Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund05076 Selenicereus undatus HOM05D005056 ORTHO05D006487 5.0e-105 384.4 189 100.0
Hund19725 Selenicereus undatus HOM05D000823 ORTHO05D000088 1.6e-34 150.2 91 89.0
Hund06242 Selenicereus undatus HOM05D005056 ORTHO05D006487 3.4e-29 132.5 90 78.9
Ah.01g019270 Amaranthus hybridus HOM05D005056 ORTHO05D006487 6.9e-22 108.2 89 62.9
GSVIVG01038137001 Vitis vinifera HOM05D005056 ORTHO05D006487 3.9e-17 92.4 91 53.8
AUR62011304 Chenopodium quinoa HOM05D005056 ORTHO05D006487 5.1e-17 92.0 77 66.2
Dinv04468 Davidia involucrata HOM05D005056 ORTHO05D006487 3.3e-16 89.4 91 53.8
Hma1.2p1_0126F.1_g059250 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 3.3e-16 89.4 92 53.3
AUR62016753 Chenopodium quinoa HOM05D005056 ORTHO05D006487 1.3e-15 87.4 77 63.6
Hma1.2p1_0150F.1_g066780 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 1.3e-15 87.4 91 53.8
TAR636G2681 Trochodendron aralioides HOM05D005056 ORTHO05D006487 2.8e-15 86.3 85 54.1
vmacro03868 Vaccinium macrocarpon HOM05D005056 ORTHO05D006487 2.4e-14 83.2 91 49.5
Cc03_g13950 Coffea canephora HOM05D005056 ORTHO05D006487 3.1e-14 82.8 146 33.6
Hma1.2p1_1145F.1_g261360 Hydrangea macrophylla HOM05D005056 ORTHO05D006487 3.1e-14 82.8 92 50.0
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 3.4e-13 79.3 91 49.5
Rhsim13G0194600 Rhododendron simsii HOM05D005056 ORTHO05D006656 5.8e-13 78.6 91 48.4
Atru.chr3.3232 Acer truncatum HOM05D005056 ORTHO05D006487 1.1e-11 74.3 90 47.8
CSS0024905 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 1.4e-11 73.9 85 48.2
Eucgr.H00313 Eucalyptus grandis HOM05D005056 ORTHO05D006487 1.4e-11 73.9 92 47.8
MBI18_g06087_MAGBIO Magnolia biondii HOM05D005056 ORTHO05D006487 1.9e-11 73.6 92 42.4
CSS0004898 Camellia sinensis var. sinensis HOM05D005056 ORTHO05D006487 5.5e-11 72.0 85 47.1
Eucgr.H00317 Eucalyptus grandis HOM05D005056 ORTHO05D006487 5.5e-11 72.0 91 47.3
DCAR_019081 Daucus carota HOM05D005056 ORTHO05D006487 7.1e-11 71.6 92 46.7
Gohir.A04G120600 Gossypium hirsutum HOM05D005056 ORTHO05D006487 2.1e-10 70.1 91 50.5
AUR62016951 Chenopodium quinoa HOM05D005056 ORTHO05D006487 2.7e-10 69.7 59 64.4
Thecc.05G215400 Theobroma cacao HOM05D005056 ORTHO05D006487 3.5e-10 69.3 91 49.5
PGR142G4138 Punica granatum HOM05D005056 ORTHO05D006487 7.9e-10 68.2 91 41.8
Gohir.D04G162100 Gossypium hirsutum HOM05D005056 ORTHO05D006487 1.0e-09 67.8 91 49.5
SGA_v2.0_scaffold289G47281 Striga asiatica HOM05D005056 ORTHO05D006487 1.0e-09 67.8 91 42.9
Cfa015266 Carpinus fangiana HOM05D005056 ORTHO05D006487 1.3e-09 67.4 94 42.6
MD17G1177700 Malus domestica HOM05D005056 ORTHO05D006487 1.8e-09 67.0 85 49.4
Prupe.1G206800 Prunus persica HOM05D005056 ORTHO05D006487 2.3e-09 66.6 89 44.9
Duzib128G0002 Durio zibethinus HOM05D005056 ORTHO05D006487 5.1e-09 65.5 91 46.2
Oeu018048.1 Olea europaea HOM05D005056 ORTHO05D006487 5.1e-09 65.5 93 43.0
CiPaw.02G100700 Carya illinoinensis HOM05D005056 ORTHO05D006487 8.7e-09 64.7 84 47.6
