Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04543 Selenicereus undatus HOM05D006440 ORTHO05D003987 0.0e+00 1174.1 578 100.0
EL10Ac3g05914 Beta vulgaris HOM05D006440 ORTHO05D003987 6.7e-270 933.7 594 78.6
AUR62015479 Chenopodium quinoa HOM05D006440 ORTHO05D003987 2.6e-261 905.2 597 78.1
Ah.07g207430 Amaranthus hybridus HOM05D006440 ORTHO05D003987 3.6e-255 884.8 589 75.6
AUR62002263 Chenopodium quinoa HOM05D006440 ORTHO05D003987 8.6e-249 863.6 683 67.5
GSVIVG01027730001 Vitis vinifera HOM05D006440 ORTHO05D003987 1.3e-244 849.7 596 70.8
CSS0026181 Camellia sinensis var. sinensis HOM05D006440 ORTHO05D003987 4.1e-243 844.7 597 70.0
QL06p016694 Quercus lobata HOM05D006440 ORTHO05D003987 1.3e-241 839.7 595 71.4
Rhsim04G0187900 Rhododendron simsii HOM05D006440 ORTHO05D003987 5.0e-241 837.8 630 67.3
Sed0013572 Sechium edule HOM05D006440 ORTHO05D003987 8.0e-239 830.5 595 69.6
CiPaw.02G114500 Carya illinoinensis HOM05D006440 ORTHO05D003987 1.8e-238 829.3 595 69.9
Atru.chr4.2134 Acer truncatum HOM05D006440 ORTHO05D003987 1.7e-236 822.8 598 69.7
Lalb_Chr02g0150571 Lupinus albus HOM05D006440 ORTHO05D003987 6.4e-236 820.8 595 68.4
CsaV3_3G012320 Cucumis sativus L. HOM05D006440 ORTHO05D003987 1.1e-235 820.1 596 68.1
Ciclev10004596m.g Citrus clementina HOM05D006440 ORTHO05D003987 3.2e-235 818.5 597 68.3
HanXRQChr13g0418761 Helianthus annuus HOM05D006440 ORTHO05D003987 4.1e-235 818.1 598 67.7
MELO3C006441.2 Cucumis melo HOM05D006440 ORTHO05D003987 9.2e-235 817.0 598 67.6
Eucgr.H03137 Eucalyptus grandis HOM05D006440 ORTHO05D003987 2.3e-233 812.4 596 68.3
Manes.03G166900 Manihot esculenta HOM05D006440 ORTHO05D003987 2.3e-233 812.4 595 67.9
TAR365G0504 Trochodendron aralioides HOM05D006440 ORTHO05D003987 2.3e-233 812.4 596 68.6
Sc25g0004030 Simmondsia chinensis HOM05D006440 ORTHO05D003987 8.6e-233 810.4 529 76.2
Duzib212G0326 Durio zibethinus HOM05D006440 ORTHO05D003987 1.9e-232 809.3 596 68.1
DCAR_027296 Daucus carota HOM05D006440 ORTHO05D003987 1.2e-231 806.6 595 67.7
Nn1g02707 Nelumbo nucifera HOM05D006440 ORTHO05D003987 1.6e-231 806.2 601 67.4
vmacro08450 Vaccinium macrocarpon HOM05D006440 ORTHO05D003987 3.6e-231 805.1 669 63.4
Cc03_g05160 Coffea canephora HOM05D006440 ORTHO05D003987 2.3e-230 802.4 602 65.9
Gohir.A09G225400 Gossypium hirsutum HOM05D006440 ORTHO05D003987 2.6e-229 798.9 596 68.1
Prupe.1G035000 Prunus persica HOM05D006440 ORTHO05D003987 3.4e-229 798.5 595 68.1
CANSAT78G1511 Cannabis sativa HOM05D006440 ORTHO05D003987 9.8e-229 797.0 597 67.2
Sopen09g032600 Solanum pennellii HOM05D006440 ORTHO05D003987 9.8e-229 797.0 594 67.7
