Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06970 Selenicereus undatus HOM05D004404 ORTHO05D005070 7.7e-72 273.9 153 100.0
EL10Ac4g09141 Beta vulgaris HOM05D004404 ORTHO05D005070 2.4e-41 172.6 155 70.3
Hund22096 Selenicereus undatus HOM05D004404 ORTHO05D005070 3.8e-39 165.2 146 66.4
Ah.04g162340 Amaranthus hybridus HOM05D004404 ORTHO05D005070 2.5e-38 162.5 152 65.1
Sed0025331 Sechium edule HOM05D004404 ORTHO05D005070 5.0e-31 138.3 146 57.5
AUR62001008 Chenopodium quinoa HOM05D004404 ORTHO05D005070 8.6e-31 137.5 153 59.5
CsaV3_1G039570 Cucumis sativus L. HOM05D004404 ORTHO05D005070 1.2e-29 133.7 154 53.2
CiPaw.08G123500 Carya illinoinensis HOM05D004404 ORTHO05D005070 1.4e-28 130.2 146 56.8
MELO3C015378.2 Cucumis melo HOM05D004404 ORTHO05D005070 1.8e-28 129.8 154 51.3
Sed0027735 Sechium edule HOM05D004404 ORTHO05D005070 1.8e-28 129.8 148 55.4
Cpa.g.sc117.91 Carica papaya HOM05D004404 ORTHO05D005070 9.8e-27 124.0 152 53.3
Sc09g0003920 Simmondsia chinensis HOM05D004404 ORTHO05D005070 1.3e-26 123.6 148 59.5
Hma1.2p1_0817F.1_g223110 Hydrangea macrophylla HOM05D004404 ORTHO05D005070 1.7e-26 123.2 160 53.8
PGR004G0701 Punica granatum HOM05D004404 ORTHO05D005070 2.9e-26 122.5 165 57.0
FvH4_6g02920 Fragaria vesca HOM05D004404 ORTHO05D005070 6.4e-26 121.3 154 51.9
FAN05G1086 Fragaria x ananassa HOM05D004404 ORTHO05D005070 6.4e-26 121.3 154 51.9
FAN09G2523 Fragaria x ananassa HOM05D004404 ORTHO05D005070 6.4e-26 121.3 154 51.9
FAN14G0219 Fragaria x ananassa HOM05D004404 ORTHO05D005070 6.4e-26 121.3 154 51.9
TWI56G0209 Tripterygium wilfordii HOM05D004404 ORTHO05D005070 6.4e-26 121.3 143 55.9
FAN02G1710 Fragaria x ananassa HOM05D004404 ORTHO05D005070 8.3e-26 120.9 152 51.3
DCAR_009267 Daucus carota HOM05D004404 ORTHO05D005070 1.9e-25 119.8 148 56.8
TWI12G0609 Tripterygium wilfordii HOM05D004404 ORTHO05D005070 2.4e-25 119.4 154 54.5
Sopen01g040980 Solanum pennellii HOM05D004404 ORTHO05D005070 3.2e-25 119.0 155 53.5
Gohir.D13G175500 Gossypium hirsutum HOM05D004404 ORTHO05D005070 4.1e-25 118.6 160 49.4
DCAR_006653 Daucus carota HOM05D004404 ORTHO05D005070 5.4e-25 118.2 155 52.9
Potri.005G053400 Populus trichocarpa HOM05D004404 ORTHO05D005070 7.0e-25 117.9 155 53.5
Gorai.013G200900 Gossypium raimondii HOM05D004404 ORTHO05D005070 9.2e-25 117.5 160 49.4
Peaxi162Scf00071g00832 Petunia axillaris HOM05D004404 ORTHO05D005070 1.2e-24 117.1 152 50.0
TPR.G6977 Trifolium pratense HOM05D004404 ORTHO05D005070 1.2e-24 117.1 91 72.5
Ca_10045_v3 Cicer arietinum L. HOM05D004404 ORTHO05D005070 2.0e-24 116.3 122 59.0
