Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00844 Selenicereus undatus HOM05D008455 ORTHO05D009597 2.9e-264 914.8 511 100.0
Hund08561 Selenicereus undatus HOM05D008455 ORTHO05D009597 8.6e-136 488.0 419 66.3
Hund01459 Selenicereus undatus HOM05D008455 ORTHO05D009597 7.4e-111 405.2 380 60.3
Hund15433 Selenicereus undatus HOM05D008455 ORTHO05D009597 2.5e-95 353.6 230 78.3
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 4.1e-77 293.1 503 38.2
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 1.2e-76 291.6 503 38.6
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 9.4e-74 282.0 525 37.1
EL10Ac9g22691 Beta vulgaris HOM05D008455 ORTHO05D009597 1.6e-73 281.2 503 37.6
EL10Ac3g06519 Beta vulgaris HOM05D008455 ORTHO05D009597 2.3e-64 250.8 429 37.8
EL10Ac6g14371 Beta vulgaris HOM05D008455 ORTHO05D009597 3.4e-63 246.9 476 37.2
EL10Ac2g03454 Beta vulgaris HOM05D008455 ORTHO05D009597 1.4e-61 241.5 229 53.3
Ah.06g194520 Amaranthus hybridus HOM05D000711 ORTHO05D000545 1.8e-61 241.1 264 48.5
EL10Ac3g06257 Beta vulgaris HOM05D008455 ORTHO05D009597 6.5e-59 232.6 236 52.1
EL10Ac3g06529 Beta vulgaris HOM05D008455 ORTHO05D009597 2.6e-55 220.7 209 53.6
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.7e-54 216.9 356 43.3
EL10As3g23351 Beta vulgaris HOM05D008455 ORTHO05D009597 5.9e-52 209.5 297 49.5
Hund04004 Selenicereus undatus HOM05D008455 ORTHO05D009597 1.5e-50 204.9 204 59.3
AUR62037081 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.3e-50 203.8 316 38.6
AUR62039309 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.2e-49 201.8 311 38.9
Hund08237 Selenicereus undatus HOM05D008455 ORTHO05D009597 2.8e-49 200.7 160 68.8
Hund24009 Selenicereus undatus HOM05D008455 ORTHO05D009597 4.9e-46 189.9 310 53.9
Ah.01g006000 Amaranthus hybridus HOM05D008455 ORTHO05D009597 2.4e-45 187.6 420 34.8
AUR62037945 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.6e-41 174.9 276 37.0
AUR62037410 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.1e-40 170.6 243 38.7
AUR62039826 Chenopodium quinoa HOM05D008455 ORTHO05D009597 6.8e-40 169.5 209 44.5
AUR62033711 Chenopodium quinoa HOM05D008455 ORTHO05D009597 9.8e-39 165.6 290 36.6
AUR62037959 Chenopodium quinoa HOM05D000107 ORTHO05D009597 2.2e-38 164.5 312 34.3
EL10Ac6g13954 Beta vulgaris HOM05D008455 ORTHO05D009597 2.1e-36 157.9 143 57.3
AUR62034408 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.3e-35 154.5 156 48.7
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 2.3e-32 144.4 250 35.6
Nitab4.5_0000111g0060 Nicotiana tabacum HOM05D008455 ORTHO05D009597 2.3e-32 144.4 161 45.3
AUR62041956 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.4e-31 140.2 162 43.8
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.4e-29 135.2 235 35.3
Nitab4.5_0001261g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 4.6e-28 130.2 163 41.7
Manes.12G086248 Manihot esculenta HOM05D009290 ORTHO05D009597 3.3e-26 124.0 220 34.5
Nitab4.5_0010535g0040 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.3e-26 124.0 220 37.3
AUR62037441 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.3e-26 123.6 141 44.0
Nitab4.5_0007164g0020 Nicotiana tabacum HOM05D009290 ORTHO05D009597 6.2e-25 119.8 237 33.8
Nitab4.5_0014285g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.1e-24 119.0 132 44.7
EL10Ac7g17382 Beta vulgaris HOM05D008455 ORTHO05D009597 1.7e-22 111.7 108 52.8
Nitab4.5_0005770g0030 Nicotiana tabacum HOM05D009290 ORTHO05D009597 6.4e-22 109.8 158 37.3
Nitab4.5_0017029g0010 Nicotiana tabacum HOM05D008455 ORTHO05D009597 3.2e-21 107.5 129 45.0
Hund20015 Selenicereus undatus HOM05D008455 ORTHO05D009597 7.8e-20 102.8 360 39.2
Manes.08G028050 Manihot esculenta HOM05D009290 ORTHO05D009597 2.3e-19 101.3 192 34.4
AUR62041499 Chenopodium quinoa HOM05D008455 ORTHO05D009597 5.2e-16 90.1 87 49.4
AUR62039352 Chenopodium quinoa HOM05D008455 ORTHO05D009597 9.9e-15 85.9 88 50.0
Hund22505 Selenicereus undatus HOM05D008455 ORTHO05D009597 9.9e-15 85.9 210 34.3
Nitab4.5_0002907g0070 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.8e-14 84.0 182 31.3
EL10Ac6g14559 Beta vulgaris HOM05D008595 ORTHO05D010945 4.9e-14 83.6 452 24.6
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.9e-13 81.6 246 30.1
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.4e-13 80.1 161 32.3