CAN.G793.7 Capsicum annuum HOM05D006440 ORTHO05D003987 1.3e-228 796.6 597 67.3
Ca_09816_v3 Cicer arietinum L. HOM05D006440 ORTHO05D003987 1.1e-227 793.5 597 67.0
Potri.010G073600 Populus trichocarpa HOM05D006440 ORTHO05D003987 1.9e-227 792.7 595 67.7
COL.COLO4_15832 Corchorus olitorius HOM05D006440 ORTHO05D003987 3.2e-227 792.0 596 67.1
Potri.008G165000 Populus trichocarpa HOM05D006440 ORTHO05D003987 4.1e-227 791.6 595 67.4
Gohir.D09G227100 Gossypium hirsutum HOM05D006440 ORTHO05D003987 5.4e-227 791.2 594 67.7
Lj5g0005322 Lotus japonicus HOM05D006440 ORTHO05D003987 1.2e-226 790.0 597 67.5
TWI09G0180 Tripterygium wilfordii HOM05D006440 ORTHO05D003987 7.8e-226 787.3 595 67.2
SalBow2G2218 Salvia bowleyana HOM05D006440 ORTHO05D003987 6.6e-225 784.3 617 65.5
Dinv29887 Davidia involucrata HOM05D006440 ORTHO05D003188 1.9e-224 782.7 554 72.0
Medtr1g073920 Medicago truncatula HOM05D006440 ORTHO05D003987 5.6e-224 781.2 598 65.4
MD13G1210600 Malus domestica HOM05D006440 ORTHO05D003987 1.6e-223 779.6 595 65.9
Phvul.007G129000 Phaseolus vulgaris HOM05D006440 ORTHO05D003987 6.2e-223 777.7 594 64.3
Migut.G00449 Erythranthe guttata HOM05D006440 ORTHO05D003987 8.1e-223 777.3 597 65.8
arahy.Tifrunner.gnm1.ann1.WJ3SQN Arachis hypogaea HOM05D006440 ORTHO05D003987 1.1e-222 776.9 583 67.1
ECA240G3037 Erigeron canadensis HOM05D006440 ORTHO05D003987 1.4e-222 776.5 578 67.0
VMungo0720G1034 Vigna mungo HOM05D006440 ORTHO05D003987 1.8e-222 776.2 594 64.8
ClCG05G004420 Citrullus lanatus HOM05D006440 ORTHO05D003987 1.2e-221 773.5 634 61.4
PGR004G0512 Punica granatum HOM05D006440 ORTHO05D003987 2.0e-221 772.7 593 64.6
Glyma.20G202700 Glycine max HOM05D006440 ORTHO05D003987 2.6e-221 772.3 595 65.5
MSTRG.9914 Avicennia marina HOM05D006440 ORTHO05D003987 3.4e-221 771.9 597 65.8
Glyma.10G188100 Glycine max HOM05D006440 ORTHO05D003987 5.8e-221 771.2 594 64.8
Lsat_1_v5_gn_3_121341 Lactuca sativa HOM05D006440 ORTHO05D003987 1.1e-219 766.9 597 65.8
arahy.Tifrunner.gnm1.ann1.A0C0SS Arachis hypogaea HOM05D006440 ORTHO05D003987 1.6e-218 763.1 594 65.5
FAN17G2886 Fragaria x ananassa HOM05D006440 ORTHO05D003987 5.1e-217 758.1 597 64.5
RcHm_v2.0_Chr4g0391871 Rosa chinensis HOM05D006440 ORTHO05D003987 2.5e-216 755.7 598 63.5
MBI18_g37356_MAGBIO Magnolia biondii HOM05D006440 ORTHO05D003987 5.6e-216 754.6 644 60.1
FvH4_4g03210 Fragaria vesca HOM05D006440 ORTHO05D003987 1.1e-214 750.4 597 64.2
SGA_v2.0_scaffold88G27269 Striga asiatica HOM05D006440 ORTHO05D003987 1.4e-214 750.0 594 65.3
Aqoxy2G03617 Aquilegia oxysepala HOM05D006440 ORTHO05D003987 1.2e-213 746.9 595 63.4
PSO017G7287 Papaver somniferum HOM05D006440 ORTHO05D003987 1.7e-212 743.0 592 62.3