Ciclev10002770m.g Citrus clementina HOM05D004404 ORTHO05D005070 2.0e-24 116.3 148 51.4
Medtr7g115180 Medicago truncatula HOM05D004404 ORTHO05D005070 2.0e-24 116.3 140 55.0
Thecc.05G283400 Theobroma cacao HOM05D004404 ORTHO05D005070 2.0e-24 116.3 129 60.5
Duzib177G0223 Durio zibethinus HOM05D004404 ORTHO05D005070 2.7e-24 115.9 151 51.0
Migut.N01913 Erythranthe guttata HOM05D004404 ORTHO05D005070 2.7e-24 115.9 153 52.9
Migut.O00778 Erythranthe guttata HOM05D004404 ORTHO05D005070 2.7e-24 115.9 151 53.6
RcHm_v2.0_Chr3g0451121 Rosa chinensis HOM05D004404 ORTHO05D005070 2.7e-24 115.9 157 49.7
THA.LOC104821674 Tarenaya hassleriana HOM05D004404 ORTHO05D005070 2.7e-24 115.9 133 55.6
Nitab4.5_0003279g0050 Nicotiana tabacum HOM05D004404 ORTHO05D005070 3.5e-24 115.5 162 51.2
Peaxi162Scf00282g00419 Petunia axillaris HOM05D004404 ORTHO05D005070 4.6e-24 115.2 153 53.6
Sed0023665 Sechium edule HOM05D004404 ORTHO05D005070 4.6e-24 115.2 144 51.4
Nitab4.5_0008996g0030 Nicotiana tabacum HOM05D004404 ORTHO05D005070 6.0e-24 114.8 156 53.2
Psat3g007120 Pisum sativum HOM05D004404 ORTHO05D005070 7.8e-24 114.4 117 59.8
Atru.chr2.818 Acer truncatum HOM05D004404 ORTHO05D005070 1.0e-23 114.0 153 54.2
Dinv10012 Davidia involucrata HOM05D004404 ORTHO05D005070 1.3e-23 113.6 145 53.8
AT5G28750 Arabidopsis thaliana HOM05D004404 ORTHO05D005070 1.7e-23 113.2 144 52.8
BcaB04g19631 Brassica carinata HOM05D004404 ORTHO05D005070 1.7e-23 113.2 126 60.3
VMungo0540G1464 Vigna mungo HOM05D004404 ORTHO05D005070 1.7e-23 113.2 150 52.0
HanXRQChr05g0158351 Helianthus annuus HOM05D004404 ORTHO05D005070 2.3e-23 112.8 150 51.3
Phvul.006G101800 Phaseolus vulgaris HOM05D004404 ORTHO05D005070 2.3e-23 112.8 150 51.3
Psat6g144600 Pisum sativum HOM05D004404 ORTHO05D005070 2.3e-23 112.8 143 53.8
Actinidia32805 Actinidia chinensis HOM05D004404 ORTHO05D005070 3.0e-23 112.5 110 65.5
arahy.Tifrunner.gnm1.ann1.E7WHUM Arachis hypogaea HOM05D004404 ORTHO05D005070 3.0e-23 112.5 146 53.4
Manes.09G153100 Manihot esculenta HOM05D004404 ORTHO05D005070 3.0e-23 112.5 158 49.4
Nitab4.5_0001592g0040 Nicotiana tabacum HOM05D004404 ORTHO05D005070 3.0e-23 112.5 159 50.3
CAN.G134.95 Capsicum annuum HOM05D004404 ORTHO05D005070 3.9e-23 112.1 154 53.9
Ca_09422_v3 Cicer arietinum L. HOM05D001346 ORTHO05D001205 3.9e-23 112.1 119 59.7
Haze_04360 Corylus avellana HOM05D004404 ORTHO05D005070 3.9e-23 112.1 181 46.4
MBI11_g15915_MAGBIO Magnolia biondii HOM05D004404 ORTHO05D005070 3.9e-23 112.1 152 52.0
vmacro13827 Vaccinium macrocarpon HOM05D004404 ORTHO05D005070 3.9e-23 112.1 150 55.3
