Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund01450 Selenicereus undatus HOM05D004789 ORTHO05D006078 7.9e-106 387.1 194 100.0
Hund01346 Selenicereus undatus HOM05D004789 ORTHO05D006078 2.8e-71 272.3 173 80.9
Hund07352 Selenicereus undatus HOM05D004789 ORTHO05D006078 2.7e-45 186.0 110 81.8
Hund24180 Selenicereus undatus HOM05D004789 ORTHO05D006078 1.0e-41 174.1 162 60.5
EL10Ac4g09992 Beta vulgaris HOM05D004789 ORTHO05D006078 1.2e-40 170.6 110 70.9
Hund01197 Selenicereus undatus HOM05D004789 ORTHO05D006078 2.0e-40 169.9 162 59.3
AUR62000303 Chenopodium quinoa HOM05D004789 ORTHO05D006078 4.9e-39 165.2 107 72.0
AUR62006648 Chenopodium quinoa HOM05D004789 ORTHO05D006078 1.1e-38 164.1 106 72.6
Sc16g0010430 Simmondsia chinensis HOM05D004789 ORTHO05D006078 1.9e-38 163.3 110 70.0
CANSAT54G2477 Cannabis sativa HOM05D004789 ORTHO05D006078 2.4e-38 162.9 144 55.6
Glyma.09G249800 Glycine max HOM05D004789 ORTHO05D006078 5.4e-38 161.8 144 55.6
Hund21904 Selenicereus undatus HOM05D004789 ORTHO05D006078 5.4e-38 161.8 110 68.2
Duzib106G1853 Durio zibethinus HOM05D004789 ORTHO05D006078 1.2e-37 160.6 144 55.6
Ah.06g195430 Amaranthus hybridus HOM05D004789 ORTHO05D006078 2.0e-37 159.8 110 66.4
Medtr7g080117 Medicago truncatula HOM05D004789 ORTHO05D006078 2.0e-37 159.8 110 68.2
Thecc.05G194100 Theobroma cacao HOM05D004789 ORTHO05D006078 2.0e-37 159.8 140 56.4
C03p71470 Brassica napus HOM05D004789 ORTHO05D006078 2.7e-37 159.5 144 54.9
BolC3t19438H Brassica oleracea HOM05D004789 ORTHO05D006078 2.7e-37 159.5 144 54.9
TAR626G0377 Trochodendron aralioides HOM05D004789 ORTHO05D006078 2.7e-37 159.5 144 54.9
MD04G1245400 Malus domestica HOM05D004789 ORTHO05D006078 4.6e-37 158.7 144 54.2
Lalb_Chr03g0038671 Lupinus albus HOM05D004789 ORTHO05D006078 6.0e-37 158.3 144 54.9
MD13G1061000 Malus domestica HOM05D004789 ORTHO05D006078 6.0e-37 158.3 144 54.2
Nn1g09737 Nelumbo nucifera HOM05D004789 ORTHO05D006078 6.0e-37 158.3 110 66.4
TPR.G10693 Trifolium pratense HOM05D004789 ORTHO05D006078 6.0e-37 158.3 110 67.3
Ca_07992_v3 Cicer arietinum L. HOM05D004789 ORTHO05D006078 7.8e-37 157.9 110 66.4
BcaB01g00932 Brassica carinata HOM05D004789 ORTHO05D006078 1.0e-36 157.5 144 54.9
FvH4_6g00440 Fragaria vesca HOM05D004789 ORTHO05D006078 1.0e-36 157.5 140 54.3
FAN09G1869 Fragaria x ananassa HOM05D004789 ORTHO05D006078 1.0e-36 157.5 140 54.3
PGR119G2005 Punica granatum HOM05D004789 ORTHO05D006078 1.3e-36 157.1 144 54.9
vmacro19979 Vaccinium macrocarpon HOM05D004789 ORTHO05D006078 1.3e-36 157.1 158 50.6
DCAR_020684 Daucus carota HOM05D004789 ORTHO05D006078 1.7e-36 156.8 110 67.3
CAN.G1807.2 Capsicum annuum HOM05D004789 ORTHO05D006078 2.3e-36 156.4 145 55.9
Gorai.004G263000 Gossypium raimondii HOM05D004789 ORTHO05D006078 2.3e-36 156.4 144 53.5
Hma1.2p1_0609F.1_g188420 Hydrangea macrophylla HOM05D004789 ORTHO05D006078 2.3e-36 156.4 144 54.9