Sabra10G0034700 Salix brachista HOM05D006440 ORTHO05D003987 6.4e-212 741.1 636 61.8
PSO063G3815 Papaver somniferum HOM05D006440 ORTHO05D003987 4.2e-211 738.4 592 61.8
Oeu025570.2 Olea europaea HOM05D006440 ORTHO05D000397 2.4e-206 722.6 534 67.8
THA.LOC104815988 Tarenaya hassleriana HOM05D006440 ORTHO05D003987 3.4e-205 718.8 596 61.6
FAN12G1575 Fragaria x ananassa HOM05D006440 ORTHO05D003987 3.8e-204 715.3 597 62.0
Gorai.006G249000 Gossypium raimondii HOM05D006440 ORTHO05D003987 3.8e-204 715.3 556 66.5
Psat6g132960 Pisum sativum HOM05D006440 ORTHO05D003987 2.4e-203 712.6 595 62.0
FAN22G0224 Fragaria x ananassa HOM05D006440 ORTHO05D003987 5.4e-203 711.4 597 61.6
Solyc09g089660.4 Solanum lycopersicum HOM05D006440 ORTHO05D003987 1.6e-202 709.9 547 66.4
Sp2g08350 Schrenkiella parvula HOM05D006440 ORTHO05D003987 3.0e-201 705.7 597 60.0
C02p44000 Brassica napus HOM05D006440 ORTHO05D003987 3.6e-199 698.7 598 59.4
Thhalv10003170m.g Eutrema salsugineum HOM05D006440 ORTHO05D003987 4.0e-198 695.3 596 58.7
BcaC03g16584 Brassica carinata HOM05D006440 ORTHO05D003987 9.0e-198 694.1 599 59.3
BolC2t10447H Brassica oleracea HOM05D006440 ORTHO05D003987 1.2e-197 693.7 598 59.2
BcaB07g30569 Brassica carinata HOM05D006440 ORTHO05D003987 2.6e-197 692.6 594 58.6
A02p27870 Brassica napus HOM05D006440 ORTHO05D003987 6.0e-194 681.4 596 57.9
BraA02t07826Z Brassica rapa HOM05D006440 ORTHO05D003987 6.0e-194 681.4 596 57.9
Actinidia04464 Actinidia chinensis HOM05D006440 ORTHO05D003987 7.9e-194 681.0 517 66.9
Peaxi162Scf00024g01821 Petunia axillaris HOM05D006440 ORTHO05D003987 1.9e-192 676.4 530 64.9
CDE06G0279 Ceratophyllum demersum HOM05D006440 ORTHO05D003987 8.1e-191 671.0 597 59.3
Thecc.04G250600 Theobroma cacao HOM05D006440 ORTHO05D003987 4.0e-190 668.7 594 59.4
ATR0680G034 Amborella trichopoda HOM05D006440 ORTHO05D003987 5.3e-190 668.3 572 61.4
Lj6A660T45 Lonicera japonica HOM05D006440 ORTHO05D003987 1.2e-189 667.2 609 58.9
Nitab4.5_0008345g0020 Nicotiana tabacum HOM05D006440 ORTHO05D003987 7.6e-189 664.5 507 65.9
AT5G43500 Arabidopsis thaliana HOM05D006440 ORTHO05D003987 3.8e-188 662.1 594 57.1
AL8G16820 Arabidopsis lyrata HOM05D006440 ORTHO05D003987 1.1e-187 660.6 594 57.4
Aa31LG5G3660 Aethionema arabicum HOM05D006440 ORTHO05D003987 2.5e-187 659.4 595 57.5
Os04g0177600 Oryza sativa ssp. japonica HOM05D006440 ORTHO05D003987 5.5e-187 658.3 597 57.0
Manes.15G038500 Manihot esculenta HOM05D006440 ORTHO05D003987 7.4e-184 647.9 588 59.5
Haze_11338 Corylus avellana HOM05D006440 ORTHO05D003987 8.2e-183 644.4 655 54.5
