Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02828 Selenicereus undatus HOM05D004826 ORTHO05D006367 3.2e-63 245.0 130 100.0
Hund27937 Selenicereus undatus HOM05D004826 ORTHO05D006367 3.2e-63 245.0 130 100.0
AUR62032326 Chenopodium quinoa HOM05D004826 ORTHO05D006367 2.0e-44 182.6 130 73.1
AUR62028599 Chenopodium quinoa HOM05D004826 ORTHO05D006367 7.5e-44 180.6 130 72.3
EL10Ac5g10541 Beta vulgaris HOM05D004826 ORTHO05D006367 6.4e-43 177.6 130 70.0
Sc17g0001330 Simmondsia chinensis HOM05D004826 ORTHO05D006367 1.2e-36 156.8 130 65.4
COL.COLO4_09064 Corchorus olitorius HOM05D004826 ORTHO05D003095 3.2e-34 148.7 130 64.6
Gohir.A12G004300 Gossypium hirsutum HOM05D004826 ORTHO05D006367 4.1e-34 148.3 130 63.1
Gohir.D12G004000 Gossypium hirsutum HOM05D004826 ORTHO05D006367 4.1e-34 148.3 130 63.1
TWI75G1621 Tripterygium wilfordii HOM05D004826 ORTHO05D006367 7.0e-34 147.5 130 64.6
Dinv34775 Davidia involucrata HOM05D004826 ORTHO05D006367 9.2e-34 147.1 130 62.3
Gorai.008G003800 Gossypium raimondii HOM05D004826 ORTHO05D006367 1.6e-33 146.4 130 62.3
Ciclev10020269m.g Citrus clementina HOM05D004826 ORTHO05D006367 6.0e-33 144.4 130 63.1
Duzib138G1281 Durio zibethinus HOM05D004826 ORTHO05D006367 1.0e-32 143.7 130 63.1
QL12p021024 Quercus lobata HOM05D004826 ORTHO05D006367 2.3e-32 142.5 129 62.0
GSVIVG01001175001 Vitis vinifera HOM05D004826 ORTHO05D006367 5.1e-32 141.4 130 60.0
MD11G1282600 Malus domestica HOM05D004826 ORTHO05D006367 6.6e-32 141.0 130 60.0
Thecc.01G275300 Theobroma cacao HOM05D004826 ORTHO05D006367 8.6e-32 140.6 128 61.7
Hma1.2p1_0822F.1_g224300 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 1.9e-31 139.4 126 60.3
Hma1.2p1_0822F.1_g224310 Hydrangea macrophylla HOM05D004826 ORTHO05D006367 1.9e-31 139.4 126 60.3
CiPaw.07G089800 Carya illinoinensis HOM05D004826 ORTHO05D006367 3.3e-31 138.7 130 62.3
Oeu025741.1 Olea europaea HOM05D004826 ORTHO05D006367 3.3e-31 138.7 130 61.5
Ah.02g110880 Amaranthus hybridus HOM05D004826 ORTHO05D006367 7.3e-31 137.5 101 72.3
RcHm_v2.0_Chr6g0290561 Rosa chinensis HOM05D004826 ORTHO05D006367 7.3e-31 137.5 130 59.2
CSS0030159 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 9.5e-31 137.1 130 61.5
CSS0031998 Camellia sinensis var. sinensis HOM05D004826 ORTHO05D006367 9.5e-31 137.1 130 61.5
PGR044G1874 Punica granatum HOM05D004826 ORTHO05D006367 9.5e-31 137.1 130 60.8
Rhsim01G0273300 Rhododendron simsii HOM05D004826 ORTHO05D006367 1.2e-30 136.7 130 57.7
PSO832G3843 Papaver somniferum HOM05D004826 ORTHO05D006367 1.6e-30 136.3 127 62.2
vmacro14910 Vaccinium macrocarpon HOM05D004826 ORTHO05D006367 1.6e-30 136.3 130 57.7