Hma1.2p1_0609F.1_g188430 Hydrangea macrophylla HOM05D004789 ORTHO05D006078 2.3e-36 156.4 144 54.9
HanXRQChr17g0538711 Helianthus annuus HOM05D004789 ORTHO05D006078 3.0e-36 156.0 163 50.9
Lsat_1_v5_gn_3_24661 Lactuca sativa HOM05D004789 ORTHO05D006078 3.0e-36 156.0 163 50.9
Psat3g102920 Pisum sativum HOM05D004789 ORTHO05D006078 3.0e-36 156.0 110 65.5
PGR083G2717 Punica granatum HOM05D004789 ORTHO05D006078 3.0e-36 156.0 143 55.2
PGR092G0005 Punica granatum HOM05D004789 ORTHO05D006078 3.0e-36 156.0 143 55.2
BcaC01g01832 Brassica carinata HOM05D004789 ORTHO05D006078 3.9e-36 155.6 144 54.9
A06p20290 Brassica napus HOM05D004789 ORTHO05D006078 3.9e-36 155.6 144 54.9
BraA06t25110Z Brassica rapa HOM05D004789 ORTHO05D006078 3.9e-36 155.6 144 54.9
Haze_04568 Corylus avellana HOM05D004789 ORTHO05D006078 3.9e-36 155.6 109 67.0
Gohir.A08G226100 Gossypium hirsutum HOM05D004789 ORTHO05D006078 3.9e-36 155.6 144 53.5
Gohir.D08G246500 Gossypium hirsutum HOM05D004789 ORTHO05D006078 3.9e-36 155.6 144 53.5
RcHm_v2.0_Chr3g0447811 Rosa chinensis HOM05D004789 ORTHO05D006078 3.9e-36 155.6 140 53.6
Eucgr.C00113 Eucalyptus grandis HOM05D004789 ORTHO05D006078 5.0e-36 155.2 144 53.5
Thhalv10010225m.g Eutrema salsugineum HOM05D004789 ORTHO05D006078 5.0e-36 155.2 144 54.9
MBI11_g05799_MAGBIO Magnolia biondii HOM05D004789 ORTHO05D006078 5.0e-36 155.2 144 54.9
QL01p049601 Quercus lobata HOM05D004789 ORTHO05D006078 5.0e-36 155.2 144 53.5
THA.LOC104801872 Tarenaya hassleriana HOM05D004789 ORTHO05D006078 5.0e-36 155.2 111 65.8
VMungo1383G0580 Vigna mungo HOM05D004789 ORTHO05D006078 5.0e-36 155.2 110 66.4
Aa31sc348G30 Aethionema arabicum HOM05D004789 ORTHO05D006078 6.6e-36 154.8 106 67.9
AT3G47390 Arabidopsis thaliana HOM05D004789 ORTHO05D006078 6.6e-36 154.8 144 54.9
MELO3C010048.2 Cucumis melo HOM05D004789 ORTHO05D006078 6.6e-36 154.8 164 49.4
GSVIVG01019077001 Vitis vinifera HOM05D004789 ORTHO05D006078 6.6e-36 154.8 146 52.7
CiPaw.07G081200 Carya illinoinensis HOM05D004789 ORTHO05D006078 8.6e-36 154.5 144 54.2
COL.COLO4_38035 Corchorus olitorius HOM05D004789 ORTHO05D006078 8.6e-36 154.5 140 54.3
Glyma.18G242600 Glycine max HOM05D004789 ORTHO05D006078 8.6e-36 154.5 110 66.4
Lj1g0000623 Lotus japonicus HOM05D004789 ORTHO05D006078 8.6e-36 154.5 110 66.4
Sp5g14500 Schrenkiella parvula HOM05D004789 ORTHO05D006078 8.6e-36 154.5 144 54.2
Aa31csc271G10 Aethionema arabicum HOM05D004789 ORTHO05D006078 1.1e-35 154.1 110 65.5
ATR0661G474 Amborella trichopoda HOM05D004789 ORTHO05D006078 1.1e-35 154.1 158 52.5
arahy.Tifrunner.gnm1.ann1.537LAH Arachis hypogaea HOM05D004789 ORTHO05D006078 1.1e-35 154.1 110 65.5
arahy.Tifrunner.gnm1.ann1.66TKXZ Arachis hypogaea HOM05D004789 ORTHO05D006078 1.1e-35 154.1 110 65.5
Phvul.008G053900 Phaseolus vulgaris HOM05D004789 ORTHO05D006078 1.1e-35 154.1 110 65.5
CSS0025571 Camellia sinensis var. sinensis HOM05D004789 ORTHO05D006078 1.5e-35 153.7 144 52.8