AL6G40780 Arabidopsis lyrata HOM05D004404 ORTHO05D005070 5.0e-23 111.7 142 55.6
Lsat_1_v5_gn_8_115981 Lactuca sativa HOM05D004404 ORTHO05D005070 5.0e-23 111.7 151 51.0
Oeu038443.2 Olea europaea HOM05D004404 ORTHO05D005070 5.0e-23 111.7 101 63.4
Glyma.03G247200 Glycine max HOM05D004404 ORTHO05D005070 6.6e-23 111.3 150 52.0
PSO210G4542 Papaver somniferum HOM05D004404 ORTHO05D005070 6.6e-23 111.3 151 48.3
Glyma.19G244900 Glycine max HOM05D004404 ORTHO05D005070 8.6e-23 110.9 142 52.1
arahy.Tifrunner.gnm1.ann1.Z087RK Arachis hypogaea HOM05D004404 ORTHO05D005070 1.1e-22 110.5 136 55.9
BcaNung02110 Brassica carinata HOM05D004404 ORTHO05D005070 1.5e-22 110.2 132 55.3
C07p40140 Brassica napus HOM05D004404 ORTHO05D005070 1.5e-22 110.2 132 55.3
Sed0015873 Sechium edule HOM05D004404 ORTHO05D005070 1.5e-22 110.2 111 58.6
THA.LOC104805820 Tarenaya hassleriana HOM05D004404 ORTHO05D005070 1.5e-22 110.2 157 51.0
PSO461G0019 Papaver somniferum HOM05D004404 ORTHO05D005070 1.9e-22 109.8 151 48.3
BcaC04g23722 Brassica carinata HOM05D004404 ORTHO05D005070 2.5e-22 109.4 130 57.7
BcaC06g30686 Brassica carinata HOM05D004404 ORTHO05D005070 2.5e-22 109.4 133 54.9
C09p05370 Brassica napus HOM05D004404 ORTHO05D005070 2.5e-22 109.4 130 57.7
BolC9t53465H Brassica oleracea HOM05D004404 ORTHO05D005070 2.5e-22 109.4 130 57.7
TAR633G0732 Trochodendron aralioides HOM05D004404 ORTHO05D005070 2.5e-22 109.4 148 50.7
GSVIVG01021788001 Vitis vinifera HOM05D004404 ORTHO05D005070 2.5e-22 109.4 143 52.4
A06p38070 Brassica napus HOM05D004404 ORTHO05D005070 3.3e-22 109.0 132 56.1
BraA06t26722Z Brassica rapa HOM05D004404 ORTHO05D005070 3.3e-22 109.0 132 56.1
Duzib106G1455 Durio zibethinus HOM05D004404 ORTHO05D005070 3.3e-22 109.0 156 48.7
Hma1.2p1_0083F.1_g042910 Hydrangea macrophylla HOM05D004404 ORTHO05D005070 3.3e-22 109.0 91 68.1
TAR365G1136 Trochodendron aralioides HOM05D004404 ORTHO05D005070 3.3e-22 109.0 142 47.9
A09p04970 Brassica napus HOM05D004404 ORTHO05D005070 4.3e-22 108.6 130 57.7
Thhalv10005085m.g Eutrema salsugineum HOM05D004404 ORTHO05D005070 4.3e-22 108.6 132 53.8
Solyc01g097310.3 Solanum lycopersicum HOM05D004404 ORTHO05D005070 4.3e-22 108.6 155 49.7
TAR362G1272 Trochodendron aralioides HOM05D004404 ORTHO05D005070 4.3e-22 108.6 147 51.7
Aa31LG11G8580 Aethionema arabicum HOM05D004404 ORTHO05D005070 5.6e-22 108.2 162 50.6
Carub.0006s2600 Capsella rubella HOM05D004404 ORTHO05D005070 5.6e-22 108.2 133 55.6
MD04G1224600 Malus domestica HOM05D004404 ORTHO05D005070 5.6e-22 108.2 155 51.6
Medtr1g080910 Medicago truncatula HOM05D004404 ORTHO05D005070 5.6e-22 108.2 90 68.9
