Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03771 Selenicereus undatus HOM05D005896 ORTHO05D007250 1.9e-161 572.4 276 100.0
Atru.chr8.2358 Acer truncatum HOM05D005896 ORTHO05D007250 7.3e-89 331.3 244 64.8
Dinv35431 Davidia involucrata HOM05D005896 ORTHO05D007250 2.4e-87 326.2 238 67.6
Ciclev10011082m.g Citrus clementina HOM05D005896 ORTHO05D007250 4.0e-87 325.5 244 65.2
Lj1g0024727 Lotus japonicus HOM05D005896 ORTHO05D007250 6.8e-87 324.7 238 66.8
Potri.006G106000 Populus trichocarpa HOM05D005896 ORTHO05D007250 1.2e-86 323.9 244 66.0
RcHm_v2.0_Chr3g0461101 Rosa chinensis HOM05D005896 ORTHO05D007250 2.0e-86 323.2 238 65.5
FvH4_6g10330 Fragaria vesca HOM05D005896 ORTHO05D007250 3.4e-86 322.4 238 65.5
Glyma.09G279500 Glycine max HOM05D005896 ORTHO05D007250 9.9e-86 320.9 238 66.0
HanXRQChr12g0363731 Helianthus annuus HOM05D005896 ORTHO05D007250 1.3e-85 320.5 238 63.9
HanXRQChr16g0509701 Helianthus annuus HOM05D005896 ORTHO05D007250 1.3e-85 320.5 238 63.9
Glyma.18G209600 Glycine max HOM05D005896 ORTHO05D007250 1.7e-85 320.1 238 65.1
Thecc.05G004100 Theobroma cacao HOM05D005896 ORTHO05D007250 2.2e-85 319.7 238 65.5
TWI77G0262 Tripterygium wilfordii HOM05D005896 ORTHO05D007250 2.9e-85 319.3 244 64.3
Rhsim05G0227300 Rhododendron simsii HOM05D005896 ORTHO05D007250 6.4e-85 318.2 238 65.1
Gohir.D04G136000 Gossypium hirsutum HOM05D005896 ORTHO05D007250 8.4e-85 317.8 238 65.5
AUR62006318 Chenopodium quinoa HOM05D005896 ORTHO05D007250 1.9e-84 316.6 278 61.5
Gorai.012G119800 Gossypium raimondii HOM05D005896 ORTHO05D007250 2.4e-84 316.2 238 65.5
Sabra06G0082600 Salix brachista HOM05D005896 ORTHO05D007250 2.4e-84 316.2 244 63.1
VMungo1383G2905 Vigna mungo HOM05D005896 ORTHO05D007250 7.1e-84 314.7 238 64.7
Gohir.A04G096200 Gossypium hirsutum HOM05D005896 ORTHO05D007250 9.2e-84 314.3 238 65.1
Lalb_Chr01g0023511 Lupinus albus HOM05D005896 ORTHO05D007250 3.5e-83 312.4 238 64.3
TAR623G1464 Trochodendron aralioides HOM05D005896 ORTHO05D007250 6.0e-83 311.6 238 64.3
MELO3C009120.2 Cucumis melo HOM05D005896 ORTHO05D007250 7.8e-83 311.2 238 63.9
Ca_26097_v3 Cicer arietinum L. HOM05D005896 ORTHO05D007250 1.0e-82 310.8 238 64.7
MD12G1182400 Malus domestica HOM05D005896 ORTHO05D007250 1.0e-82 310.8 238 62.2
Medtr7g071990 Medicago truncatula HOM05D005896 ORTHO05D007250 1.0e-82 310.8 238 65.5
GSVIVG01030240001 Vitis vinifera HOM05D005896 ORTHO05D007250 1.0e-82 310.8 238 64.3
MD04G1168900 Malus domestica HOM05D005896 ORTHO05D007250 1.7e-82 310.1 260 58.8