CSS0046891 Camellia sinensis var. sinensis HOM05D004789 ORTHO05D006078 1.5e-35 153.7 144 52.8
Peaxi162Scf00048g00311 Petunia axillaris HOM05D004789 ORTHO05D006078 1.5e-35 153.7 145 55.2
Potri.019G054000 Populus trichocarpa HOM05D004789 ORTHO05D006078 1.5e-35 153.7 144 53.5
TWI36G0056 Tripterygium wilfordii HOM05D004789 ORTHO05D006078 1.5e-35 153.7 144 53.5
CARHR156030 Cardamine hirsuta HOM05D004789 ORTHO05D006078 1.9e-35 153.3 144 54.9
CDE05G3244 Ceratophyllum demersum HOM05D004789 ORTHO05D006078 1.9e-35 153.3 144 53.5
Manes.12G005100 Manihot esculenta HOM05D004789 ORTHO05D006078 1.9e-35 153.3 144 53.5
Aqoxy2G01476 Aquilegia oxysepala HOM05D004789 ORTHO05D006078 2.5e-35 152.9 110 65.5
HanXRQChr06g0173981 Helianthus annuus HOM05D004789 ORTHO05D006078 2.5e-35 152.9 163 49.7
Oeu009739.1 Olea europaea HOM05D004789 ORTHO05D006078 2.5e-35 152.9 145 53.1
Nitab4.5_0000083g0070 Nicotiana tabacum HOM05D004789 ORTHO05D006078 3.3e-35 152.5 145 55.2
Nitab4.5_0001435g0010 Nicotiana tabacum HOM05D004789 ORTHO05D006078 3.3e-35 152.5 145 55.2
Actinidia06832 Actinidia chinensis HOM05D004789 ORTHO05D006078 4.3e-35 152.1 110 62.7
AL5G26580 Arabidopsis lyrata HOM05D004789 ORTHO05D006078 4.3e-35 152.1 144 53.5
PSO017G6674 Papaver somniferum HOM05D004789 ORTHO05D006078 5.6e-35 151.8 110 65.5
Prupe.6G362000 Prunus persica HOM05D004789 ORTHO05D006078 5.6e-35 151.8 144 51.4
Cpa.g.sc2508.1 Carica papaya HOM05D004789 ORTHO05D006078 7.3e-35 151.4 109 65.1
ClCG03G010600 Citrullus lanatus HOM05D004789 ORTHO05D006078 7.3e-35 151.4 171 47.4
Dinv29093 Davidia involucrata HOM05D004789 ORTHO05D006078 7.3e-35 151.4 144 52.1
PSO675G5907 Papaver somniferum HOM05D004789 ORTHO05D006078 7.3e-35 151.4 110 64.5
Sabra19G0063100 Salix brachista HOM05D004789 ORTHO05D006078 7.3e-35 151.4 144 52.8
Rhsim05G0170800 Rhododendron simsii HOM05D004789 ORTHO05D006078 9.5e-35 151.0 140 52.1
HanXRQChr06g0174041 Helianthus annuus HOM05D004789 ORTHO05D006078 1.2e-34 150.6 164 50.0
Sed0025011 Sechium edule HOM05D004789 ORTHO05D006078 1.6e-34 150.2 167 47.3
Carub.0005s1348 Capsella rubella HOM05D004789 ORTHO05D006078 2.1e-34 149.8 144 52.1
Cc09_g03720 Coffea canephora HOM05D004789 ORTHO05D006078 2.1e-34 149.8 145 52.4
Sed0000944 Sechium edule HOM05D004789 ORTHO05D006078 2.1e-34 149.8 140 52.1
Sopen04g025480 Solanum pennellii HOM05D004789 ORTHO05D006078 2.1e-34 149.8 145 53.1
PGSC0003DMG400010518 Solanum tuberosum HOM05D004789 ORTHO05D006078 2.1e-34 149.8 145 53.1
Aa31sc60G10 Aethionema arabicum HOM05D004789 ORTHO05D006078 3.6e-34 149.1 144 52.1
Solyc04g056540.3 Solanum lycopersicum HOM05D004789 ORTHO05D006078 3.6e-34 149.1 145 53.1
SGA_v2.0_scaffold14G07118 Striga asiatica HOM05D004789 ORTHO05D006078 3.6e-34 149.1 145 53.1
MELO3C010050.2 Cucumis melo HOM05D004789 ORTHO05D006078 4.7e-34 148.7 160 48.1
CsaV3_1G044470 Cucumis sativus L. HOM05D004789 ORTHO05D006078 6.2e-34 148.3 171 46.2