TPR.G12949 Trifolium pratense HOM05D001346 ORTHO05D001205 5.6e-22 108.2 148 52.7
BolC7t44551H Brassica oleracea HOM05D004404 ORTHO05D005070 7.3e-22 107.8 132 55.3
Lsat_1_v5_gn_5_40280 Lactuca sativa HOM05D004404 ORTHO05D005070 7.3e-22 107.8 161 49.1
Lj1g0028137 Lotus japonicus HOM05D004404 ORTHO05D005070 9.5e-22 107.5 136 53.7
Migut.B01092 Erythranthe guttata HOM05D004404 ORTHO05D005070 1.2e-21 107.1 143 53.8
Sp2g20060 Schrenkiella parvula HOM05D004404 ORTHO05D005070 1.6e-21 106.7 130 56.2
Cc02_g30710 Coffea canephora HOM05D004404 ORTHO05D005070 2.1e-21 106.3 109 62.4
ECA246G2005 Erigeron canadensis HOM05D004404 ORTHO05D005070 2.1e-21 106.3 91 68.1
SGA_v2.0_scaffold80G25905 Striga asiatica HOM05D004404 ORTHO05D005070 2.8e-21 105.9 141 50.4
ECA240G2961 Erigeron canadensis HOM05D004404 ORTHO05D005070 3.6e-21 105.5 94 68.1
Rhsim07G0075300 Rhododendron simsii HOM05D004404 ORTHO05D005070 4.7e-21 105.1 108 62.0
HPP92_017518 Vanilla planifolia HOM05D004404 ORTHO05D005070 4.7e-21 105.1 150 50.7
MSTRG.28017 Avicennia marina HOM05D004404 ORTHO05D005070 6.2e-21 104.8 153 45.8
Nn1g02537 Nelumbo nucifera HOM05D004404 ORTHO05D005070 8.1e-21 104.4 148 50.7
Manes.08G134600 Manihot esculenta HOM05D004404 ORTHO05D005070 1.1e-20 104.0 152 52.0
CARHR185320 Cardamine hirsuta HOM05D004404 ORTHO05D005070 1.4e-20 103.6 135 52.6
MBI04_g08412_MAGBIO Magnolia biondii HOM05D004404 ORTHO05D005070 1.4e-20 103.6 136 49.3
Aqoxy5G00363 Aquilegia oxysepala HOM05D004404 ORTHO05D005070 1.8e-20 103.2 129 53.5
ATR0665G151 Amborella trichopoda HOM05D004404 ORTHO05D005070 4.0e-20 102.1 141 50.4
C02p57620 Brassica napus HOM05D004404 ORTHO05D005070 4.0e-20 102.1 131 54.2
Lalb_Chr02g0148831 Lupinus albus HOM05D004404 ORTHO05D005070 5.2e-20 101.7 154 44.8
BolC2t11835H Brassica oleracea HOM05D004404 ORTHO05D005070 6.8e-20 101.3 96 61.5
Lj5g0014543 Lotus japonicus HOM05D004404 ORTHO05D005070 6.8e-20 101.3 108 56.5
COL.COLO4_15349 Corchorus olitorius HOM05D004404 ORTHO05D005070 8.9e-20 100.9 177 43.5
Sabra13G0037800 Salix brachista HOM05D004404 ORTHO05D005070 1.2e-19 100.5 123 52.8
CDE07G0487 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 1.5e-19 100.1 151 48.3
MD12G1241300 Malus domestica HOM05D004404 ORTHO05D005070 2.0e-19 99.8 166 47.6
CDE04G3433 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 2.6e-19 99.4 152 49.3
Gohir.A13G170100 Gossypium hirsutum HOM05D004404 ORTHO05D005070 2.6e-19 99.4 118 54.2
Aqoxy2G03510 Aquilegia oxysepala HOM05D004404 ORTHO05D005070 3.4e-19 99.0 88 59.1
Lalb_Chr21g0310981 Lupinus albus HOM05D004404 ORTHO05D005070 3.4e-19 99.0 113 49.6
