Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 0.0e+00 1266.1 651 100.0
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.7e-211 739.2 650 60.8
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.3e-208 730.3 706 55.7
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 3.5e-198 695.7 647 56.9
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.3e-184 650.6 572 61.0
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 1.4e-178 630.6 656 52.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 8.9e-170 601.3 649 51.8
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 3.2e-159 566.2 651 49.2
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 8.7e-157 558.1 636 47.8
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.5e-156 557.4 722 46.1
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 5.6e-156 555.4 645 47.4
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 2.1e-155 553.5 654 47.7
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 1.8e-154 550.4 650 47.2
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 9.0e-154 548.1 659 48.1
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 9.0e-154 548.1 659 47.6
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 3.4e-153 546.2 655 48.4
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 3.4e-153 546.2 661 47.8
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 9.9e-153 544.7 657 47.5
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 8.4e-152 541.6 629 47.4
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.9e-151 540.4 659 46.6
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 4.2e-151 539.3 646 48.6
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 4.6e-150 535.8 649 45.8
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 7.9e-150 535.0 637 48.7
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 3.9e-149 532.7 659 46.1
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 6.7e-149 531.9 659 47.6
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.5e-148 530.8 684 44.7
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 1.9e-148 530.4 660 46.1
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 1.6e-147 527.3 658 45.3
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.8e-147 526.6 660 45.9
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 6.2e-147 525.4 640 46.7
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 8.1e-147 525.0 659 45.7
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.4e-146 524.2 644 46.7
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.8e-146 523.9 684 44.3
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.8e-146 523.9 631 46.0
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 2.4e-146 523.5 648 47.4
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 4.0e-146 522.7 684 44.4
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 4.0e-146 522.7 660 45.6
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 2.6e-145 520.0 709 43.7
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 3.4e-145 519.6 650 45.7
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.3e-144 517.7 640 46.2
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 1.1e-140 504.6 626 45.8
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.9e-140 503.8 660 45.3
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 5.6e-140 502.3 696 43.5
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 5.6e-140 502.3 650 46.0
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 2.8e-139 500.0 638 44.2
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.8e-138 497.3 660 45.0
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.4e-138 496.9 642 42.7
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 2.4e-138 496.9 631 44.2
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.0e-137 493.8 684 43.4
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 2.6e-137 493.4 640 45.5
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.1e-135 488.0 636 45.1
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.3e-131 474.6 636 42.8
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 2.6e-129 466.8 639 41.2
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.1e-127 461.5 649 43.6
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 4.2e-127 459.5 599 44.7
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 3.6e-126 456.4 660 42.6
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 4.6e-126 456.1 648 41.5
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.3e-125 453.8 641 43.7
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 2.3e-125 453.8 649 43.0
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 3.3e-124 449.9 659 42.6
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 8.2e-123 445.3 654 40.4
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.8e-122 444.1 623 43.7
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.5e-121 441.0 665 39.5
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 1.4e-119 434.5 621 41.9
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 4.2e-119 433.0 646 41.3
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 4.7e-118 429.5 630 41.4
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 3.0e-117 426.8 520 47.3
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 9.7e-116 421.8 633 40.0
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 1.3e-115 421.4 632 39.9
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 6.3e-115 419.1 648 39.0
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 5.0e-112 409.5 663 37.9
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 8.5e-112 408.7 650 39.7
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 3.0e-109 400.2 684 37.6
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.1e-108 398.3 580 41.9
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 2.6e-105 387.1 645 37.8
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.0e-104 385.2 656 37.0
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.3e-104 384.8 655 36.8
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 1.1e-103 381.7 661 36.5
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.0e-101 375.2 426 48.4
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 2.6e-100 370.5 656 36.0
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 7.7e-97 359.0 529 39.9
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.0e-96 358.6 656 34.8
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 1.1e-95 355.1 412 46.6
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.9e-95 354.4 402 48.0
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.9e-95 354.4 694 33.7
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 2.5e-95 354.0 579 37.3
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 4.4e-92 343.2 642 35.5
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 9.8e-92 342.0 660 31.4
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 1.3e-91 341.7 661 34.5
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 1.7e-91 341.3 624 36.1
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 2.2e-91 340.9 678 34.2
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.0e-88 332.0 543 39.8
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.0e-86 322.4 426 44.8
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.2e-85 319.7 426 44.8
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.3e-80 304.3 426 43.4
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.0e-76 291.2 418 43.3
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 2.4e-74 284.3 627 31.7
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 2.7e-73 280.8 383 43.9
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 1.7e-59 235.0 493 31.2
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 2.8e-54 217.6 324 42.9
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 1.7e-51 208.4 296 41.9
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.2e-49 202.2 506 30.8
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 8.1e-38 162.9 175 48.6
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 4.0e-37 160.6 284 34.2
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 4.5e-36 157.1 574 26.5
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.7e-32 142.9 95 77.9
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 6.2e-30 136.7 637 25.6
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 6.9e-29 133.3 148 43.2
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.2e-26 124.4 634 24.1
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 9.3e-26 122.9 302 28.8
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 3.5e-25 120.9 692 22.4
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 1.5e-23 115.5 601 23.0
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 1.5e-20 105.5 182 37.9
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 3.9e-16 90.9 96 50.0
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 1.9e-15 88.6 73 60.3
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 7.4e-15 86.7 134 37.3
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 8.5e-11 73.2 60 56.7
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.2e-10 71.2 68 51.5
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 3.2e-10 71.2 59 57.6
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.1e-09 68.6 60 55.0
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 2.5e-07 61.6 48 60.4
SEGI_39323 Sequoiadendron giganteum HOM05D006351 ORTHO05D007796 1.7e-06 58.9 120 35.8


User provided reference genes

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