SalBow1G3031 Salvia bowleyana HOM05D004789 ORTHO05D006078 6.2e-34 148.3 110 60.9
Migut.F02116 Erythranthe guttata HOM05D004789 ORTHO05D006078 1.4e-33 147.1 110 60.0
SGA_v2.0_scaffold11G05812 Striga asiatica HOM05D004789 ORTHO05D006078 1.4e-33 147.1 145 51.7
Os02g0473000 Oryza sativa ssp. japonica HOM05D004789 ORTHO05D006078 4.0e-33 145.6 158 48.7
Lsat_1_v5_gn_8_109000 Lactuca sativa HOM05D004789 ORTHO05D006078 5.2e-33 145.2 159 47.8
unitig_0.g1013 Utricularia gibba HOM05D004789 ORTHO05D006078 6.8e-33 144.8 108 60.2
Ciclev10011346m.g Citrus clementina HOM05D004789 ORTHO05D006078 1.5e-32 143.7 144 49.3
Lsat_1_v5_gn_7_32541 Lactuca sativa HOM05D004789 ORTHO05D006078 1.3e-31 140.6 105 62.9
HPP92_008120 Vanilla planifolia HOM05D004789 ORTHO05D006078 1.3e-31 140.6 144 49.3
Atru.BG.270.p Acer truncatum HOM05D004789 ORTHO05D006078 1.7e-31 140.2 144 52.1
Zm00001eb240960 Zea mays HOM05D004789 ORTHO05D006078 1.7e-31 140.2 158 46.8
Lj2C731T11 Lonicera japonica HOM05D004789 ORTHO05D006078 9.2e-30 134.4 122 55.7
Hund12586 Selenicereus undatus HOM05D004789 ORTHO05D006078 1.2e-29 134.0 147 54.4
SMO141G0244 Selaginella moellendorffii HOM05D004789 ORTHO05D006078 6.0e-29 131.7 111 52.3
SHI13715 Sapria himalayana HOM05D004789 ORTHO05D006078 7.8e-29 131.3 146 46.6
AagrBONN_evm.TU.Sc2ySwM_117.447 Anthoceros agrestis HOM05D004789 ORTHO05D006078 3.0e-28 129.4 111 53.2
Pp3c21_670 Physcomitrium patens HOM05D004789 ORTHO05D006078 1.5e-27 127.1 111 54.1
SEGI_33759 Sequoiadendron giganteum HOM05D004789 ORTHO05D006078 3.3e-27 125.9 109 55.0
Mapoly0151s0033 Marchantia polymorpha HOM05D004789 ORTHO05D006078 5.6e-27 125.2 111 51.4
SEGI_29409 Sequoiadendron giganteum HOM05D004789 ORTHO05D006078 5.6e-27 125.2 112 58.0
Pp3c9_9570 Physcomitrium patens HOM05D004789 ORTHO05D006078 2.1e-26 123.2 107 53.3
Pp3c19_9150 Physcomitrium patens HOM05D004789 ORTHO05D006078 4.7e-26 122.1 111 51.4
CBR_g21226 Chara braunii HOM05D004789 ORTHO05D006078 6.2e-26 121.7 110 50.0
Pp3c15_7710 Physcomitrium patens HOM05D004789 ORTHO05D006078 1.1e-25 120.9 111 49.5
Cre17.g728950 Chlamydomonas reinhardtii HOM05D004789 ORTHO05D006078 3.1e-25 119.4 111 50.5
PRCOL_00003473 Prasinoderma coloniale HOM05D004789 ORTHO05D006078 9.2e-22 107.8 145 42.1
SMO145G0191 Selaginella moellendorffii HOM05D004789 ORTHO05D006078 2.7e-21 106.3 89 51.7
MCO11G683 Micromonas commoda HOM05D004789 ORTHO05D006078 4.9e-15 85.5 111 39.6
SEGI_24407 Sequoiadendron giganteum HOM05D004789 ORTHO05D006078 6.4e-15 85.1 99 42.4
ATR0804G049 Amborella trichopoda HOM05D004789 ORTHO05D006078 4.6e-13 79.0 48 75.0
Sopen01g029920 Solanum pennellii HOM05D004789 ORTHO05D393610 1.2e-08 64.3 39 79.5
Ah.01g017460 Amaranthus hybridus HOM05D004789 ORTHO05D006078 5.8e-08 62.0 56 55.4
Hund01211 Selenicereus undatus HOM05D004789 ORTHO05D382338 1.4e-06 57.4 31 83.9


User provided reference genes

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