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 9.3e-13 79.3 224 28.1
EL10Ac1g01792 Beta vulgaris HOM05D008595 ORTHO05D010945 2.7e-12 77.8 512 24.4
Manes.11G024650 Manihot esculenta HOM05D008455 ORTHO05D009597 3.5e-12 77.4 87 49.4
Manes.17G118642 Manihot esculenta HOM05D008455 ORTHO05D009597 3.5e-12 77.4 87 49.4
Manes.17G119328 Manihot esculenta HOM05D008455 ORTHO05D009597 3.5e-12 77.4 87 49.4
EL10Ac5g11175 Beta vulgaris HOM05D008595 ORTHO05D010945 4.6e-12 77.0 534 24.3
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 4.6e-12 77.0 175 30.3
AUR62039170 Chenopodium quinoa HOM05D008455 ORTHO05D009597 7.8e-12 76.3 89 49.4
EL10Ac2g03126 Beta vulgaris HOM05D008595 ORTHO05D010945 1.0e-11 75.9 483 22.4
Atru.chr1.767 Acer truncatum HOM05D001309 ORTHO05D000385 1.3e-11 75.5 220 27.7
EL10Ac4g08588 Beta vulgaris HOM05D008595 ORTHO05D010945 1.3e-11 75.5 470 23.2
AUR62032009 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.3e-11 75.5 117 39.3
Hund08236 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.7e-11 75.1 48 66.7
EL10Ac5g11817 Beta vulgaris HOM05D008595 ORTHO05D010945 3.0e-11 74.3 421 26.1
EL10Ac7g16685 Beta vulgaris HOM05D008595 ORTHO05D010945 5.1e-11 73.6 504 24.6
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.1e-11 73.6 205 26.8
EL10Ac3g06761 Beta vulgaris HOM05D008595 ORTHO05D010945 6.6e-11 73.2 504 24.2
EL10Ac3g06763 Beta vulgaris HOM05D008595 ORTHO05D010945 6.6e-11 73.2 504 24.2
TAR375G1128 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.6e-11 73.2 232 26.3
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 2.5e-10 71.2 235 26.8
Nn2g11546 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.5e-10 71.2 244 24.6
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.5e-10 71.2 171 31.0
EL10Ac6g14177 Beta vulgaris HOM05D008595 ORTHO05D010945 3.3e-10 70.9 416 24.0
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 3.3e-10 70.9 262 26.7
EL10Ac1g02242 Beta vulgaris HOM05D008595 ORTHO05D010945 4.3e-10 70.5 242 25.2
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.6e-10 70.1 224 22.3
Hund04271 Selenicereus undatus HOM05D008455 ORTHO05D009597 5.6e-10 70.1 126 65.1
TAR633G2694 Trochodendron aralioides HOM05D001309 ORTHO05D000385 5.6e-10 70.1 212 25.9
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.3e-10 69.7 224 22.3
Manes.15G180436 Manihot esculenta HOM05D009290 ORTHO05D009597 7.3e-10 69.7 129 32.6
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 9.6e-10 69.3 235 26.4
TAR633G1156 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.6e-10 69.3 235 25.1
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-09 68.9 147 30.6
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.6e-09 68.6 158 28.5
AT3G30200 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 1.6e-09 68.6 157 23.6
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 2.1e-09 68.2 157 24.2
EL10Ac5g11465 Beta vulgaris HOM05D008595 ORTHO05D010945 2.8e-09 67.8 247 25.5
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 2.8e-09 67.8 185 29.2
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.8e-09 67.8 235 24.7
EL10Ac5g11348 Beta vulgaris HOM05D008595 ORTHO05D010945 3.6e-09 67.4 270 24.1
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 3.6e-09 67.4 489 23.7
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 3.6e-09 67.4 260 25.0
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 3.6e-09 67.4 235 26.0
Manes.16G080850 Manihot esculenta HOM05D009290 ORTHO05D009597 3.6e-09 67.4 144 29.9
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 3.6e-09 67.4 161 27.3
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 4.8e-09 67.0 260 25.0
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 4.8e-09 67.0 233 27.5
TAR365G0008 Trochodendron aralioides HOM05D001163 ORTHO05D001769 4.8e-09 67.0 161 27.3
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 6.2e-09 66.6 268 26.9
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 8.1e-09 66.2 261 24.5
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.1e-09 66.2 161 27.3
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.1e-09 66.2 161 27.3
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 1.4e-08 65.5 141 31.2
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 1.8e-08 65.1 218 25.7