Oeu016441.1 Olea europaea HOM05D004404 ORTHO05D005070 3.4e-19 99.0 108 57.4
QL03p025881 Quercus lobata HOM05D004404 ORTHO05D005070 4.4e-19 98.6 119 56.3
Glyma.10G162200 Glycine max HOM05D004404 ORTHO05D005070 5.8e-19 98.2 139 48.2
Zm00001eb218840 Zea mays HOM05D004404 ORTHO05D005070 7.5e-19 97.8 160 46.9
CDE07G0557 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 1.3e-18 97.1 154 44.8
Mapoly0001s0151 Marchantia polymorpha HOM05D004404 ORTHO05D005070 2.2e-18 96.3 160 45.6
QL03p026586 Quercus lobata HOM05D004404 ORTHO05D005070 2.9e-18 95.9 115 56.5
A02p38290 Brassica napus HOM05D004404 ORTHO05D005070 3.7e-18 95.5 59 78.0
Os03g0634000 Oryza sativa ssp. japonica HOM05D004404 ORTHO05D005070 3.7e-18 95.5 91 61.5
MSTRG.20447 Avicennia marina HOM05D004404 ORTHO05D005070 1.4e-17 93.6 84 60.7
Dinv04734 Davidia involucrata HOM05D004404 ORTHO05D005070 1.9e-17 93.2 114 51.8
ClCG03G016400 Citrullus lanatus HOM05D004404 ORTHO05D005070 3.2e-17 92.4 199 39.7
COL.COLO4_00126 Corchorus olitorius HOM05D004404 ORTHO05D005070 5.4e-17 91.7 106 53.8
PSO832G3549 Papaver somniferum HOM05D004404 ORTHO05D005070 7.1e-17 91.3 112 51.8
SGA_v2.0_scaffold81G26090 Striga asiatica HOM05D004404 ORTHO05D005070 9.2e-17 90.9 105 53.3
PSO210G4640 Papaver somniferum HOM05D004404 ORTHO05D005070 1.6e-16 90.1 112 50.9
SEGI_08397 Sequoiadendron giganteum HOM05D004404 ORTHO05D005070 1.6e-16 90.1 103 52.4
PGSC0003DMG400019456 Solanum tuberosum HOM05D004404 ORTHO05D005070 1.6e-16 90.1 204 40.2
HanXRQChr09g0258871 Helianthus annuus HOM05D004404 ORTHO05D005070 2.1e-16 89.7 148 45.9
SalBow8G4983 Salvia bowleyana HOM05D004404 ORTHO05D005070 2.1e-16 89.7 106 53.8
unitig_899.g14740 Utricularia gibba HOM05D000778 ORTHO05D005070 2.1e-16 89.7 139 49.6
Cfa006425 Carpinus fangiana HOM05D004404 ORTHO05D005070 4.6e-16 88.6 155 42.6
Pp3c15_9990 Physcomitrium patens HOM05D004404 ORTHO05D005070 7.8e-16 87.8 124 51.6
SMO174G0006 Selaginella moellendorffii HOM05D004404 ORTHO05D005070 1.0e-15 87.4 148 44.6
Oeu027474.1 Olea europaea HOM05D004404 ORTHO05D005070 2.3e-15 86.3 79 59.5
AagrBONN_evm.TU.Sc2ySwM_117.2792 Anthoceros agrestis HOM05D004404 ORTHO05D005070 3.0e-15 85.9 47 89.4
BcaC03g17750 Brassica carinata HOM05D004404 ORTHO05D005070 3.0e-15 85.9 131 47.3
CBR_g20020 Chara braunii HOM05D004404 ORTHO05D005070 3.0e-15 85.9 105 49.5
Prupe.6G343300 Prunus persica HOM05D004404 ORTHO05D005070 3.9e-15 85.5 159 43.4
Pp3c8_14190 Physcomitrium patens HOM05D004404 ORTHO05D005070 5.1e-15 85.1 141 42.6
