Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 0.0e+00 1297.7 647 100.0
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.2e-182 644.0 423 77.8
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 4.1e-159 565.8 421 67.5
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.8e-155 553.1 420 66.7
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 9.9e-145 518.1 426 64.1
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 1.2e-137 494.6 427 57.6
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.4e-137 493.0 414 59.4
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.3e-136 491.1 430 57.2
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 3.8e-136 489.6 421 58.7
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.4e-135 487.6 419 58.2
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.4e-135 487.6 416 58.7
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.6e-134 484.2 418 58.1
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 2.1e-134 483.8 420 57.1
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 3.5e-134 483.0 423 57.9
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 3.5e-134 483.0 426 58.0
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 6.0e-134 482.3 419 57.3
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 6.0e-134 482.3 426 58.0
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 7.8e-134 481.9 423 57.2
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 1.0e-133 481.5 431 56.1
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 1.3e-133 481.1 417 56.4
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 8.7e-133 478.4 417 57.6
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.1e-132 478.0 425 56.9
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 1.5e-132 477.6 417 56.8
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.5e-132 477.6 419 57.3
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 1.9e-132 477.2 417 56.8
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 4.3e-132 476.1 425 56.7
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 4.3e-132 476.1 422 56.9
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 7.3e-132 475.3 419 56.6
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 9.6e-132 474.9 421 57.0
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 1.3e-131 474.6 427 55.3
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.6e-131 474.2 402 59.7
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 3.6e-131 473.0 414 57.5
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 4.8e-131 472.6 423 56.3
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.1e-130 471.5 420 55.5
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 2.4e-130 470.3 417 56.1
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 4.0e-130 469.5 425 54.8
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 5.3e-130 469.2 419 55.6
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 6.9e-130 468.8 411 56.9
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.2e-129 468.0 412 57.0
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 1.2e-129 468.0 423 56.0
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.0e-129 467.2 419 54.7
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 2.6e-129 466.8 421 53.0
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 7.6e-129 465.3 416 55.5
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.3e-128 464.5 416 58.2
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 1.3e-128 464.5 416 57.9
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 2.2e-128 463.8 423 55.3
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 4.9e-128 462.6 421 54.9
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 8.4e-128 461.8 418 55.7
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.1e-127 461.5 416 57.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 1.1e-127 461.5 415 56.6
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 1.4e-127 461.1 416 57.5
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 1.9e-127 460.7 416 57.7
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 1.9e-127 460.7 419 54.4
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.9e-127 460.7 421 55.8
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.9e-127 460.7 412 56.1
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 5.4e-127 459.1 416 57.2
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 5.4e-127 459.1 421 58.9
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 5.4e-127 459.1 368 61.4
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 3.5e-126 456.4 416 57.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 4.6e-126 456.1 418 56.5
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 4.6e-126 456.1 415 54.9
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 7.9e-126 455.3 417 54.4
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 1.0e-125 454.9 416 56.5
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 3.0e-125 453.4 411 55.0
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.1e-124 451.4 430 55.6
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.1e-124 451.4 414 56.8
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.9e-124 450.7 445 52.6
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 2.5e-124 450.3 418 55.3
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 7.4e-124 448.7 415 54.9
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.3e-123 448.0 426 54.0
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 2.8e-123 446.8 416 56.0
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 3.7e-123 446.4 415 54.7
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 4.8e-123 446.0 490 49.2
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 2.4e-122 443.7 404 54.5
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 3.1e-122 443.4 413 55.0
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.0e-121 440.7 415 54.2
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.0e-120 438.3 428 50.0
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 6.4e-120 435.6 399 56.1
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 1.9e-119 434.1 392 55.9
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 7.9e-118 428.7 394 54.6
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 1.8e-117 427.6 415 50.1
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.9e-116 424.1 416 53.1
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 2.8e-115 420.2 393 56.2
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 4.0e-114 416.4 380 54.2
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.2e-113 414.8 394 52.8
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 5.5e-111 406.0 445 49.7
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 5.5e-111 406.0 368 55.7
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 3.5e-110 403.3 422 53.3
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 7.9e-110 402.1 425 48.7
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 1.8e-109 401.0 417 50.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 5.7e-108 396.0 451 48.1
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.6e-107 394.4 416 49.8
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 8.2e-107 392.1 378 53.4
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.4e-103 381.3 370 53.2
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.0e-101 373.6 421 49.6
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.5e-100 370.5 421 48.7
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 2.1e-94 350.9 339 54.6
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 6.3e-91 339.3 424 43.2
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 3.6e-86 323.6 422 42.7
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.7e-83 314.7 322 53.4
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 5.9e-81 306.2 418 39.2
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.7e-81 305.8 300 53.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 6.1e-78 296.2 359 46.8
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 8.8e-69 265.8 400 37.0
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 4.4e-68 263.5 226 57.1
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 2.7e-57 227.6 539 32.8
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 5.6e-55 219.9 251 48.6
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 7.5e-52 209.5 194 57.2
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 6.0e-49 199.9 443 32.3
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.5e-39 168.7 221 44.3
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 4.7e-38 163.7 449 29.2
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 5.4e-34 150.2 98 70.4
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.1e-31 142.5 103 64.1
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 3.6e-30 137.5 99 63.6
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 2.2e-27 128.3 95 62.1
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.2e-27 128.3 116 55.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 7.1e-26 123.2 408 26.7
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.0e-24 119.4 93 57.0
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 6.9e-21 106.7 78 64.1
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 1.7e-19 102.1 64 73.4
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 8.4e-19 99.8 95 49.5
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 5.3e-13 80.5 71 56.3
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 8.4e-11 73.2 49 79.6
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 9.3e-10 69.7 48 62.5
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 1.6e-09 68.9 53 69.8


User provided reference genes

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