Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 5.1e-56 220.7 101 100.0
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 3.2e-18 95.1 75 62.7
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 7.2e-18 94.0 94 51.1
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 2.1e-17 92.4 89 48.3
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 2.1e-17 92.4 70 61.4
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 4.7e-17 91.3 73 58.9
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 7.9e-17 90.5 95 52.6
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 7.9e-17 90.5 95 52.6
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 7.9e-17 90.5 95 52.6
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 1.0e-16 90.1 71 64.8
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 1.0e-16 90.1 70 64.3
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 1.8e-16 89.4 70 60.0
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 1.8e-16 89.4 71 64.8
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 1.8e-16 89.4 71 63.4
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 1.8e-16 89.4 71 62.0
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 2.3e-16 89.0 75 60.0
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 2.3e-16 89.0 70 57.1
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 2.3e-16 89.0 71 62.0
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 3.9e-16 88.2 70 64.3
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 6.7e-16 87.4 71 62.0
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 1.5e-15 86.3 90 50.0
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 2.0e-15 85.9 71 60.6
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 2.0e-15 85.9 72 56.9
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 2.6e-15 85.5 70 55.7
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 3.3e-15 85.1 72 62.5
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 3.3e-15 85.1 85 54.1
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 3.3e-15 85.1 71 63.4
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 4.4e-15 84.7 90 48.9
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 4.4e-15 84.7 71 57.7
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 4.4e-15 84.7 71 59.2
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 4.4e-15 84.7 70 61.4
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 4.4e-15 84.7 71 59.2
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 4.4e-15 84.7 70 55.7
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 5.7e-15 84.3 72 52.8
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 5.7e-15 84.3 71 57.7
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 5.7e-15 84.3 70 55.7
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 7.4e-15 84.0 71 59.2
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 9.7e-15 83.6 76 57.9
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 9.7e-15 83.6 71 56.3
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 9.7e-15 83.6 71 56.3
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 9.7e-15 83.6 71 56.3
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 9.7e-15 83.6 73 57.5
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 9.7e-15 83.6 85 48.2
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 1.3e-14 83.2 71 62.0
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 1.7e-14 82.8 73 58.9
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 1.7e-14 82.8 72 56.9
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 1.7e-14 82.8 70 58.6
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 1.7e-14 82.8 71 60.6
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 1.7e-14 82.8 71 60.6
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 1.7e-14 82.8 70 54.3
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 2.2e-14 82.4 71 60.6
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 2.2e-14 82.4 82 53.7
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 2.2e-14 82.4 92 48.9
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 2.8e-14 82.0 95 46.3
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.8e-14 82.0 72 58.3
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.8e-14 82.0 72 58.3
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 2.8e-14 82.0 72 58.3
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 2.8e-14 82.0 70 55.7
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 2.8e-14 82.0 70 55.7
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 3.7e-14 81.6 70 52.9
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 3.7e-14 81.6 69 56.5
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 3.7e-14 81.6 71 62.0
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 3.7e-14 81.6 70 52.9
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 3.7e-14 81.6 70 55.7
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 3.7e-14 81.6 70 60.0
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 4.8e-14 81.3 72 55.6
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 6.3e-14 80.9 72 59.7
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 8.2e-14 80.5 86 51.2
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 8.2e-14 80.5 86 50.0
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 8.2e-14 80.5 70 57.1
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 1.1e-13 80.1 70 55.7
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 1.1e-13 80.1 72 58.3
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 1.4e-13 79.7 74 54.1
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 1.8e-13 79.3 86 50.0
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 1.8e-13 79.3 71 57.7
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 1.8e-13 79.3 71 57.7
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 1.8e-13 79.3 71 57.7
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 1.8e-13 79.3 73 56.2
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 2.4e-13 79.0 70 54.3
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 2.4e-13 79.0 72 54.2
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 2.4e-13 79.0 70 55.7
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 2.4e-13 79.0 69 53.6
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 3.1e-13 78.6 72 54.2
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 3.1e-13 78.6 70 55.7
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 3.1e-13 78.6 72 55.6
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 4.1e-13 78.2 70 52.9
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 5.3e-13 77.8 72 48.6
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 5.3e-13 77.8 116 38.8
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 5.3e-13 77.8 72 55.6
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 7.0e-13 77.4 70 57.1
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 9.1e-13 77.0 71 57.7
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 9.1e-13 77.0 72 56.9
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 9.1e-13 77.0 72 56.9
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 9.1e-13 77.0 74 55.4
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 9.1e-13 77.0 70 48.6
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 1.2e-12 76.6 73 54.8
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 1.6e-12 76.3 73 54.8
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 1.6e-12 76.3 73 54.8
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 1.6e-12 76.3 73 54.8
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 1.6e-12 76.3 73 54.8
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 1.6e-12 76.3 74 55.4
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 2.6e-12 75.5 73 53.4
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 2.6e-12 75.5 73 52.1
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 3.5e-12 75.1 85 48.2
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 3.5e-12 75.1 76 51.3
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 3.5e-12 75.1 76 51.3
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.0e-11 73.6 70 48.6
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 1.7e-11 72.8 70 44.3
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 2.2e-11 72.4 73 52.1
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 2.2e-11 72.4 73 52.1
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 6.5e-11 70.9 73 52.1
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 2.5e-10 68.9 69 50.7
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 2.7e-09 65.5 53 60.4
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 3.6e-09 65.1 74 47.3
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 2.3e-08 62.4 75 48.0
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 4.0e-08 61.6 89 38.2
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 7.5e-07 57.4 49 55.1
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 1.7e-06 56.2 67 43.3
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 6.3e-06 54.3 61 44.3
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 6.3e-06 54.3 74 39.2


User provided reference genes

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