Lj2A64G51 Lonicera japonica HOM05D005896 ORTHO05D007250 2.3e-82 309.7 243 65.0
CiPaw.09G216900 Carya illinoinensis HOM05D005896 ORTHO05D007250 3.0e-82 309.3 238 63.9
Manes.09G113900 Manihot esculenta HOM05D005896 ORTHO05D007250 3.0e-82 309.3 238 64.7
CAN.G738.1 Capsicum annuum HOM05D005896 ORTHO05D007250 3.9e-82 308.9 238 63.9
Peaxi162Scf00009g01011 Petunia axillaris HOM05D005896 ORTHO05D007250 3.9e-82 308.9 238 63.9
Prupe.6G287100 Prunus persica HOM05D005896 ORTHO05D007250 5.1e-82 308.5 238 62.2
CSS0019926 Camellia sinensis var. sinensis HOM05D005896 ORTHO05D007250 6.6e-82 308.1 238 63.4
CSS0029745 Camellia sinensis var. sinensis HOM05D005896 ORTHO05D007250 6.6e-82 308.1 238 63.4
arahy.Tifrunner.gnm1.ann1.2FTV5P Arachis hypogaea HOM05D005896 ORTHO05D007250 8.7e-82 307.8 238 63.0
Haze_21109 Corylus avellana HOM05D005896 ORTHO05D007250 8.7e-82 307.8 238 63.0
ECA236G3210 Erigeron canadensis HOM05D005896 ORTHO05D007250 8.7e-82 307.8 238 62.2
CsaV3_3G033280 Cucumis sativus L. HOM05D005896 ORTHO05D007250 1.1e-81 307.4 238 63.0
Eucgr.A00643 Eucalyptus grandis HOM05D005896 ORTHO05D007250 1.1e-81 307.4 238 63.4
Oeu023744.1 Olea europaea HOM05D005896 ORTHO05D007250 1.1e-81 307.4 238 62.2
Psat3g120600 Pisum sativum HOM05D005896 ORTHO05D007250 1.1e-81 307.4 238 64.3
Actinidia11539 Actinidia chinensis HOM05D005896 ORTHO05D007250 1.5e-81 307.0 238 64.3
arahy.Tifrunner.gnm1.ann1.Q3Q3XE Arachis hypogaea HOM05D005896 ORTHO05D007250 1.5e-81 307.0 238 63.0
Cfa017090 Carpinus fangiana HOM05D005896 ORTHO05D007250 1.5e-81 307.0 238 62.6
Sed0010587 Sechium edule HOM05D005896 ORTHO05D007250 1.9e-81 306.6 238 63.0
TPR.G18656 Trifolium pratense HOM05D005896 ORTHO05D007250 2.5e-81 306.2 238 63.9
Sc02g0000680 Simmondsia chinensis HOM05D005896 ORTHO05D007250 5.6e-81 305.1 238 63.4
CANSAT35G1655 Cannabis sativa HOM05D005896 ORTHO05D007250 7.3e-81 304.7 238 63.4
Phvul.008G089700 Phaseolus vulgaris HOM05D005896 ORTHO05D007250 7.3e-81 304.7 238 62.6
PGSC0003DMG400011105 Solanum tuberosum HOM05D005896 ORTHO05D007250 7.3e-81 304.7 238 62.6
Cc06_g00650 Coffea canephora HOM05D005896 ORTHO05D007250 9.6e-81 304.3 238 63.9
vmacro20337 Vaccinium macrocarpon HOM05D005896 ORTHO05D007250 1.2e-80 303.9 238 63.4
MSTRG.5530 Avicennia marina HOM05D005896 ORTHO05D007250 1.6e-80 303.5 238 63.9
FAN02G1083 Fragaria x ananassa HOM05D005896 ORTHO05D007250 1.6e-80 303.5 248 62.1
Lsat_1_v5_gn_8_105740 Lactuca sativa HOM05D005896 ORTHO05D007250 1.6e-80 303.5 238 60.9
Sopen10g034850 Solanum pennellii HOM05D005896 ORTHO05D007250 1.6e-80 303.5 238 62.2
