Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 2.1e-174 615.5 299 100.0
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 7.5e-156 553.9 294 89.8
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 9.5e-151 537.0 299 84.9
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 9.5e-151 537.0 299 85.3
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 2.1e-150 535.8 302 86.4
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.8e-149 532.7 299 86.6
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 4.0e-149 531.6 299 84.3
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.7e-147 526.2 299 81.9
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 2.9e-147 525.4 298 83.6
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 3.7e-147 525.0 298 83.2
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.7e-147 525.0 299 83.6
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 8.3e-147 523.9 295 83.1
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 3.2e-146 521.9 299 82.9
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 4.1e-146 521.5 299 82.9
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 9.2e-146 520.4 300 81.3
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 2.0e-145 519.2 296 82.8
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 2.0e-145 519.2 299 81.6
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.7e-145 518.8 299 82.3
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 3.5e-145 518.5 300 82.7
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 4.6e-145 518.1 299 80.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 1.0e-144 516.9 299 82.6
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.3e-144 516.5 295 82.0
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 2.3e-144 515.8 300 81.0
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.0e-144 514.6 302 79.8
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.0e-144 514.6 302 79.8
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 6.6e-144 514.2 295 82.0
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 8.6e-144 513.8 300 81.0
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 1.1e-143 513.5 298 81.5
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.1e-143 513.5 298 80.2
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.1e-143 513.5 296 81.1
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 1.5e-143 513.1 300 83.0
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 1.9e-143 512.7 300 80.3
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 1.9e-143 512.7 298 82.2
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 2.5e-143 512.3 298 79.9
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 3.3e-143 511.9 311 78.5
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.3e-143 511.9 298 79.9
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 5.6e-143 511.1 301 81.1
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 5.6e-143 511.1 295 81.7
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 9.5e-143 510.4 298 80.5
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 9.5e-143 510.4 300 80.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 1.2e-142 510.0 300 80.3
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 2.1e-142 509.2 298 79.9
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 3.6e-142 508.4 295 81.4
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 6.2e-142 507.7 301 79.1
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 8.1e-142 507.3 300 80.0
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.8e-141 506.1 300 79.7
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 4.0e-141 505.0 300 79.3
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 5.2e-141 504.6 297 79.1
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 6.8e-141 504.2 296 79.1
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.0e-140 502.7 300 79.7
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 5.8e-140 501.1 303 79.9
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.2e-139 499.2 313 76.0
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 2.9e-139 498.8 296 76.4
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 4.9e-139 498.0 301 79.7
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 6.4e-139 497.7 299 78.3
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 6.4e-139 497.7 319 76.2
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.9e-138 496.1 296 76.0
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 9.2e-138 493.8 296 76.0
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 1.6e-137 493.0 296 75.3
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.1e-137 492.7 293 77.1
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 2.7e-137 492.3 297 77.8
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 4.6e-137 491.5 296 75.3
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 7.8e-137 490.7 271 83.4
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 1.0e-136 490.3 293 76.8
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 1.3e-136 490.0 293 76.8
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 3.0e-136 488.8 300 76.7
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 5.1e-136 488.0 293 76.5
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 5.1e-136 488.0 293 76.5
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 5.1e-136 488.0 320 74.7
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 5.1e-136 488.0 296 75.3
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 6.6e-136 487.6 298 76.5
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 9.5e-135 483.8 296 75.7
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 1.6e-134 483.0 295 75.3
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 6.2e-134 481.1 293 75.8
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 1.4e-133 479.9 301 74.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.5e-132 476.5 347 66.9
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 4.4e-132 474.9 299 72.9
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 7.6e-132 474.2 318 70.4
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 4.9e-131 471.5 298 72.8
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 6.4e-131 471.1 338 70.1
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 1.1e-130 470.3 298 71.8
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 2.4e-130 469.2 296 72.0
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 5.4e-130 468.0 295 73.6
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 7.8e-129 464.2 294 74.1
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.3e-128 463.4 260 82.7
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 5.1e-128 461.5 298 71.1
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 2.5e-127 459.1 301 72.8
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 8.1e-126 454.1 288 74.7
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.1e-125 453.8 291 71.1
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 3.1e-125 452.2 266 78.2
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 1.7e-123 446.4 297 73.7
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 3.9e-120 435.3 298 72.1
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.6e-113 413.3 292 68.8
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.3e-104 383.6 298 61.1
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 4.3e-103 378.6 221 78.3
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 4.9e-99 365.2 199 86.9
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.9e-98 363.2 285 60.7
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 4.3e-95 352.1 291 59.8
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.7e-95 351.7 284 59.9
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.8e-93 346.7 204 78.9
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.4e-85 319.7 199 75.4
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 2.1e-81 306.6 185 74.1
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 4.7e-73 278.9 167 79.0
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 3.3e-71 272.7 258 52.7
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.7e-62 243.8 152 73.0
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 6.3e-62 241.9 142 79.6
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 4.1e-53 212.6 148 68.9
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.5e-50 203.4 142 71.8
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 2.3e-40 170.2 111 72.1
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 4.9e-38 162.5 102 73.5
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 2.4e-29 133.7 118 60.2
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.2e-28 131.3 329 26.7
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 3.5e-28 129.8 78 76.9
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.6e-28 129.4 87 74.7
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 3.3e-26 123.2 73 78.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 2.8e-25 120.2 299 26.8
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.3e-24 117.1 72 79.2
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 3.4e-23 113.2 325 26.2
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 2.7e-12 77.0 41 87.8


User provided reference genes

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