CsaV3_6G007040 Cucumis sativus L. HOM05D005056 ORTHO05D006487 8.7e-09 64.7 89 46.1
Gorai.012G150100 Gossypium raimondii HOM05D005056 ORTHO05D006487 8.7e-09 64.7 96 44.8
Nitab4.5_0002129g0080 Nicotiana tabacum HOM05D005056 ORTHO05D006487 1.1e-08 64.3 90 41.1
Sabra13G0105000 Salix brachista HOM05D005056 ORTHO05D006487 1.1e-08 64.3 83 47.0
Sabra13G0104700 Salix brachista HOM05D005056 ORTHO05D006487 1.9e-08 63.5 83 47.0
Ciclev10019145m.g Citrus clementina HOM05D005056 ORTHO05D006487 2.5e-08 63.2 96 42.7
Potri.013G125800 Populus trichocarpa HOM05D005056 ORTHO05D006487 2.5e-08 63.2 83 45.8
QL93p1902_0036 Quercus lobata HOM05D005056 ORTHO05D006487 4.3e-08 62.4 93 45.2
Sc08g0000580 Simmondsia chinensis HOM05D005056 ORTHO05D006487 4.3e-08 62.4 90 46.7
Sopen11g030040 Solanum pennellii HOM05D005056 ORTHO05D006487 4.3e-08 62.4 90 40.0
SEGI_41310 Sequoiadendron giganteum HOM05D005056 ORTHO05D006487 5.7e-08 62.0 106 37.7
Manes.16G069500 Manihot esculenta HOM05D005056 ORTHO05D006487 7.4e-08 61.6 80 43.8
TWI38G0332 Tripterygium wilfordii HOM05D005056 ORTHO05D006487 7.4e-08 61.6 91 44.0
Peaxi162Scf00568g00417 Petunia axillaris HOM05D005056 ORTHO05D006487 9.7e-08 61.2 90 41.1
Sed0010490 Sechium edule HOM05D005056 ORTHO05D006487 9.7e-08 61.2 89 43.8
SEGI_33254 Sequoiadendron giganteum HOM05D005056 ORTHO05D006487 9.7e-08 61.2 104 37.5
Solyc11g072390.2 Solanum lycopersicum HOM05D005056 ORTHO05D006487 9.7e-08 61.2 90 38.9
CDE04G2996 Ceratophyllum demersum HOM05D005056 ORTHO05D006487 1.3e-07 60.8 123 34.1
Nitab4.5_0001802g0080 Nicotiana tabacum HOM05D005056 ORTHO05D006487 1.3e-07 60.8 84 40.5
Lj7A489G23 Lonicera japonica HOM05D005056 ORTHO05D006487 2.8e-07 59.7 76 47.4
HPP92_014516 Vanilla planifolia HOM05D005056 ORTHO05D006487 3.7e-07 59.3 95 43.2
Aa31LG1G25370 Aethionema arabicum HOM05D005056 ORTHO05D006487 4.8e-07 58.9 84 41.7
Carub.0004s2618 Capsella rubella HOM05D005056 ORTHO05D006487 4.8e-07 58.9 91 39.6
Sopen11g029990 Solanum pennellii HOM05D005056 ORTHO05D006487 4.8e-07 58.9 90 37.8
AT2G43650 Arabidopsis thaliana HOM05D005056 ORTHO05D006487 8.2e-07 58.2 91 40.7
Cpa.g.sc114.8 Carica papaya HOM05D005056 ORTHO05D006487 1.1e-06 57.8 91 39.6
FAN04G0894 Fragaria x ananassa HOM05D005056 ORTHO05D006487 1.1e-06 57.8 81 42.0
FAN13G0846 Fragaria x ananassa HOM05D005056 ORTHO05D006487 1.1e-06 57.8 81 42.0
QL10p054991 Quercus lobata HOM05D005056 ORTHO05D006487 1.1e-06 57.8 89 44.9
CAN.G308.62 Capsicum annuum HOM05D005056 ORTHO05D006487 1.4e-06 57.4 90 36.7
FAN18G4484 Fragaria x ananassa HOM05D005056 ORTHO05D006487 1.4e-06 57.4 81 42.0
FvH4_5g27692 Fragaria vesca HOM05D005056 ORTHO05D006487 3.1e-06 56.2 81 42.0
Solyc11g072320.3 Solanum lycopersicum HOM05D005056 ORTHO05D006487 3.1e-06 56.2 90 36.7
FAN08G2023 Fragaria x ananassa HOM05D005056 ORTHO05D006487 4.1e-06 55.8 82 41.5
AL4G42470 Arabidopsis lyrata HOM05D005056 ORTHO05D006487 5.3e-06 55.5 91 38.5
RcHm_v2.0_Chr7g0219421 Rosa chinensis HOM05D005056 ORTHO05D006487 6.9e-06 55.1 81 40.7


User provided reference genes

Program Settings