FAN05G0609 Fragaria x ananassa HOM05D005896 ORTHO05D007250 2.1e-80 303.1 248 61.7
CAN.G1288.7 Capsicum annuum HOM05D005896 ORTHO05D007250 4.7e-80 302.0 241 62.2
Solyc10g085400.3 Solanum lycopersicum HOM05D005896 ORTHO05D007250 4.7e-80 302.0 238 61.8
QL07p033519 Quercus lobata HOM05D005896 ORTHO05D007250 6.2e-80 301.6 238 62.2
FAN14G5183 Fragaria x ananassa HOM05D005896 ORTHO05D007250 8.1e-80 301.2 248 61.7
Nitab4.5_0004057g0040 Nicotiana tabacum HOM05D005896 ORTHO05D007250 8.1e-80 301.2 239 64.0
Aqoxy2G00762 Aquilegia oxysepala HOM05D005896 ORTHO05D007250 1.2e-78 297.4 238 63.9
SalBow5G4224 Salvia bowleyana HOM05D005896 ORTHO05D007250 2.6e-78 296.2 238 62.6
Thhalv10020004m.g Eutrema salsugineum HOM05D005896 ORTHO05D007250 3.4e-78 295.8 238 60.1
Aa31LG5G18810 Aethionema arabicum HOM05D005896 ORTHO05D007250 4.4e-78 295.4 238 58.4
AT3G08840 Arabidopsis thaliana HOM05D005896 ORTHO05D007250 4.4e-78 295.4 238 60.5
AL3G19830 Arabidopsis lyrata HOM05D005896 ORTHO05D007250 5.8e-78 295.0 238 60.1
Carub.0003s0795 Capsella rubella HOM05D005896 ORTHO05D007250 1.3e-77 293.9 238 59.2
BcaB04g18571 Brassica carinata HOM05D005896 ORTHO05D007250 2.2e-77 293.1 238 58.4
CARHR083150 Cardamine hirsuta HOM05D005896 ORTHO05D007250 2.2e-77 293.1 238 59.2
FAN05G5239 Fragaria x ananassa HOM05D005896 ORTHO05D007250 2.2e-77 293.1 274 55.8
C03p43970 Brassica napus HOM05D005896 ORTHO05D007250 3.8e-77 292.4 238 58.4
Nn2g11051 Nelumbo nucifera HOM05D005896 ORTHO05D007250 4.9e-77 292.0 238 61.8
BcaC01g04196 Brassica carinata HOM05D005896 ORTHO05D007250 6.4e-77 291.6 238 58.0
Migut.J00081 Erythranthe guttata HOM05D005896 ORTHO05D007250 1.1e-76 290.8 238 62.6
BcaC09g49362 Brassica carinata HOM05D005896 ORTHO05D007250 1.4e-76 290.4 238 58.4
BraA03t12806Z Brassica rapa HOM05D005896 ORTHO05D007250 1.9e-76 290.0 237 58.2
BcaB04g20289 Brassica carinata HOM05D005896 ORTHO05D007250 2.4e-76 289.7 238 57.6
ATR0681G081 Amborella trichopoda HOM05D005896 ORTHO05D007250 5.4e-76 288.5 238 60.1
C01p37440 Brassica napus HOM05D005896 ORTHO05D007250 5.4e-76 288.5 238 58.0
AUR62026359 Chenopodium quinoa HOM05D005896 ORTHO05D007250 7.1e-76 288.1 224 67.4
BraA01t03093Z Brassica rapa HOM05D005896 ORTHO05D007250 1.2e-75 287.3 238 57.6
BolC3t16668H Brassica oleracea HOM05D005896 ORTHO05D007250 1.6e-75 287.0 238 58.0
BolC1t03711H Brassica oleracea HOM05D005896 ORTHO05D007250 2.7e-75 286.2 238 57.6
THA.LOC104823308 Tarenaya hassleriana HOM05D005896 ORTHO05D007250 2.7e-75 286.2 238 60.5