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.8e-08 65.1 228 29.4
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.8e-08 65.1 176 27.8
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 2.4e-08 64.7 274 25.2
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 3.1e-08 64.3 244 23.4
EL10Ac9g20868 Beta vulgaris HOM05D008595 ORTHO05D010945 4.0e-08 63.9 484 21.3
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 4.0e-08 63.9 233 26.2
TAR633G0853 Trochodendron aralioides HOM05D001163 ORTHO05D001769 4.0e-08 63.9 131 29.8
EL10Ac3g06466 Beta vulgaris HOM05D008595 ORTHO05D010945 6.9e-08 63.2 466 23.2
EL10Ac5g11379 Beta vulgaris HOM05D008595 ORTHO05D010945 6.9e-08 63.2 275 24.0
EL10Ac5g11789 Beta vulgaris HOM05D008595 ORTHO05D010945 6.9e-08 63.2 370 23.5
MD09G1027200 Malus domestica HOM05D005763 ORTHO05D005970 9.0e-08 62.8 258 26.0
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 1.2e-07 62.4 253 22.1
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 2.0e-07 61.6 248 23.8
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 2.0e-07 61.6 202 24.8
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.0e-07 61.6 260 21.9
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 2.6e-07 61.2 146 27.4
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 2.6e-07 61.2 193 24.9
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 2.6e-07 61.2 253 21.7
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.6e-07 61.2 251 25.1
Atru.chr6.1726 Acer truncatum HOM05D001309 ORTHO05D000385 3.4e-07 60.8 157 29.9
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 3.4e-07 60.8 179 24.6
AUR62039442 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.4e-07 60.8 121 28.1
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.4e-07 60.8 229 22.3
PSO017G0648 Papaver somniferum HOM05D013338 ORTHO05D014821 3.4e-07 60.8 118 32.2
PSO765G0105 Papaver somniferum HOM05D013338 ORTHO05D014821 3.4e-07 60.8 118 32.2
EL10Ac5g11888 Beta vulgaris HOM05D008595 ORTHO05D009929 4.5e-07 60.5 195 26.2
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 4.5e-07 60.5 201 26.4
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.5e-07 60.5 237 21.5
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.8e-07 60.1 167 28.7
RcHm_v2.0_Chr3g0460621 Rosa chinensis HOM05D007314 ORTHO05D003768 5.8e-07 60.1 211 27.0
Nitab4.5_0000789g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.6e-07 59.7 203 29.1
Hund20382 Selenicereus undatus HOM05D008455 ORTHO05D009597 7.6e-07 59.7 42 73.8
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 7.6e-07 59.7 186 25.3
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 9.9e-07 59.3 201 25.9
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 9.9e-07 59.3 201 25.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.9e-07 59.3 240 22.1
Nitab4.5_0000781g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.9e-07 59.3 206 26.2
Os10g0195100 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 9.9e-07 59.3 179 26.8
Os12g0417000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 9.9e-07 59.3 179 26.8
EL10Ac6g14350 Beta vulgaris HOM05D008595 ORTHO05D010945 1.3e-06 58.9 271 24.0
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.3e-06 58.9 297 26.6
EL10Ac5g11498 Beta vulgaris HOM05D008595 ORTHO05D010945 1.7e-06 58.5 470 22.8
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-06 57.8 238 24.4
COL.COLO4_08701 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.8e-06 57.4 176 31.2
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.8e-06 57.4 175 29.1
TAR369G0469 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.8e-06 57.4 143 28.7
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.9e-06 57.0 266 25.6
Manes.05G150103 Manihot esculenta HOM05D009290 ORTHO05D009597 4.9e-06 57.0 75 44.0
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.4e-06 56.6 171 26.3
Psat1g098040 Pisum sativum HOM05D009811 ORTHO05D007166 6.4e-06 56.6 150 26.0
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.4e-06 56.2 225 21.3
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 8.4e-06 56.2 260 22.3
Hund01727 Selenicereus undatus HOM05D008455 ORTHO05D381560 8.4e-06 56.2 34 79.4


User provided reference genes

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