Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund03317 Selenicereus undatus HOM05D006136 ORTHO05D007244 2.6e-246 855.1 484 100.0
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 1.1e-50 205.3 512 35.9
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 1.3e-40 171.8 561 33.9
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 8.4e-40 169.1 569 33.2
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 1.2e-33 148.7 376 35.9
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 2.9e-24 117.5 509 29.1
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 2.9e-24 117.5 483 30.0
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 4.2e-23 113.6 549 28.1
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 1.1e-20 105.5 514 27.0
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 7.4e-20 102.8 500 28.4
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 2.8e-19 100.9 303 31.4
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 8.2e-19 99.4 481 28.3
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 2.6e-17 94.4 493 27.0
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 4.5e-17 93.6 493 26.6
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 5.9e-17 93.2 484 27.5
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 7.7e-17 92.8 484 26.4
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 1.7e-16 91.7 490 26.9
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 2.2e-16 91.3 497 26.4
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 5.0e-16 90.1 548 27.7
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 6.5e-16 89.7 484 26.2
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 1.4e-15 88.6 500 28.2
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 5.5e-15 86.7 516 29.1
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 1.1e-12 79.0 529 24.8
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 4.4e-12 77.0 523 26.6
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 5.7e-12 76.6 524 26.9
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 7.4e-12 76.3 518 25.1
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 1.7e-11 75.1 356 27.2
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 8.2e-11 72.8 498 24.7
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 8.2e-11 72.8 554 25.5
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 9.1e-10 69.3 544 24.4
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 9.1e-10 69.3 529 26.5
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 1.2e-09 68.9 496 25.4
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 2.0e-09 68.2 529 26.5
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 2.6e-09 67.8 554 24.4
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 2.6e-09 67.8 494 25.1
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 4.5e-09 67.0 489 23.3
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 7.7e-09 66.2 515 24.9
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 7.7e-09 66.2 591 24.5
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 2.2e-08 64.7 488 26.0
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 5.0e-08 63.5 514 25.7
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 2.5e-07 61.2 535 23.9
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 3.2e-07 60.8 383 25.3
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 7.2e-07 59.7 156 35.3
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 1.6e-06 58.5 504 24.6
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 2.7e-06 57.8 409 25.7
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 4.7e-06 57.0 502 28.1
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 6.1e-06 56.6 561 23.9


User provided reference genes

Program Settings