Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 5.4e-110 401.0 197 100.0
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.1e-19 100.9 121 52.1
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 1.5e-19 100.5 121 48.8
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 2.6e-19 99.8 120 50.0
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 3.3e-19 99.4 96 58.3
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 7.4e-19 98.2 119 47.9
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 7.4e-19 98.2 96 57.3
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 1.3e-18 97.4 173 39.9
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 1.3e-18 97.4 121 47.9
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 1.3e-18 97.4 140 45.7
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.7e-18 97.1 120 48.3
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 4.8e-18 95.5 129 45.7
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 4.1e-17 92.4 135 42.2
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 7.0e-17 91.7 120 45.8
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 9.1e-17 91.3 122 47.5
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 2.0e-16 90.1 134 42.5
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 2.6e-16 89.7 118 49.2
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 1.0e-15 87.8 120 45.0
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 1.3e-15 87.4 120 45.8
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 2.9e-15 86.3 123 42.3
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 2.9e-15 86.3 131 43.5
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 2.9e-15 86.3 130 44.6
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 3.8e-15 85.9 118 45.8
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 6.5e-15 85.1 120 45.0
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 6.5e-15 85.1 125 41.6
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.5e-14 84.0 139 41.0
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 1.9e-14 83.6 123 41.5
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 2.5e-14 83.2 120 44.2
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 2.5e-14 83.2 120 45.8
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 5.5e-14 82.0 135 40.7
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 9.4e-14 81.3 125 40.8
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 9.4e-14 81.3 109 46.8
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 1.2e-13 80.9 105 46.7
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 2.1e-13 80.1 120 46.7
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 2.1e-13 80.1 131 39.7
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 2.7e-13 79.7 123 43.9
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 4.7e-13 79.0 91 51.6
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 4.7e-13 79.0 124 42.7
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 6.1e-13 78.6 127 40.2
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 6.1e-13 78.6 127 40.2
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 8.0e-13 78.2 121 44.6
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 1.0e-12 77.8 89 49.4
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 1.0e-12 77.8 132 38.6
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 1.4e-12 77.4 123 40.7
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 1.4e-12 77.4 94 46.8
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 1.8e-12 77.0 119 42.0
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 2.3e-12 76.6 106 44.3
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 2.3e-12 76.6 120 40.8
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 3.9e-12 75.9 119 40.3
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 3.9e-12 75.9 121 40.5
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 5.2e-12 75.5 122 41.8
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 6.7e-12 75.1 127 41.7
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 1.1e-11 74.3 93 45.2
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 1.5e-11 73.9 125 39.2
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.5e-11 73.9 117 41.9
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 1.5e-11 73.9 123 40.7
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 2.0e-11 73.6 109 42.2
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 4.4e-11 72.4 124 39.5
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 5.7e-11 72.0 95 44.2
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 7.4e-11 71.6 133 36.8
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 1.7e-10 70.5 95 43.2
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 2.2e-10 70.1 140 35.7
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 2.2e-10 70.1 140 35.7
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 2.2e-10 70.1 146 33.6
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 2.2e-10 70.1 119 38.7
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 2.8e-10 69.7 95 43.2
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 2.8e-10 69.7 92 45.7
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.7e-10 69.3 100 42.0
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 4.8e-10 68.9 124 39.5
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 6.3e-10 68.6 105 43.8
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 6.3e-10 68.6 122 39.3
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 1.1e-09 67.8 126 36.5
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 1.1e-09 67.8 44 75.0
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 1.4e-09 67.4 89 46.1
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 3.1e-09 66.2 89 47.2
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 3.1e-09 66.2 141 37.6
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 3.1e-09 66.2 135 37.0
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 4.1e-09 65.9 133 36.8
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 5.3e-09 65.5 105 40.0
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 7.0e-09 65.1 85 47.1
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 1.6e-08 63.9 141 35.5
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 3.5e-08 62.8 111 39.6
Gohir.A05G416601 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.5e-08 62.8 98 40.8
Gohir.A05G417001 Gossypium hirsutum HOM05D006778 ORTHO05D008341 3.5e-08 62.8 98 40.8
Gorai.012G000200 Gossypium raimondii HOM05D006778 ORTHO05D008341 3.5e-08 62.8 98 40.8
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 4.5e-08 62.4 134 35.1
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 4.5e-08 62.4 105 40.0
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 1.7e-07 60.5 126 35.7
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 2.2e-07 60.1 55 60.0
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 2.9e-07 59.7 109 40.4
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 5.0e-07 58.9 145 35.9
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 6.5e-07 58.5 45 66.7
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 8.5e-07 58.2 47 59.6
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 1.1e-06 57.8 105 37.1
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 1.5e-06 57.4 107 33.6
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 1.9e-06 57.0 105 36.2
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 1.9e-06 57.0 105 35.2
PSO017G3634 Papaver somniferum HOM05D006778 ORTHO05D008341 2.5e-06 56.6 96 39.6
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 2.5e-06 56.6 91 41.8
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 3.2e-06 56.2 105 36.2
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 9.4e-06 54.7 96 38.5


User provided reference genes

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