Cre10.g438550 Chlamydomonas reinhardtii HOM05D004404 ORTHO05D005070 3.3e-14 82.4 83 57.8
Zm00001eb051040 Zea mays HOM05D004404 ORTHO05D005070 4.3e-14 82.0 44 90.9
Glyma.20G224600 Glycine max HOM05D004404 ORTHO05D005070 6.2e-13 78.2 146 37.7
MD16G1158600 Malus domestica HOM05D004404 ORTHO05D005070 8.1e-13 77.8 61 63.9
MCO09G790 Micromonas commoda HOM05D004404 ORTHO05D005070 1.4e-12 77.0 116 44.0
Potri.013G040900 Populus trichocarpa HOM05D004404 ORTHO05D005070 2.3e-12 76.3 161 41.6
SGA_v2.0_scaffold55G19806 Striga asiatica HOM05D004404 ORTHO05D005070 1.1e-09 67.4 41 80.5
Nitab4.5_0013900g0010 Nicotiana tabacum HOM05D004404 ORTHO05D005070 4.6e-08 62.0 96 42.7
BraA02t08810Z Brassica rapa HOM05D004404 ORTHO05D005070 1.0e-07 60.8 82 57.3
A03p15670 Brassica napus HOM05D005376 ORTHO05D006481 5.1e-07 58.5 121 34.7
AT5G52440 Arabidopsis thaliana HOM05D005376 ORTHO05D006481 6.6e-07 58.2 122 34.4
AL8G26870 Arabidopsis lyrata HOM05D005376 ORTHO05D006481 1.5e-06 57.0 122 34.4
Carub.0008s1254 Capsella rubella HOM05D005376 ORTHO05D006481 1.5e-06 57.0 127 34.6
BraA03t10859Z Brassica rapa HOM05D005376 ORTHO05D006481 1.9e-06 56.6 124 34.7
CDE09G0642 Ceratophyllum demersum HOM05D005376 ORTHO05D006481 1.9e-06 56.6 59 49.2
Thhalv10014513m.g Eutrema salsugineum HOM05D005376 ORTHO05D006481 1.9e-06 56.6 123 33.3
BcaC03g14530 Brassica carinata HOM05D005376 ORTHO05D006481 3.3e-06 55.8 120 34.2
HPP92_014785 Vanilla planifolia HOM05D005376 ORTHO05D006481 4.3e-06 55.5 56 48.2
CARHR265430 Cardamine hirsuta HOM05D005376 ORTHO05D006481 5.6e-06 55.1 123 33.3
QL09p013410 Quercus lobata HOM05D005376 ORTHO05D006481 5.6e-06 55.1 127 35.4
THA.LOC104825106 Tarenaya hassleriana HOM05D005376 ORTHO05D006481 5.6e-06 55.1 110 34.5
C02p19650 Brassica napus HOM05D005376 ORTHO05D006481 7.3e-06 54.7 120 33.3
BolC2t08101H Brassica oleracea HOM05D005376 ORTHO05D006481 7.3e-06 54.7 120 33.3
BraA02t06246Z Brassica rapa HOM05D005376 ORTHO05D006481 7.3e-06 54.7 122 33.6
Migut.F01097 Erythranthe guttata HOM05D005376 ORTHO05D006481 7.3e-06 54.7 74 37.8
SMO223G0008 Selaginella moellendorffii HOM05D005376 ORTHO05D006481 7.3e-06 54.7 66 45.5
A02p11810 Brassica napus HOM05D005376 ORTHO05D006481 9.6e-06 54.3 120 33.3
Glyma.10G232400 Glycine max HOM05D005376 ORTHO05D006481 9.6e-06 54.3 48 52.1
Potri.015G147100 Populus trichocarpa HOM05D005376 ORTHO05D006481 9.6e-06 54.3 48 52.1
Zm00001eb085050 Zea mays HOM05D005376 ORTHO05D006481 9.6e-06 54.3 78 39.7
Zm00001eb421330 Zea mays HOM05D005376 ORTHO05D006481 9.6e-06 54.3 78 39.7


User provided reference genes

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