Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 3020.3 1656 100.0
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1805.8 1758 63.4
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1796.6 1714 64.2
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1502.3 1756 55.8
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1463.4 1650 56.0
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1449.9 1732 54.4
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1409.8 1734 54.1
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1401.0 1722 54.4
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1386.3 1744 53.6
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1384.8 1756 53.0
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1382.5 1726 53.9
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1378.2 1723 54.3
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1364.4 1739 53.0
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1355.1 1709 52.5
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1350.9 1748 51.6
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1343.2 1725 53.0
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1322.0 1689 53.3
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1311.2 1758 51.6
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1305.8 1715 52.2
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1305.8 1719 50.8
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1304.3 1735 51.7
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1303.9 1822 50.2
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1300.8 1359 60.0
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1286.2 1744 50.2
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1285.8 1765 50.3
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1285.0 1686 51.2
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1283.1 1741 50.3
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1280.8 1733 50.6
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1278.1 1742 50.3
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1276.2 1727 50.9
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1275.4 1731 51.4
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1274.2 1699 50.7
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1273.8 1730 50.6
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1271.5 1717 50.7
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1270.4 1735 51.2
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1268.1 1736 50.2
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1264.6 1436 57.1
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1262.3 1725 51.9
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1257.7 1729 50.1
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1256.9 1801 49.8
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1255.7 1720 50.2
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1254.6 1705 50.6
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1251.1 1734 50.0
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1250.0 1737 49.5
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1249.6 1736 49.9
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1248.8 1738 49.5
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 0.0e+00 1246.9 1438 57.4
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1246.5 1736 49.8
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1242.6 1708 50.9
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1239.2 1711 50.3
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1234.9 1727 49.7
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1229.5 1700 47.6
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1225.7 1929 46.3
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1218.8 1688 49.1
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1216.4 1807 48.8
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1211.4 1524 53.8
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1201.4 1446 55.5
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1196.8 1665 48.9
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1191.4 1692 49.8
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1187.9 1710 48.2
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 1174.1 1714 48.7
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1165.6 1190 61.6
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1162.1 1620 50.4
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1154.8 1658 48.8
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1144.8 1482 51.1
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1122.1 1735 46.3
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1112.4 1217 59.8
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1094.3 1221 56.8
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1091.6 1227 57.5
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1085.9 1420 51.8
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1080.9 1493 51.1
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 3.2e-304 1049.3 1300 55.2
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 4.7e-300 1035.4 955 64.2
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 3.1e-299 1032.7 1203 56.1
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 9.6e-277 958.0 1502 46.5
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 7.6e-274 948.3 1711 41.7
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 9.9e-274 948.0 1261 51.5
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.7e-270 937.2 954 59.7
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 4.2e-264 916.0 1005 59.7
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 2.1e-263 913.7 825 64.4
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 2.4e-235 820.5 1103 49.3
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 5.7e-229 799.3 1393 43.3
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 1.0e-222 778.5 1250 45.7
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 1.4e-163 582.0 1066 44.5
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 1.7e-161 575.1 884 43.1
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 2.5e-144 518.1 557 58.0
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 3.0e-121 441.4 1142 34.1
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 5.3e-118 430.6 876 40.4
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 7.0e-110 403.7 750 41.6
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.0e-89 336.7 736 38.0
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 2.3e-84 318.9 260 68.8
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.9e-79 301.2 705 35.2
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 6.2e-58 231.1 227 58.1
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 6.8e-57 227.6 737 33.4
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 5.6e-51 208.0 489 36.6
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 1.4e-49 203.4 214 57.9
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 5.1e-44 184.9 231 48.1
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.6e-37 163.3 175 53.7
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 3.9e-36 158.7 178 54.5
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 5.1e-36 158.3 244 42.6
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-35 156.8 166 59.0
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.6e-34 153.3 1304 22.8
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-27 130.2 152 56.6
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 1.5e-27 130.2 93 65.6
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.6e-27 127.5 273 36.6
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 2.9e-23 115.9 222 33.8
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-22 113.2 107 56.1
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 5.5e-22 111.7 116 55.2
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.9e-19 103.2 114 53.5
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 2.8e-18 99.4 275 26.9
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 5.0e-15 88.6 61 59.0
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 2.5e-14 86.3 82 56.1
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 3.2e-14 85.9 83 56.6
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 6.7e-12 78.2 156 37.2
Migut.C00071 Erythranthe guttata HOM05D001674 ORTHO05D008599 1.7e-07 63.5 145 40.0


User provided reference genes

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