EL10Ac3g06761 Beta vulgaris HOM05D008595 ORTHO05D010945 3.2e-10 71.2 274 25.2
EL10Ac3g06763 Beta vulgaris HOM05D008595 ORTHO05D010945 3.2e-10 71.2 274 25.2
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.2e-10 71.2 265 22.3
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 4.2e-10 70.9 274 25.2
EL10Ac8g19368 Beta vulgaris HOM05D008595 ORTHO05D010945 4.2e-10 70.9 284 23.9
BraA06t25453Z Brassica rapa HOM05D008309 ORTHO05D010308 4.2e-10 70.9 332 23.5
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 4.2e-10 70.9 129 37.2
EL10Ac5g11789 Beta vulgaris HOM05D008595 ORTHO05D010945 5.5e-10 70.5 274 25.2
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 5.5e-10 70.5 281 24.2
Hund24360 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.5e-10 70.5 208 26.9
Hund27434 Selenicereus undatus HOM05D004066 ORTHO05D004434 5.5e-10 70.5 298 23.8
EL10Ac2g03126 Beta vulgaris HOM05D008595 ORTHO05D010945 9.3e-10 69.7 272 24.6
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.3e-10 69.7 290 22.1
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-09 69.3 290 22.1
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-09 69.3 317 21.8
Hund19989 Selenicereus undatus HOM05D041637 ORTHO05D030589 1.2e-09 69.3 223 29.6
EL10Ac5g11379 Beta vulgaris HOM05D008595 ORTHO05D010945 1.6e-09 68.9 281 23.8
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.6e-09 68.9 275 22.2
EL10Ac5g11498 Beta vulgaris HOM05D008595 ORTHO05D010945 2.1e-09 68.6 274 24.8
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-09 68.6 359 23.1
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 2.1e-09 68.6 305 24.3
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-09 68.6 290 22.1
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-09 68.6 290 22.1
Hund22136 Selenicereus undatus HOM05D001385 ORTHO05D004434 2.1e-09 68.6 177 32.2
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.7e-09 68.2 275 21.5
Hund30132 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-09 68.2 229 26.2
Hund30727 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-09 68.2 229 26.2
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.7e-09 68.2 336 21.4
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.7e-09 68.2 336 21.4
Hund20387 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.5e-09 67.8 237 25.7
Hund23677 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.5e-09 67.8 301 25.2
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 4.6e-09 67.4 336 21.4
EL10Ac5g11465 Beta vulgaris HOM05D008595 ORTHO05D010945 6.0e-09 67.0 278 23.7
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.0e-09 67.0 290 22.4
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 7.9e-09 66.6 308 24.0
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 7.9e-09 66.6 263 23.2
AUR62040186 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.0e-08 66.2 100 39.0
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.3e-08 65.9 284 25.0
FAN08G2751 Fragaria x ananassa HOM05D008315 ORTHO05D009452 1.3e-08 65.9 259 24.3
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.8e-08 65.5 348 24.4
COL.COLO4_33862 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.8e-08 65.5 111 34.2
Sc02g0007440 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.3e-08 65.1 154 35.1
EL10Ac1g01792 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-08 64.7 281 23.5
EL10Ac5g10887 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-08 64.7 281 23.8
EL10Ac5g11175 Beta vulgaris HOM05D008595 ORTHO05D010945 5.1e-08 63.9 270 25.6
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 5.1e-08 63.9 340 24.4
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 5.1e-08 63.9 336 20.8
EL10Ac5g11348 Beta vulgaris HOM05D008595 ORTHO05D010945 6.7e-08 63.5 278 24.5
C04p50470 Brassica napus HOM05D008309 ORTHO05D010308 6.7e-08 63.5 357 22.1
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 6.7e-08 63.5 326 22.7
EL10Ac3g06466 Beta vulgaris HOM05D008595 ORTHO05D010945 8.7e-08 63.2 268 24.3
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.7e-08 63.2 327 21.4
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 8.7e-08 63.2 291 24.7
Hund18668 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.7e-08 63.2 222 28.4
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 1.1e-07 62.8 306 23.5
EL10Ac9g20868 Beta vulgaris HOM05D008595 ORTHO05D010945 1.1e-07 62.8 245 24.5
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.1e-07 62.8 344 24.4
EL10Ac1g02242 Beta vulgaris HOM05D008595 ORTHO05D010945 1.5e-07 62.4 269 24.9
EL10Ac6g14350 Beta vulgaris HOM05D008595 ORTHO05D010945 1.5e-07 62.4 269 23.8
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.9e-07 62.0 290 21.0
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 1.9e-07 62.0 313 25.2
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.9e-07 62.0 286 22.7
Hund15195 Selenicereus undatus HOM05D009609 ORTHO05D011572 1.9e-07 62.0 127 31.5
EL10Ac6g14559 Beta vulgaris HOM05D008595 ORTHO05D010945 2.5e-07 61.6 251 23.9
TAR374G1143 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-07 61.6 286 26.2
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 3.3e-07 61.2 299 25.1
COL.COLO4_29078 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.3e-07 60.8 273 23.1
Hund30625 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.3e-07 60.8 232 27.2
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 5.6e-07 60.5 287 22.3
Os02g0129000 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 7.4e-07 60.1 322 23.3
Hund16835 Selenicereus undatus HOM05D004066 ORTHO05D004434 9.6e-07 59.7 222 26.6
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 1.3e-06 59.3 321 23.4
BolC4t26644H Brassica oleracea HOM05D008309 ORTHO05D010308 1.6e-06 58.9 289 23.2
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 2.1e-06 58.5 288 23.3
Os07g0212400 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 2.1e-06 58.5 311 23.5
RcHm_v2.0_Chr2g0136581 Rosa chinensis HOM05D008315 ORTHO05D009452 2.1e-06 58.5 261 24.9
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-06 58.5 364 21.4
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.8e-06 58.2 222 21.6
EL10Ac8g19872 Beta vulgaris HOM05D008595 ORTHO05D010945 3.7e-06 57.8 292 22.6
Hund18251 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.7e-06 57.8 243 25.1
Sc10g0007550 Simmondsia chinensis HOM05D062983 ORTHO05D011572 3.7e-06 57.8 249 27.7
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.8e-06 57.4 320 21.6
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.8e-06 57.4 271 20.3
EL10Ac5g11888 Beta vulgaris HOM05D008595 ORTHO05D009929 6.2e-06 57.0 237 24.5
CANSAT35G0020 Cannabis sativa HOM05D001309 ORTHO05D000385 6.2e-06 57.0 271 24.4
AUR62042649 Chenopodium quinoa HOM05D001385 ORTHO05D000062 6.2e-06 57.0 91 39.6
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-06 57.0 278 25.9
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-06 57.0 278 25.9
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-06 57.0 278 25.9
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-06 57.0 278 25.9
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 6.2e-06 57.0 278 25.9
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.2e-06 57.0 267 24.3


User provided reference genes

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