Haze_04685 Corylus avellana HOM05D004826 ORTHO05D006367 3.6e-30 135.2 130 60.0
HanXRQChr04g0118961 Helianthus annuus HOM05D004826 ORTHO05D006367 6.2e-30 134.4 130 58.5
AT1G03110 Arabidopsis thaliana HOM05D004826 ORTHO05D006367 1.4e-29 133.3 126 57.1
Potri.005G211600 Populus trichocarpa HOM05D004826 ORTHO05D006367 1.8e-29 132.9 125 59.2
Actinidia24908 Actinidia chinensis HOM05D004826 ORTHO05D006367 2.3e-29 132.5 130 56.9
Manes.05G079700 Manihot esculenta HOM05D004826 ORTHO05D006367 2.3e-29 132.5 130 57.7
MD03G1261900 Malus domestica HOM05D004826 ORTHO05D006367 3.1e-29 132.1 130 56.2
Lj1A48T56 Lonicera japonica HOM05D004826 ORTHO05D006367 4.0e-29 131.7 128 57.0
AL1G12580 Arabidopsis lyrata HOM05D004826 ORTHO05D006367 6.8e-29 131.0 130 56.9
Prupe.8G238200 Prunus persica HOM05D004826 ORTHO05D006367 6.8e-29 131.0 130 57.7
THA.LOC104801247 Tarenaya hassleriana HOM05D004826 ORTHO05D006367 8.9e-29 130.6 130 59.2
CARHR002460 Cardamine hirsuta HOM05D004826 ORTHO05D006367 1.2e-28 130.2 127 58.3
Cpa.g.sc2545.1 Carica papaya HOM05D004826 ORTHO05D006367 1.2e-28 130.2 128 55.5
ECA236G2315 Erigeron canadensis HOM05D004826 ORTHO05D006367 1.5e-28 129.8 130 53.8
Thhalv10007706m.g Eutrema salsugineum HOM05D004826 ORTHO05D006367 1.5e-28 129.8 130 56.2
ClCG09G007220 Citrullus lanatus HOM05D004826 ORTHO05D006367 2.0e-28 129.4 130 56.9
PSO210G5512 Papaver somniferum HOM05D004826 ORTHO05D006367 2.0e-28 129.4 126 59.5
Carub.0001s0225 Capsella rubella HOM05D004826 ORTHO05D006367 2.6e-28 129.0 130 56.2
Sabra05G0161700 Salix brachista HOM05D004826 ORTHO05D006367 2.6e-28 129.0 125 57.6
TAR633G1509 Trochodendron aralioides HOM05D004826 ORTHO05D006367 2.6e-28 129.0 127 59.1
Aa31LG1G9410 Aethionema arabicum HOM05D004826 ORTHO05D006367 3.4e-28 128.6 130 53.8
Sopen06g003480 Solanum pennellii HOM05D004826 ORTHO05D006367 3.4e-28 128.6 126 55.6
CsaV3_7G027950 Cucumis sativus L. HOM05D004826 ORTHO05D006367 4.4e-28 128.3 130 58.5
FAN20G2615 Fragaria x ananassa HOM05D004826 ORTHO05D006367 4.4e-28 128.3 130 57.7
PGSC0003DMG400005331 Solanum tuberosum HOM05D004826 ORTHO05D006367 4.4e-28 128.3 126 55.6
FvH4_2g23260 Fragaria vesca HOM05D004826 ORTHO05D006367 5.8e-28 127.9 130 57.7
FAN15G0865 Fragaria x ananassa HOM05D004826 ORTHO05D006367 5.8e-28 127.9 130 57.7
FAN27G1728 Fragaria x ananassa HOM05D004826 ORTHO05D006367 5.8e-28 127.9 130 56.9
CANSAT25G1434 Cannabis sativa HOM05D004826 ORTHO05D006367 7.5e-28 127.5 128 59.4
Aqoxy5G00445 Aquilegia oxysepala HOM05D004826 ORTHO05D006367 9.9e-28 127.1 124 59.7
Solyc06g008700.3 Solanum lycopersicum HOM05D004826 ORTHO05D006367 1.3e-27 126.7 126 55.6
