Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 3.5e-177 625.2 396 100.0
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 1.9e-138 496.5 403 79.2
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 2.5e-138 496.1 400 82.2
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 4.3e-135 485.3 407 78.1
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 6.7e-128 461.5 413 73.4
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.1e-127 460.7 324 77.5
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 3.1e-125 452.6 325 76.3
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 3.1e-125 452.6 325 76.9
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.2e-124 450.7 327 74.9
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 4.5e-124 448.7 327 74.3
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 4.5e-124 448.7 330 72.4
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 1.0e-123 447.6 332 75.0
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 1.3e-123 447.2 328 75.0
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 1.3e-123 447.2 266 86.5
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.7e-123 446.8 319 76.2
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 2.9e-123 446.0 267 86.1
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 3.8e-123 445.7 332 78.0
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 8.5e-123 444.5 331 75.2
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 8.5e-123 444.5 323 74.3
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 1.1e-122 444.1 329 79.0
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 2.5e-122 443.0 274 81.8
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 3.2e-122 442.6 332 74.4
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 7.2e-122 441.4 316 75.6
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 9.4e-122 441.0 271 86.0
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.2e-121 440.7 388 68.3
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 1.2e-121 440.7 388 68.6
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 1.2e-121 440.7 268 84.3
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 1.6e-121 440.3 320 75.9
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 1.6e-121 440.3 329 73.9
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 1.6e-121 440.3 335 72.2
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.7e-121 439.5 319 73.7
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 4.7e-121 438.7 398 71.6
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 1.0e-120 437.6 327 76.1
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 1.0e-120 437.6 327 75.2
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 1.0e-120 437.6 327 75.2
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 1.4e-120 437.2 327 73.1
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 1.8e-120 436.8 317 74.1
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 3.0e-120 436.0 266 85.0
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 3.9e-120 435.6 329 72.3
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 3.9e-120 435.6 346 70.2
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 5.2e-120 435.3 323 79.3
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 6.7e-120 434.9 361 69.0
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 2.0e-119 433.3 291 78.4
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 3.3e-119 432.6 330 74.2
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 4.4e-119 432.2 269 82.2
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 4.4e-119 432.2 271 83.0
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 5.7e-119 431.8 327 72.2
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.3e-118 430.6 329 72.0
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-118 430.6 320 73.1
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-118 430.6 320 73.1
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 1.7e-118 430.3 337 73.3
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 3.7e-118 429.1 329 71.7
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 3.7e-118 429.1 397 67.5
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 8.2e-118 427.9 270 81.5
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 7.0e-117 424.9 324 71.3
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 7.0e-117 424.9 374 75.4
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 7.0e-117 424.9 329 71.4
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 7.0e-117 424.9 393 65.6
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 9.1e-117 424.5 336 70.5
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 2.0e-116 423.3 405 64.2
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 2.6e-116 422.9 267 82.0
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 2.6e-116 422.9 325 73.2
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 5.9e-116 421.8 396 68.9
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.0e-115 421.0 268 80.6
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 1.3e-115 420.6 319 74.6
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 6.5e-115 418.3 398 67.6
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.1e-114 417.5 338 72.5
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 1.9e-114 416.8 327 69.7
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.9e-114 416.8 327 69.7
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 3.2e-114 416.0 326 68.7
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 3.2e-114 416.0 330 69.1
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 4.2e-114 415.6 331 68.9
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 4.2e-114 415.6 329 70.2
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 4.2e-114 415.6 264 80.7
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 7.2e-114 414.8 397 65.2
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 7.2e-114 414.8 314 71.0
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 3.6e-113 412.5 268 78.7
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 8.0e-113 411.4 356 66.0
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 6.7e-112 408.3 268 77.2
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.7e-112 408.3 330 69.7
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 8.8e-112 407.9 321 68.2
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 8.8e-112 407.9 329 67.8
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 1.2e-111 407.5 316 68.4
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 4.4e-111 405.6 406 68.0
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 5.7e-111 405.2 331 67.1
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 1.3e-110 404.1 268 76.1
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 1.8e-109 400.2 342 67.0
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 1.8e-109 400.2 348 65.8
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 3.1e-109 399.4 266 77.8
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 2.7e-108 396.4 332 65.7
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 8.5e-107 391.3 267 76.8
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 1.1e-106 391.0 267 76.4
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 8.0e-105 384.8 242 81.8
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 4.0e-104 382.5 248 78.2
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 8.8e-104 381.3 241 80.5
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 2.0e-103 380.2 399 59.1
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.3e-102 377.5 242 81.4
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 2.5e-98 363.2 399 64.2
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 7.2e-98 361.7 329 62.0
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 7.2e-98 361.7 271 67.2
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 1.2e-97 360.9 268 67.2
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.3e-90 335.9 224 79.5
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.8e-88 330.5 270 62.6
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 2.3e-88 330.1 269 62.8
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.4e-87 326.2 354 52.5
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 3.4e-87 326.2 354 52.5
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 2.2e-86 323.6 266 66.9
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.1e-85 321.2 328 57.9
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 4.6e-84 315.8 278 60.4
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 2.0e-79 300.4 264 58.0
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 2.4e-77 293.5 262 56.5
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 7.8e-76 288.5 183 78.7
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 1.5e-74 284.3 332 49.7
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 6.4e-70 268.9 171 84.8
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.1e-69 266.2 332 54.2
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-68 264.6 205 69.8
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 8.4e-62 241.9 348 51.4
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 7.1e-61 238.8 148 78.4
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.9e-54 216.9 224 53.1
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.0e-44 182.6 154 64.3
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 1.5e-42 177.9 98 84.7
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.9e-30 137.1 108 71.3
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 1.3e-27 128.3 93 68.8
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.2e-25 120.9 228 46.5
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 2.1e-20 104.4 255 31.8
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.3e-19 100.9 102 62.7
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.3e-17 95.1 119 45.4
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 2.4e-16 90.9 233 29.2
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 2.4e-16 90.9 62 66.1


User provided reference genes

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