Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 2.6e-228 795.0 405 100.0
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 2.0e-135 486.5 346 70.5
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 5.8e-135 485.0 346 70.2
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 7.6e-127 458.0 369 62.3
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 5.4e-125 451.8 337 65.0
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 1.3e-118 430.6 371 60.1
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 6.0e-116 421.8 334 62.9
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 6.0e-116 421.8 334 62.6
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 7.9e-116 421.4 340 60.9
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 5.1e-115 418.7 336 64.9
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 3.3e-114 416.0 337 60.8
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 3.3e-114 416.0 335 62.4
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 3.3e-114 416.0 335 61.2
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 7.4e-114 414.8 358 61.2
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 1.6e-113 413.7 335 60.9
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 2.8e-113 412.9 340 59.7
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 3.7e-113 412.5 335 63.0
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 4.8e-113 412.1 334 62.0
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 8.2e-113 411.4 341 61.6
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 1.1e-112 411.0 341 59.5
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 1.4e-112 410.6 334 61.7
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.4e-112 410.6 334 63.2
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 1.8e-112 410.2 335 60.6
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 1.8e-112 410.2 334 62.3
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 1.8e-112 410.2 355 60.3
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 3.1e-112 409.5 333 59.8
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 4.0e-112 409.1 334 61.1
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 5.3e-112 408.7 338 58.9
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 5.3e-112 408.7 338 60.1
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 1.2e-111 407.5 340 59.1
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 1.5e-111 407.1 334 61.4
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 1.5e-111 407.1 337 62.3
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 2.0e-111 406.8 340 60.0
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 3.4e-111 406.0 335 60.3
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 3.4e-111 406.0 340 60.0
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 3.4e-111 406.0 333 59.2
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 3.4e-111 406.0 348 61.5
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 4.5e-111 405.6 342 59.4
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 7.6e-111 404.8 366 56.3
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 1.0e-110 404.4 335 61.2
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 1.0e-110 404.4 363 59.2
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 4.9e-110 402.1 336 58.9
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.1e-109 401.0 368 56.2
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 1.9e-109 400.2 336 59.8
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 1.9e-109 400.2 343 59.8
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 5.5e-109 398.7 341 60.1
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 7.1e-109 398.3 334 60.2
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 9.3e-109 397.9 372 53.8
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 9.3e-109 397.9 338 56.8
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 9.3e-109 397.9 338 57.7
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 9.3e-109 397.9 323 61.3
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 9.3e-109 397.9 329 59.0
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 2.1e-108 396.7 338 58.3
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 2.1e-108 396.7 372 54.6
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 2.7e-108 396.4 365 55.6
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 2.7e-108 396.4 369 55.8
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 2.7e-108 396.4 333 61.3
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 3.5e-108 396.0 338 57.1
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 4.6e-108 395.6 358 58.1
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 1.0e-107 394.4 338 56.2
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 1.3e-107 394.0 338 56.2
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 3.0e-107 392.9 338 55.9
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 3.9e-107 392.5 340 57.9
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 8.7e-107 391.3 335 58.5
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 8.7e-107 391.3 356 56.7
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 1.5e-106 390.6 371 53.1
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 2.5e-106 389.8 366 55.5
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 3.3e-106 389.4 335 58.2
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 5.7e-106 388.7 346 57.8
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 5.7e-106 388.7 363 57.0
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 7.4e-106 388.3 336 57.1
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 9.7e-106 387.9 351 55.6
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 1.6e-105 387.1 337 57.6
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 6.3e-105 385.2 334 59.6
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 2.0e-103 380.2 337 56.7
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 1.3e-102 377.5 340 55.3
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 3.8e-102 375.9 344 55.5
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 5.0e-102 375.6 371 54.4
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 7.2e-101 371.7 368 53.0
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 7.2e-101 371.7 368 53.0
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 9.4e-101 371.3 387 51.2
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 3.0e-99 366.3 337 55.8
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 3.9e-99 365.9 337 54.9
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 5.1e-99 365.5 337 55.5
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 2.8e-97 359.8 372 51.6
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 1.5e-95 354.0 291 61.9
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 2.6e-95 353.2 355 52.4
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 1.4e-91 340.9 367 51.5
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 1.4e-91 340.9 341 54.0
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 2.2e-89 333.6 327 54.1
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 3.4e-87 326.2 333 52.0
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 8.5e-86 321.6 463 40.6
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 2.5e-85 320.1 303 54.1
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 1.3e-81 307.8 368 47.3
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 2.8e-81 306.6 334 49.4
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 1.2e-79 301.2 280 56.4
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 1.0e-75 288.1 334 47.6
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.4e-75 287.7 298 50.0
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 8.2e-73 278.5 334 47.0
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 3.1e-72 276.6 206 68.0
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 2.1e-68 263.8 333 42.3
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 3.6e-68 263.1 337 43.6
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 8.8e-67 258.5 538 32.2
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 5.7e-66 255.8 330 44.8
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 2.8e-65 253.4 389 36.8
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 1.0e-62 245.0 450 35.1
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.1e-61 241.5 400 35.8
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 4.0e-59 233.0 398 35.9
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 9.2e-56 221.9 252 46.0
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.2e-55 221.5 370 35.7
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 7.8e-55 218.8 370 36.2
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 1.3e-54 218.0 155 65.8
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 8.6e-54 215.3 151 66.2
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 8.0e-52 208.8 142 71.1
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 1.9e-45 187.6 165 57.6
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 5.6e-45 186.0 117 72.6
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 8.1e-36 155.6 100 78.0
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 5.2e-35 152.9 255 35.7
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 1.4e-24 118.2 126 51.6
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 3.8e-17 93.6 136 37.5
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 5.3e-11 73.2 73 53.4
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 6.0e-07 59.7 78 44.9


User provided reference genes

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