C05p01720 Brassica napus HOM05D004826 ORTHO05D006367 2.9e-27 125.6 126 57.9
BolC5t28951H Brassica oleracea HOM05D004826 ORTHO05D006367 2.9e-27 125.6 126 57.9
FAN24G0969 Fragaria x ananassa HOM05D004826 ORTHO05D006367 2.9e-27 125.6 130 56.9
Eucgr.K03351 Eucalyptus grandis HOM05D004826 ORTHO05D006367 3.7e-27 125.2 130 56.9
MSTRG.18248 Avicennia marina HOM05D004826 ORTHO05D006367 4.9e-27 124.8 126 55.6
MELO3C015814.2 Cucumis melo HOM05D004826 ORTHO05D006367 4.9e-27 124.8 130 56.9
Sed0001689 Sechium edule HOM05D004826 ORTHO05D006367 4.1e-26 121.7 130 54.6
Actinidia21127 Actinidia chinensis HOM05D004826 ORTHO05D006367 7.1e-26 120.9 126 54.8
MBI05_g20783_MAGBIO Magnolia biondii HOM05D004826 ORTHO05D006367 9.2e-26 120.6 127 58.3
SalBow4G1440 Salvia bowleyana HOM05D004826 ORTHO05D006367 1.2e-25 120.2 126 54.8
Peaxi162Scf00572g00217 Petunia axillaris HOM05D004826 ORTHO05D006367 3.5e-25 118.6 126 52.4
Psat3g063080 Pisum sativum HOM05D004826 ORTHO05D006367 6.0e-25 117.9 130 55.4
arahy.Tifrunner.gnm1.ann1.HM2HLZ Arachis hypogaea HOM05D004826 ORTHO05D006367 7.8e-25 117.5 130 54.6
Cc01_g19270 Coffea canephora HOM05D004826 ORTHO05D006367 1.3e-24 116.7 132 53.8
arahy.Tifrunner.gnm1.ann1.ZSCD81 Arachis hypogaea HOM05D004826 ORTHO05D006367 1.7e-24 116.3 130 53.8
Lalb_Chr01g0020091 Lupinus albus HOM05D004826 ORTHO05D006367 2.3e-24 115.9 130 53.1
Lj1g0007005 Lotus japonicus HOM05D004826 ORTHO05D006367 3.0e-24 115.5 128 53.1
Sp1g02120 Schrenkiella parvula HOM05D004826 ORTHO05D006367 3.9e-24 115.2 126 53.2
BcaC07g42266 Brassica carinata HOM05D004826 ORTHO05D002453 5.1e-24 114.8 126 53.2
BolC8t52808H Brassica oleracea HOM05D004826 ORTHO05D002453 5.1e-24 114.8 126 53.2
Glyma.19G158200 Glycine max HOM05D004826 ORTHO05D006367 5.1e-24 114.8 128 53.1
BraA09t42171Z Brassica rapa HOM05D004826 ORTHO05D002453 8.6e-24 114.0 126 54.8
Glyma.03G155900 Glycine max HOM05D004826 ORTHO05D006367 1.1e-23 113.6 128 53.9
A09p68350 Brassica napus HOM05D004826 ORTHO05D002453 1.9e-23 112.8 126 54.0
TPR.G24327 Trifolium pratense HOM05D004826 ORTHO05D006367 2.5e-23 112.5 130 52.3
Ca_08614_v3 Cicer arietinum L. HOM05D004826 ORTHO05D006367 3.3e-23 112.1 130 52.3
C08p52920 Brassica napus HOM05D004826 ORTHO05D002453 7.3e-23 110.9 126 51.6
DCAR_002720 Daucus carota HOM05D004826 ORTHO05D006367 7.3e-23 110.9 125 52.8
Phvul.001G153300 Phaseolus vulgaris HOM05D004826 ORTHO05D006367 7.3e-23 110.9 128 51.6
C08p00410 Brassica napus HOM05D004826 ORTHO05D006367 1.2e-22 110.2 130 51.5
BolC8t46840H Brassica oleracea HOM05D004826 ORTHO05D006367 1.2e-22 110.2 130 51.5
A08p37480 Brassica napus HOM05D004826 ORTHO05D006367 6.2e-22 107.8 130 50.8
