Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 3.4e-283 977.6 479 100.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 2.0e-235 818.9 516 78.9
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 3.9e-199 698.4 516 69.0
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 9.7e-198 693.7 526 67.5
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 2.2e-189 666.0 576 62.7
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.6e-187 659.8 529 63.7
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 7.7e-187 657.5 510 64.3
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 1.1e-185 653.7 533 61.7
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 8.0e-184 647.5 530 63.0
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 1.8e-183 646.4 522 63.0
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 6.8e-183 644.4 526 63.3
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 5.7e-182 641.3 527 62.0
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.7e-181 638.6 523 61.2
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 8.3e-181 637.5 516 63.8
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 1.8e-180 636.3 521 62.6
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 5.4e-180 634.8 513 63.0
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 7.0e-180 634.4 523 60.8
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 2.0e-179 632.9 536 61.8
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 4.5e-179 631.7 530 60.4
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 7.7e-179 630.9 525 60.8
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 2.9e-178 629.0 528 60.2
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 5.0e-178 628.2 537 60.1
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 5.0e-178 628.2 518 61.6
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 6.6e-178 627.9 535 60.4
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 8.6e-178 627.5 566 59.0
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 8.6e-178 627.5 530 60.0
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 1.1e-177 627.1 525 61.3
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 1.9e-177 626.3 525 61.0
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 2.5e-177 625.9 529 60.5
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 7.2e-177 624.4 524 60.7
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 9.5e-177 624.0 545 60.6
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.2e-176 623.6 532 60.5
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 1.2e-176 623.6 536 59.9
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 2.1e-176 622.9 531 60.5
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 2.8e-176 622.5 530 60.2
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 6.1e-176 621.3 536 59.5
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 6.1e-176 621.3 524 60.3
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 8.0e-176 620.9 526 60.3
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 4.0e-175 618.6 532 59.6
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 4.0e-175 618.6 552 58.2
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 4.0e-175 618.6 525 59.4
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 8.9e-175 617.5 531 60.5
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 1.2e-174 617.1 537 59.6
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 2.0e-174 616.3 527 60.0
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 2.6e-174 615.9 570 56.7
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 3.4e-174 615.5 521 61.6
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 4.9e-173 611.7 531 59.7
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 6.3e-173 611.3 522 60.0
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.4e-172 610.1 539 58.4
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 5.9e-171 604.7 524 59.0
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 1.0e-170 604.0 446 67.5
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 2.3e-170 602.8 521 59.1
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 2.5e-169 599.4 503 60.8
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 9.5e-169 597.4 514 59.1
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 2.3e-167 592.8 521 58.5
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 4.0e-167 592.0 522 59.4
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 8.9e-167 590.9 514 57.6
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 8.9e-167 590.9 523 58.5
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 4.4e-166 588.6 536 56.7
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 7.5e-166 587.8 541 56.9
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 2.2e-165 586.3 532 57.5
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 3.7e-165 585.5 521 58.9
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 3.7e-165 585.5 519 58.8
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.1e-164 583.9 520 57.9
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 1.1e-164 583.9 521 58.3
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 1.4e-164 583.6 520 57.9
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 1.9e-164 583.2 520 57.9
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.9e-164 583.2 516 59.7
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 4.1e-164 582.0 523 59.3
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 7.8e-163 577.8 559 54.4
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.7e-162 576.6 532 55.1
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 2.3e-162 576.2 521 57.2
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.9e-161 573.2 449 63.7
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 9.5e-161 570.9 521 57.0
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 9.5e-161 570.9 529 56.1
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 1.2e-160 570.5 554 54.5
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 8.9e-159 564.3 521 56.8
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 7.5e-158 561.2 502 58.4
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 3.2e-156 555.8 511 56.2
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 3.3e-153 545.8 474 59.5
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.5e-145 519.6 606 49.2
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 5.8e-142 508.4 517 51.3
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 2.4e-140 503.1 500 53.4
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 8.7e-138 494.6 512 53.3
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 4.9e-133 478.8 517 48.0
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 4.2e-132 475.7 529 50.3
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 3.5e-131 472.6 525 50.1
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.7e-130 470.3 517 48.0
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 5.3e-127 458.8 624 44.1
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.1e-119 434.5 516 46.3
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 3.1e-119 433.0 516 47.5
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 4.3e-113 412.5 452 51.1
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 1.2e-110 404.4 510 43.7
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 2.5e-105 386.7 300 63.0
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 1.3e-104 384.4 316 61.4
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 1.4e-98 364.4 299 59.9
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 2.2e-93 347.1 298 59.7
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 5.9e-86 322.4 549 38.3
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 2.0e-81 307.4 423 38.3
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 1.1e-76 291.6 556 36.2
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.4e-74 284.6 244 59.8
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 5.2e-74 282.7 269 55.0
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 2.7e-67 260.4 170 76.5
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 3.6e-59 233.4 207 58.0
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 4.0e-58 229.9 482 31.5
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.3e-53 214.9 199 55.3
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 2.3e-53 214.2 368 39.1
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.9e-52 211.1 199 54.3
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 3.3e-52 210.3 567 30.2
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 4.3e-52 209.9 199 54.3
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 5.6e-52 209.5 200 56.5
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 6.2e-51 206.1 200 56.5
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 3.3e-36 157.1 203 42.9
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 8.4e-32 142.5 180 46.7
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 2.3e-29 134.4 85 71.8
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 8.4e-24 115.9 132 51.5
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.1e-23 115.5 301 29.6
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 6.6e-21 106.3 420 25.7
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 3.3e-20 104.0 104 51.0
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 1.8e-13 81.6 64 62.5
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.9e-12 78.2 87 51.7
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 5.8e-09 66.6 48 66.7


User provided reference genes

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