unitig_748.g7321 Utricularia gibba HOM05D006440 ORTHO05D003987 3.1e-182 642.5 619 55.4
CARHR180120 Cardamine hirsuta HOM05D006440 ORTHO05D003987 1.0e-180 637.5 596 55.0
Carub.0008s0511 Capsella rubella HOM05D006440 ORTHO05D003987 1.5e-176 623.6 557 57.1
TPR.G26431 Trifolium pratense HOM05D006440 ORTHO05D003987 9.7e-176 620.9 485 65.8
Nitab4.5_0000342g0190 Nicotiana tabacum HOM05D006440 ORTHO05D003987 8.0e-154 548.1 529 55.8
Psat2g067040 Pisum sativum HOM05D006440 ORTHO05D003987 6.3e-143 511.9 379 67.0
HPP92_008424 Vanilla planifolia HOM05D006440 ORTHO05D003987 7.0e-126 455.3 393 59.0
Pp3c3_14850 Physcomitrium patens HOM05D006440 ORTHO05D003987 1.6e-125 454.1 610 44.1
Mapoly0028s0034 Marchantia polymorpha HOM05D006440 ORTHO05D003987 2.6e-120 436.8 438 51.8
SMO117G0008 Selaginella moellendorffii HOM05D006440 ORTHO05D003987 2.5e-115 420.2 595 40.3
MD16G1213700 Malus domestica HOM05D006440 ORTHO05D003987 8.7e-100 368.6 519 45.3
PGSC0003DMG400017256 Solanum tuberosum HOM05D006440 ORTHO05D003987 1.9e-86 324.3 243 65.4
Zm00001eb087470 Zea mays HOM05D006440 ORTHO05D003987 1.8e-73 281.2 285 53.7
Cpa.g.sc44.85 Carica papaya HOM05D006440 ORTHO05D003987 2.7e-69 267.3 203 65.5
Zm00001eb087460 Zea mays HOM05D006440 ORTHO05D003987 3.0e-68 263.8 250 53.6
CBR_g37544 Chara braunii HOM05D000019 ORTHO05D000002 8.2e-66 255.8 620 32.7
HPP92_027995 Vanilla planifolia HOM05D006440 ORTHO05D003987 1.2e-45 188.7 167 56.3
HanXRQChr13g0422471 Helianthus annuus HOM05D006440 ORTHO05D003987 7.4e-43 179.5 196 52.6
HPP92_008423 Vanilla planifolia HOM05D006440 ORTHO05D003987 2.0e-32 144.8 146 52.7
SEGI_34555 Sequoiadendron giganteum HOM05D006440 ORTHO05D003987 4.5e-32 143.7 130 57.7
Dinv44661 Davidia involucrata HOM05D006440 ORTHO05D003987 1.9e-30 138.3 101 70.3
HanXRQChr13g0422461 Helianthus annuus HOM05D006440 ORTHO05D003987 1.6e-29 135.2 81 71.6
Hma1.2p1_1716F.1_g299120 Hydrangea macrophylla HOM05D006440 ORTHO05D003987 9.8e-27 125.9 63 87.3
Cfa026271 Carpinus fangiana HOM05D006440 ORTHO05D003987 9.2e-17 92.8 403 24.3
SHI00689 Sapria himalayana HOM05D006440 ORTHO05D003987 1.2e-13 82.4 52 80.8
SHI00694 Sapria himalayana HOM05D006440 ORTHO05D003987 2.2e-10 71.6 78 53.8
Nn5g28601 Nelumbo nucifera HOM05D006440 ORTHO05D003987 2.9e-10 71.2 63 54.0
MD16G1213300 Malus domestica HOM05D006440 ORTHO05D003987 4.6e-08 63.9 45 57.8
Haze_11337 Corylus avellana HOM05D006440 ORTHO05D003987 1.7e-07 62.0 33 87.9
arahy.Tifrunner.gnm1.ann1.IPBD8F Arachis hypogaea HOM05D002333 ORTHO05D003987 5.0e-07 60.5 36 80.6
SHI00693 Sapria himalayana HOM05D006440 ORTHO05D003987 1.5e-06 58.9 40 65.0


User provided reference genes

Program Settings