BraA08t35646Z Brassica rapa HOM05D004826 ORTHO05D006367 6.2e-22 107.8 130 50.8
VMungo1383G1287 Vigna mungo HOM05D004826 ORTHO05D006367 1.4e-21 106.7 128 50.8
Medtr7g095190 Medicago truncatula HOM05D004826 ORTHO05D006367 3.1e-21 105.5 130 50.0
A10p01740 Brassica napus HOM05D004826 ORTHO05D006367 6.8e-21 104.4 111 55.9
Migut.D00320 Erythranthe guttata HOM05D004826 ORTHO05D006367 6.8e-21 104.4 131 50.4
CDE06G0967 Ceratophyllum demersum HOM05D004826 ORTHO05D006367 8.9e-21 104.0 123 54.5
SGA_v2.0_scaffold1G00502 Striga asiatica HOM05D004826 ORTHO05D006367 8.4e-19 97.4 126 50.0
Os03g0746800 Oryza sativa ssp. japonica HOM05D004826 ORTHO05D006367 1.2e-17 93.6 125 46.4
Zm00001eb215000 Zea mays HOM05D004826 ORTHO05D006367 2.1e-17 92.8 128 44.5
BraA10t42449Z Brassica rapa HOM05D004826 ORTHO05D006367 1.1e-15 87.0 96 54.2
Lsat_1_v5_gn_8_56761 Lactuca sativa HOM05D004826 ORTHO05D006367 1.9e-15 86.3 85 54.1
SHI16388 Sapria himalayana HOM05D004826 ORTHO05D006367 1.8e-13 79.7 137 45.3
Nitab4.5_0025955g0010 Nicotiana tabacum HOM05D004826 ORTHO05D006367 3.1e-13 79.0 77 58.4
Ca_08622_v3 Cicer arietinum L. HOM05D004826 ORTHO05D006367 6.9e-13 77.8 111 43.2
QL12p021035 Quercus lobata HOM05D004826 ORTHO05D006367 4.4e-12 75.1 84 53.6
SEGI_35891 Sequoiadendron giganteum HOM05D004826 ORTHO05D006367 2.2e-11 72.8 137 40.9
CDE07G1977 Ceratophyllum demersum HOM05D003852 ORTHO05D003095 2.4e-10 69.3 64 62.5
HPP92_006117 Vanilla planifolia HOM05D004826 ORTHO05D006367 2.4e-10 69.3 122 37.7
BcaNung01308 Brassica carinata HOM05D004826 ORTHO05D006367 1.2e-09 67.0 86 45.3
BcaNung01310 Brassica carinata HOM05D004826 ORTHO05D006367 1.2e-09 67.0 86 45.3
C01p00020 Brassica napus HOM05D004826 ORTHO05D006367 1.2e-09 67.0 86 45.3
C01p00040 Brassica napus HOM05D004826 ORTHO05D006367 1.2e-09 67.0 86 45.3
BolC1t00008H Brassica oleracea HOM05D004826 ORTHO05D006367 1.2e-09 67.0 86 45.3
Oeu040654.1 Olea europaea HOM05D004826 ORTHO05D006367 2.1e-09 66.2 96 45.8
SMO358G0471 Selaginella moellendorffii HOM05D004826 ORTHO05D006367 3.5e-09 65.5 144 38.2
AUR62018484 Chenopodium quinoa HOM05D000094 ORTHO05D002388 7.8e-09 64.3 107 45.8
SGA_v2.0_scaffold138G35320 Striga asiatica HOM05D004826 ORTHO05D006367 6.6e-08 61.2 107 38.3
BraA09t42133Z Brassica rapa HOM05D004826 ORTHO05D006367 7.3e-07 57.8 83 47.0
Lj1C48G4 Lonicera japonica HOM05D000001 ORTHO05D000003 9.6e-07 57.4 51 52.9
A09p67980 Brassica napus HOM05D004826 ORTHO05D006367 1.6e-06 56.6 83 45.8
Pp3c3_10370 Physcomitrium patens HOM05D004826 ORTHO05D006367 8.1e-06 54.3 129 34.1


User provided reference genes

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