Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 2.9e-216 755.0 386 100.0
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 3.2e-114 416.0 398 58.0
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 3.0e-112 409.5 384 59.9
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 3.0e-104 382.9 378 55.6
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 1.2e-100 370.9 399 52.6
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 9.2e-98 361.3 396 52.0
AUR62041544 Chenopodium quinoa HOM05D005759 ORTHO05D007172 7.8e-97 358.2 319 61.8
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 8.1e-94 348.2 395 51.9
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 1.4e-93 347.4 409 50.4
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 1.2e-92 344.4 403 51.6
PGR142G1839 Punica granatum HOM05D005759 ORTHO05D007172 1.3e-91 340.9 391 52.2
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 2.9e-91 339.7 409 49.9
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 2.9e-91 339.7 410 49.0
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 1.9e-90 337.0 402 49.8
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 7.1e-90 335.1 392 49.7
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 9.2e-90 334.7 402 48.0
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 1.6e-89 334.0 392 49.5
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 3.5e-89 332.8 414 49.0
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 1.0e-88 331.3 393 49.1
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 1.3e-88 330.9 413 47.9
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 8.7e-88 328.2 398 50.3
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 8.7e-88 328.2 394 50.5
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 5.6e-87 325.5 397 49.6
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 9.6e-87 324.7 388 48.5
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 1.2e-86 324.3 388 49.5
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 3.6e-86 322.8 392 49.5
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 2.4e-85 320.1 411 47.0
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 3.1e-85 319.7 395 49.4
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 6.9e-85 318.5 359 51.8
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 9.0e-85 318.2 357 52.1
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 1.5e-84 317.4 402 48.3
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 5.8e-84 315.5 389 48.6
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 7.6e-84 315.1 397 48.9
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 4.9e-83 312.4 401 46.4
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.9e-82 310.5 369 50.1
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 2.7e-81 306.6 411 45.0
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 4.6e-81 305.8 358 49.2
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 1.0e-80 304.7 379 47.0
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 6.6e-80 302.0 394 47.2
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 8.7e-80 301.6 378 46.3
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.9e-79 300.4 348 51.4
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 7.3e-79 298.5 402 46.3
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 9.6e-79 298.1 354 49.4
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 1.6e-78 297.4 393 46.1
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 6.2e-78 295.4 370 48.1
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 8.1e-78 295.0 379 47.2
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 8.1e-78 295.0 430 44.0
Lsat_1_v5_gn_2_102781 Lactuca sativa HOM05D005759 ORTHO05D007172 5.3e-77 292.4 364 48.4
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 9.0e-77 291.6 386 47.2
Atru.chr12.959 Acer truncatum HOM05D005759 ORTHO05D007172 2.6e-76 290.0 324 52.2
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 2.6e-76 290.0 368 49.7
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 1.3e-75 287.7 386 46.1
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 8.4e-75 285.0 386 44.6
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 1.9e-74 283.9 378 45.0
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 3.2e-74 283.1 378 44.7
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 7.1e-74 282.0 386 44.0
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 9.3e-74 281.6 395 44.6
CAN.G135.64 Capsicum annuum HOM05D005759 ORTHO05D007172 9.3e-74 281.6 378 45.2
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 9.3e-74 281.6 396 43.4
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 1.2e-73 281.2 362 47.8
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 2.1e-73 280.4 383 46.2
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 4.6e-73 279.3 384 42.7
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 6.0e-73 278.9 400 42.5