A03p36350 Brassica napus HOM05D005896 ORTHO05D007250 1.3e-74 283.9 237 57.4
A03p36380 Brassica napus HOM05D005896 ORTHO05D007250 1.3e-74 283.9 237 57.4
PSO339G6300 Papaver somniferum HOM05D005896 ORTHO05D007250 1.3e-74 283.9 238 58.8
FAN09G0048 Fragaria x ananassa HOM05D005896 ORTHO05D007250 1.3e-72 277.3 239 59.8
A01p29640 Brassica napus HOM05D005896 ORTHO05D007250 2.8e-72 276.2 238 55.0
ClCG10G022550 Citrullus lanatus HOM05D005896 ORTHO05D007250 2.4e-71 273.1 319 47.0
HPP92_013852 Vanilla planifolia HOM05D005896 ORTHO05D007250 1.3e-69 267.3 244 55.3
HPP92_013866 Vanilla planifolia HOM05D005896 ORTHO05D007250 2.1e-67 260.0 244 54.5
Os07g0691200 Oryza sativa ssp. japonica HOM05D005896 ORTHO05D007250 4.6e-67 258.8 238 54.2
SEGI_19702 Sequoiadendron giganteum HOM05D005896 ORTHO05D007250 1.8e-66 256.9 238 55.9
Zm00001eb111890 Zea mays HOM05D005896 ORTHO05D007250 1.3e-64 250.8 238 52.1
FAN14G5591 Fragaria x ananassa HOM05D005896 ORTHO05D007250 2.1e-64 250.0 226 55.8
Nitab4.5_0001703g0070 Nicotiana tabacum HOM05D005896 ORTHO05D007250 2.8e-64 249.6 198 63.1
DCAR_028898 Daucus carota HOM05D005896 ORTHO05D007250 3.7e-48 196.1 155 64.5
Actinidia26603 Actinidia chinensis HOM05D005896 ORTHO05D007250 5.9e-46 188.7 155 63.2
SMO228G0083 Selaginella moellendorffii HOM05D005896 ORTHO05D007250 9.4e-44 181.4 240 42.1
Mapoly0266s0003 Marchantia polymorpha HOM05D005896 ORTHO05D007250 3.6e-43 179.5 250 40.4
Pp3c18_18940 Physcomitrium patens HOM05D005896 ORTHO05D007250 5.9e-38 162.2 244 38.5
COL.COLO4_14429 Corchorus olitorius HOM05D005896 ORTHO05D007250 1.4e-36 157.5 238 40.8
Hma1.2p1_2300F.1_g319233 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 3.2e-28 129.8 81 77.8
Hma1.2p1_2300F.1_g319236 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 3.2e-28 129.8 81 77.8
AagrBONN_evm.TU.Sc2ySwM_362.2825 Anthoceros agrestis HOM05D005896 ORTHO05D007250 3.9e-26 122.9 156 43.6
Hma1.2p1_2300F.1_g319240 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 3.9e-26 122.9 85 65.9
PRCOL_00001217 Prasinoderma coloniale HOM05D005896 ORTHO05D007250 2.6e-25 120.2 246 36.6
CiPaw.01G264800 Carya illinoinensis HOM05D001401 ORTHO05D002222 2.8e-24 116.7 84 66.7
Hma1.2p1_3169F.1_g333550 Hydrangea macrophylla HOM05D005896 ORTHO05D007250 6.3e-16 89.0 57 71.9
CBR_g38233 Chara braunii HOM05D005896 ORTHO05D007250 9.8e-09 65.1 58 53.4
COL.COLO4_03233 Corchorus olitorius HOM05D005896 ORTHO05D007250 1.8e-07 60.8 145 33.1


User provided reference genes

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