Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 1.0e-292 1010.0 792 100.0
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.3e-134 483.4 524 58.6
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 9.3e-129 465.3 495 59.8
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.0e-127 460.3 524 57.8
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 3.7e-117 426.8 362 69.1
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 8.2e-117 425.6 362 67.1
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 4.1e-116 423.3 367 66.8
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 9.0e-116 422.2 544 53.7
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 2.6e-115 420.6 365 69.3
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 7.6e-115 419.1 361 68.1
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 7.6e-115 419.1 361 67.9
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 1.3e-114 418.3 489 47.9
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.8e-114 416.8 361 69.5
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 5.0e-114 416.4 363 67.8
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 6.5e-114 416.0 362 68.8
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.4e-113 414.8 362 69.6
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 7.2e-113 412.5 486 44.9
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 9.3e-113 412.1 361 56.0
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.2e-112 411.8 362 68.2
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 2.1e-112 411.0 360 70.6
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.6e-112 410.2 353 69.1
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 3.6e-112 410.2 362 70.2
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 6.1e-112 409.5 498 54.6
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 7.9e-112 409.1 363 69.1
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 1.8e-111 407.9 347 70.9
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 2.3e-111 407.5 514 54.3
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.0e-111 407.1 350 68.6
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.5e-110 404.8 472 55.3
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.9e-110 404.4 362 68.0
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 7.4e-110 402.5 351 68.1
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 9.7e-110 402.1 349 70.2
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.3e-109 401.7 363 67.5
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.3e-109 401.7 366 66.7
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 2.2e-109 401.0 359 65.5
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.8e-109 400.6 526 51.9
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 6.3e-109 399.4 502 53.2
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 6.3e-109 399.4 344 70.9
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 8.2e-109 399.1 591 73.3
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 1.8e-108 397.9 349 68.5
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.4e-108 397.5 349 68.2
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.4e-108 397.5 505 57.4
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 3.1e-108 397.1 349 68.8
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 3.1e-108 397.1 363 54.8
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 4.1e-108 396.7 487 54.0
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 5.3e-108 396.4 341 62.5
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 5.3e-108 396.4 363 66.9
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 9.1e-108 395.6 506 51.8
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 9.1e-108 395.6 349 64.8
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 9.1e-108 395.6 349 69.1
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 9.1e-108 395.6 349 69.1
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 1.5e-107 394.8 348 68.7
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 2.0e-107 394.4 349 61.3
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 3.4e-107 393.7 473 55.0
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 1.3e-106 391.7 358 68.7
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.3e-106 391.7 363 66.4
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.3e-106 391.7 348 68.4
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.3e-106 391.7 361 67.6
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.7e-106 391.3 344 69.5
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 2.2e-106 391.0 347 69.2
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 6.5e-106 389.4 363 67.8
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 6.5e-106 389.4 521 53.0
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 8.5e-106 389.0 338 69.8
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 1.4e-105 388.3 344 68.3
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.4e-105 388.3 349 67.0
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 5.5e-105 386.3 375 53.1
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 7.2e-105 386.0 344 61.6
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 9.4e-105 385.6 363 67.5
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 9.4e-105 385.6 359 61.8
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.8e-103 381.3 478 53.8
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 3.9e-103 380.2 363 63.4
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 5.1e-103 379.8 350 66.6
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 6.7e-103 379.4 364 63.2
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.1e-102 378.6 352 63.1
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 2.0e-102 377.9 329 69.9
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 2.6e-102 377.5 364 62.6
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 9.7e-102 375.6 482 52.9
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 2.2e-101 374.4 364 62.1
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 3.7e-101 373.6 364 63.2
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.8e-101 373.2 339 67.8
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 6.3e-101 372.9 334 69.5
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 6.3e-101 372.9 350 62.9
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 5.3e-100 369.8 364 64.3
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 5.3e-100 369.8 352 65.1
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.1e-100 369.0 513 50.5
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.0e-99 367.9 543 49.2
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.0e-99 367.9 543 49.2
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 1.0e-98 365.5 308 73.1
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 9.4e-97 359.0 347 63.1
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.4e-95 355.1 351 63.2
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.4e-95 355.1 351 63.2
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.9e-95 353.6 366 59.6
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 5.2e-95 353.2 360 60.3
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 8.8e-95 352.4 347 63.4
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 2.0e-94 351.3 363 59.8
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 4.4e-94 350.1 351 63.5
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 5.7e-94 349.7 351 63.2
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 6.3e-93 346.3 351 62.7
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 7.0e-92 342.8 344 64.5
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.7e-90 338.2 353 62.9
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 8.5e-90 335.9 366 58.5
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.2e-86 325.5 355 61.7
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 7.5e-70 269.6 368 42.9
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 4.1e-68 263.8 204 61.8
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.4e-60 238.8 217 55.8
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 3.3e-57 227.6 133 77.4
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.9e-44 185.3 286 40.2
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 3.0e-42 177.9 352 36.6
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 6.6e-42 176.8 379 42.7
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 2.4e-36 158.3 209 63.6
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.6e-32 145.6 374 40.9
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 1.5e-22 112.5 152 38.8
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.3e-21 109.4 62 82.3
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 2.4e-20 105.1 146 43.8


User provided reference genes

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