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 7.9e-73 278.5 368 46.5
Peaxi162Scf00244g00007 Petunia axillaris HOM05D005759 ORTHO05D007172 1.0e-72 278.1 320 50.3
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 1.8e-72 277.3 383 44.4
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 2.3e-72 276.9 401 41.9
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 3.9e-72 276.2 378 44.2
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 1.1e-71 274.6 388 44.1
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 1.1e-71 274.6 388 44.1
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 1.5e-71 274.2 384 43.5
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 1.9e-71 273.9 341 47.5
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 7.4e-71 271.9 393 43.5
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 4.8e-70 269.2 344 48.0
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 1.4e-69 267.7 395 42.0
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 5.3e-69 265.8 399 42.1
HanXRQChr16g0513241 Helianthus annuus HOM05D005759 ORTHO05D007172 1.2e-68 264.6 323 49.2
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 4.5e-68 262.7 391 42.2
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 3.8e-67 259.6 357 44.8
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 4.9e-67 259.2 400 40.0
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 1.4e-66 257.7 384 41.4
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 1.4e-66 257.7 399 41.4
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 5.5e-66 255.8 348 45.7
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 9.3e-66 255.0 344 42.7
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 2.1e-65 253.8 396 40.9
unitig_736.g22320 Utricularia gibba HOM05D005759 ORTHO05D007172 4.6e-65 252.7 398 42.5
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 7.9e-65 251.9 383 40.5
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 1.3e-64 251.1 392 40.3
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 2.3e-64 250.4 386 42.0
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 3.9e-64 249.6 387 42.1
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 2.5e-63 246.9 367 42.0
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 5.6e-63 245.7 391 41.2
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 3.7e-62 243.0 391 41.7
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 6.9e-61 238.8 357 42.0
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 1.4e-58 231.1 325 44.3
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 5.5e-58 229.2 390 39.5
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 2.3e-56 223.8 389 39.6
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 3.0e-56 223.4 358 42.2
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 5.1e-56 222.6 387 37.2
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 4.3e-55 219.5 388 38.4
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 2.4e-53 213.8 385 40.8
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 2.0e-52 210.7 218 49.1
Duzib128G1757 Durio zibethinus HOM05D005759 ORTHO05D007172 4.5e-52 209.5 167 59.3
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 1.2e-49 201.4 214 47.2
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 3.0e-48 196.8 205 49.8
Ca_06884_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 6.9e-45 185.7 291 41.6
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 8.5e-43 178.7 196 49.0
CSS0000330 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 1.8e-37 161.0 222 43.2
Zm00001eb086490 Zea mays HOM05D005759 ORTHO05D007172 1.4e-32 144.8 152 49.3
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 2.0e-31 141.0 433 29.3
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis HOM05D005759 ORTHO05D007172 5.5e-26 122.9 362 29.3
Pp3c1_25970 Physcomitrium patens HOM05D005759 ORTHO05D007172 7.2e-26 122.5 344 30.8
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 1.6e-20 104.8 183 39.9
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 3.5e-20 103.6 171 37.4
Zm00001eb201540 Zea mays HOM05D005759 ORTHO05D007172 3.0e-16 90.5 79 53.2
SEGI_00328 Sequoiadendron giganteum HOM05D005759 ORTHO05D000001 2.6e-15 87.4 276 30.8
Peaxi162Scf00244g00111 Petunia axillaris HOM05D005759 ORTHO05D007172 4.8e-14 83.2 79 54.4
GSVIVG01034723001 Vitis vinifera HOM05D005759 ORTHO05D007172 4.5e-12 76.6 98 49.0
PSO339G2548 Papaver somniferum HOM05D005759 ORTHO05D007172 1.5e-10 71.6 82 46.3
CBR_g23342 Chara braunii HOM05D005759 ORTHO05D002561 2.3e-08 64.3 426 24.4
Lsat_1_v5_gn_7_84341 Lactuca sativa HOM05D005759 ORTHO05D007172 6.8e-08 62.8 100 40.0
FAN01G1973 Fragaria x ananassa HOM05D005759 ORTHO05D007172 8.9e-08 62.4 319 27.6
Ca_11766_v3 Cicer arietinum L. HOM05D001348 ORTHO05D002788 9.8e-07 58.9 46 60.9
Peaxi162Scf00244g00112 Petunia axillaris HOM05D005759 ORTHO05D007172 8.3e-06 55.8 143 32.2


User provided reference genes

Program Settings