Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 0.0e+00 1201.4 630 100.0
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.1e-185 654.1 684 55.3
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 1.5e-169 600.5 641 53.5
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 8.9e-167 591.3 642 54.5
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 7.3e-161 571.6 583 57.1
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 1.7e-141 507.3 669 46.9
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 1.7e-133 480.7 647 45.7
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 3.5e-131 473.0 652 45.4
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.8e-130 470.7 655 44.9
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 3.1e-127 459.9 700 42.7
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.5e-126 457.6 654 45.3
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 5.0e-125 452.6 654 45.1
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 5.0e-125 452.6 654 45.1
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 2.5e-124 450.3 650 44.2
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.0e-122 444.9 700 41.4
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 1.4e-122 444.5 700 41.6
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 3.9e-122 443.0 703 42.1
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 9.7e-121 438.3 707 41.7
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 1.7e-120 437.6 649 43.3
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 2.8e-120 436.8 649 43.9
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 4.8e-120 436.0 702 41.6
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 1.2e-118 431.4 646 42.9
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 2.0e-118 430.6 648 43.2
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 5.9e-118 429.1 664 43.1
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 4.2e-116 422.9 700 39.7
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 4.7e-115 419.5 702 39.6
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 4.7e-115 419.5 700 40.1
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.0e-114 418.3 700 40.7
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.2e-112 410.6 674 40.5
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 3.2e-108 396.7 705 38.3
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 3.6e-107 393.3 640 40.3
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 1.4e-106 391.3 625 43.5
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 1.1e-105 388.3 700 39.1
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 2.8e-104 383.6 634 42.1
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 6.3e-104 382.5 630 39.5
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 1.1e-103 381.7 631 41.2
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 4.5e-102 376.3 631 40.1
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.0e-101 375.2 650 39.4
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 8.5e-101 372.1 641 39.6
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.5e-100 371.3 639 39.9
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.8e-98 364.4 633 41.1
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 6.8e-98 362.5 649 37.9
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 8.8e-98 362.1 655 38.9
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 9.8e-97 358.6 650 38.3
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 6.3e-96 355.9 695 37.7
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.4e-95 354.8 626 39.0
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 1.8e-95 354.4 640 38.0
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 4.1e-95 353.2 701 37.1
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 5.9e-94 349.4 649 38.4
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 7.7e-94 349.0 705 36.6
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 1.3e-93 348.2 642 37.5
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.2e-92 343.2 664 37.8
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 8.8e-90 335.5 628 38.2
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 5.7e-89 332.8 661 36.5
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 1.8e-87 327.8 638 36.4
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 7.0e-87 325.9 629 38.5
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 9.2e-87 325.5 643 36.4
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 2.0e-86 324.3 644 37.0
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 5.9e-86 322.8 617 37.6
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 1.1e-84 318.5 311 54.7
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 2.1e-83 314.3 556 39.4
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 7.5e-81 305.8 619 35.1
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 1.7e-80 304.7 595 36.1
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 2.9e-80 303.9 569 38.1
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 4.9e-80 303.1 635 36.2
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 8.3e-80 302.4 540 38.7
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 8.3e-80 302.4 519 40.1
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 4.1e-79 300.1 629 35.5
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.6e-78 298.1 637 35.3
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 4.6e-78 296.6 659 35.4
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 6.6e-77 292.7 707 32.4
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 1.2e-75 288.5 646 35.0
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 2.1e-75 287.7 659 35.1
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 8.0e-75 285.8 663 34.5
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 4.0e-74 283.5 650 34.0
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 3.4e-73 280.4 636 33.6
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.4e-71 275.0 627 33.7
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 2.0e-70 271.2 638 34.2
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 4.6e-70 270.0 638 34.0
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 5.0e-69 266.5 637 34.4
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 5.0e-69 266.5 637 34.4
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 5.0e-69 266.5 637 34.4
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 1.5e-68 265.0 679 33.0
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 9.5e-68 262.3 478 38.1
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 9.5e-68 262.3 311 47.6
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 2.8e-67 260.8 634 34.4
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 1.4e-66 258.5 655 34.7
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.4e-66 258.5 473 40.0
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.7e-64 251.5 585 34.0
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 2.4e-63 247.7 640 34.8
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.1e-63 246.9 307 47.9
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 3.5e-62 243.8 635 32.3
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.5e-60 238.4 685 31.7
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.5e-60 237.7 255 49.8
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 3.3e-60 237.3 649 32.5
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 1.4e-58 231.9 633 33.0
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 8.9e-58 229.2 652 32.1
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 6.4e-56 223.0 353 39.9
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 1.1e-55 222.2 608 31.9
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.4e-55 221.9 650 32.2
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 1.2e-54 218.8 236 52.5
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 4.6e-54 216.9 323 41.8
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.3e-53 214.5 310 44.2
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 7.3e-52 209.5 659 32.8
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.2e-49 202.2 626 31.2
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 9.3e-47 192.6 255 45.9
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 3.0e-45 187.6 512 32.8
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.5e-44 184.5 427 35.4
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 5.1e-37 160.2 127 59.1
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 6.7e-37 159.8 142 54.9
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.3e-36 157.5 186 48.9
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 1.8e-34 151.8 338 34.0
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 4.5e-33 147.1 688 26.2
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 6.4e-32 143.3 306 35.0
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.3e-29 135.6 339 32.4
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 5.5e-23 113.6 296 32.8
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 4.6e-22 110.5 200 37.0
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 1.0e-21 109.4 79 63.3
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 1.8e-21 108.6 214 34.6
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 1.6e-19 102.1 226 32.3
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 5.0e-16 90.5 221 31.7
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 3.2e-15 87.8 326 29.1
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 1.8e-13 82.0 194 34.0
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 1.8e-13 82.0 188 35.1
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 3.9e-13 80.9 114 43.0
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.2e-09 69.3 78 46.2


User provided reference genes

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