Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 7.8e-197 690.3 347 100.0
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 2.8e-154 548.9 344 77.6
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 1.0e-151 540.4 345 76.8
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 3.0e-148 528.9 346 74.3
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 8.7e-148 527.3 328 76.5
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 1.6e-146 523.1 323 77.1
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 1.8e-145 519.6 344 72.7
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 4.1e-145 518.5 349 74.5
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 5.3e-145 518.1 326 75.8
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 5.3e-145 518.1 346 73.4
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 5.3e-145 518.1 327 74.3
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 5.3e-145 518.1 324 75.6
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 5.3e-145 518.1 323 76.5
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 9.0e-145 517.3 323 76.5
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 9.0e-145 517.3 344 73.5
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 1.5e-144 516.5 323 76.5
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 2.0e-144 516.2 323 75.9
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 2.0e-144 516.2 346 73.1
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 3.4e-144 515.4 322 74.8
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 5.9e-144 514.6 323 76.2
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 7.7e-144 514.2 325 75.1
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 7.7e-144 514.2 329 73.9
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 1.7e-143 513.1 323 75.2
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 2.9e-143 512.3 320 75.9
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 2.9e-143 512.3 343 71.4
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 6.5e-143 511.1 331 73.4
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 6.5e-143 511.1 344 71.2
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 1.4e-142 510.0 323 75.5
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 2.5e-142 509.2 326 73.6
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 3.2e-142 508.8 332 72.9
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 3.2e-142 508.8 320 75.9
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 3.2e-142 508.8 320 75.3
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 3.2e-142 508.8 325 75.1
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 4.2e-142 508.4 325 75.4
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 5.5e-142 508.1 325 75.1
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 9.4e-142 507.3 324 75.0
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 9.4e-142 507.3 347 73.8
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 9.4e-142 507.3 344 71.8
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 9.4e-142 507.3 344 71.8
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 1.2e-141 506.9 346 71.7
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 1.6e-141 506.5 347 71.8
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 1.6e-141 506.5 339 73.7
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 1.6e-141 506.5 333 73.9
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 1.6e-141 506.5 344 71.5
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 2.1e-141 506.1 345 72.5
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 2.1e-141 506.1 344 71.5
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 2.1e-141 506.1 344 71.2
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.7e-141 505.8 330 73.3
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 3.6e-141 505.4 344 72.1
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 4.6e-141 505.0 333 73.3
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 7.9e-141 504.2 322 74.2
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 1.0e-140 503.8 320 75.0
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 1.4e-140 503.4 340 71.5
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 1.4e-140 503.4 344 71.5
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 3.9e-140 501.9 318 75.2
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 5.1e-140 501.5 333 73.0
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 6.7e-140 501.1 345 72.8
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 8.8e-140 500.7 323 73.7
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 1.1e-139 500.4 343 71.1
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 1.5e-139 500.0 345 70.1
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 1.3e-138 496.9 351 68.9
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.8e-138 495.7 328 72.0
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 3.7e-138 495.4 339 71.1
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 6.3e-138 494.6 321 73.2
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 8.2e-138 494.2 328 71.6
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 1.4e-137 493.4 343 70.0
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 1.8e-137 493.0 316 74.1
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 1.8e-137 493.0 316 74.1
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 4.1e-137 491.9 331 70.7
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 4.1e-137 491.9 344 69.8
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 5.3e-137 491.5 325 71.1
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 9.1e-137 490.7 316 73.7
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.2e-136 490.3 299 80.3
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 2.0e-136 489.6 328 72.9
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 8.5e-135 484.2 337 70.9
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 1.1e-134 483.8 338 70.1
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 1.1e-134 483.8 337 70.9
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 3.2e-134 482.3 349 68.5
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 1.2e-133 480.3 324 70.1
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 6.1e-133 478.0 345 67.5
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 1.8e-132 476.5 319 70.5
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 3.9e-132 475.3 337 67.4
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 5.1e-132 474.9 324 70.1
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 1.1e-131 473.8 324 70.4
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 4.4e-131 471.9 324 69.8
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 2.8e-130 469.2 326 69.3
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 2.8e-130 469.2 328 68.9
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 1.2e-128 463.8 327 68.8
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 1.5e-128 463.4 322 69.6
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 1.5e-128 463.4 322 69.3
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 5.9e-128 461.5 327 68.5
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 8.5e-127 457.6 289 75.1
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 8.5e-127 457.6 291 74.2
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 1.6e-125 453.4 289 75.1
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 3.6e-125 452.2 348 67.0
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 4.7e-125 451.8 359 62.4
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 3.7e-122 442.2 321 66.4
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 8.2e-122 441.0 287 74.2
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 7.7e-120 434.5 363 64.5
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 2.7e-117 426.0 321 67.3
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 1.7e-114 416.8 254 77.2
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 3.7e-114 415.6 262 74.4
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 4.8e-114 415.2 345 61.2
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.1e-113 414.1 262 74.0
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 1.4e-113 413.7 278 71.9
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 1.3e-111 407.1 258 74.4
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 1.9e-102 376.7 324 59.6
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 2.5e-102 376.3 232 76.7
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.5e-102 376.3 262 68.7
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 2.8e-101 372.9 323 57.3
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 3.6e-101 372.5 325 58.5
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 6.6e-95 351.7 224 74.1
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 1.9e-78 297.0 309 51.1
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 9.5e-78 294.7 166 82.5
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 1.3e-71 274.2 207 63.3
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 3.9e-71 272.7 173 75.1
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 3.1e-68 263.1 273 53.5
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 6.0e-56 222.2 145 73.1
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 7.9e-56 221.9 206 57.3
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 2.5e-54 216.9 215 54.9
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 3.4e-51 206.5 331 36.9
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 5.1e-47 192.6 201 52.7
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 9.0e-44 181.8 410 31.2
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 1.0e-42 178.3 333 38.4
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 1.0e-39 168.3 242 40.5
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 1.8e-39 167.5 120 66.7
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 2.2e-34 150.6 319 34.5
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 5.0e-34 149.4 114 64.9
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 1.4e-28 131.3 232 40.5
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 1.1e-20 105.1 57 86.0
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 4.4e-14 83.2 249 29.7
Rhsim03G0241200 Rhododendron simsii HOM05D002908 ORTHO05D050692 2.8e-13 80.5 45 75.6
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 2.6e-11 73.9 98 42.9
Rhsim12G0105800 Rhododendron simsii HOM05D002908 ORTHO05D340239 7.2e-09 65.9 52 57.7
Solyc12g027700.1 Solanum lycopersicum HOM05D002908 ORTHO05D050692 2.7e-08 63.9 30 86.7
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 6.1e-08 62.8 78 44.9
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 8.0e-08 62.4 41 75.6
Nitab4.5_0016721g0010 Nicotiana tabacum HOM05D002908 ORTHO05D283189 9.7e-06 55.5 85 41.2


User provided reference genes

Program Settings