Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 1.4e-194 682.9 384 100.0
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 1.2e-129 467.2 338 72.2
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 1.0e-128 464.2 338 72.2
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 9.4e-127 457.6 338 71.3
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 4.0e-125 452.2 335 79.4
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 6.7e-125 451.4 350 77.1
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 1.7e-123 446.8 306 74.8
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 2.2e-123 446.4 305 75.4
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 3.7e-123 445.7 340 70.0
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 1.4e-122 443.7 308 74.7
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 5.3e-122 441.8 330 79.7
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 5.3e-122 441.8 308 74.4
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 1.2e-121 440.7 302 85.4
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 4.5e-121 438.7 340 67.6
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 7.7e-121 438.0 306 73.5
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 1.3e-120 437.2 338 76.0
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 1.7e-120 436.8 338 70.4
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 1.1e-119 434.1 340 69.1
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 1.5e-119 433.7 300 73.7
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 1.5e-119 433.7 300 73.7
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.5e-119 433.7 289 77.5
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 3.2e-119 432.6 325 70.8
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 1.2e-118 430.6 302 81.5
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 1.6e-118 430.3 303 72.3
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 2.7e-118 429.5 306 74.2
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 3.6e-118 429.1 328 69.2
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 4.7e-118 428.7 337 74.2
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 6.1e-118 428.3 298 81.5
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 6.1e-118 428.3 302 72.5
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 8.0e-118 427.9 303 72.6
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 1.0e-117 427.6 302 72.5
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.8e-117 426.8 324 70.4
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 4.0e-117 425.6 342 66.7
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 6.8e-117 424.9 318 71.7
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 8.8e-117 424.5 324 70.7
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 1.2e-116 424.1 302 71.9
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 1.2e-116 424.1 325 68.6
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 1.2e-116 424.1 325 68.9
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 1.5e-116 423.7 334 66.8
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 1.5e-116 423.7 344 66.6
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 2.0e-116 423.3 317 70.0
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 2.6e-116 422.9 331 66.5
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 2.6e-116 422.9 306 73.2
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 2.6e-116 422.9 329 67.5
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 3.4e-116 422.5 312 79.5
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 3.4e-116 422.5 331 66.2
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 3.4e-116 422.5 307 71.0
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 4.4e-116 422.2 329 67.5
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 5.7e-116 421.8 331 69.2
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 7.5e-116 421.4 337 74.2
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 7.5e-116 421.4 301 71.4
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 7.5e-116 421.4 310 71.6
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.3e-115 420.6 331 66.2
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 1.3e-115 420.6 308 70.8
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 1.7e-115 420.2 317 71.0
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 1.7e-115 420.2 308 72.1
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 2.2e-115 419.9 337 73.9
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 2.2e-115 419.9 346 72.8
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 6.3e-115 418.3 337 73.6
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 1.1e-114 417.5 337 73.9
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 1.1e-114 417.5 336 73.5
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 1.4e-114 417.2 301 71.4
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 2.4e-114 416.4 309 71.8
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 5.4e-114 415.2 324 71.0
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 5.4e-114 415.2 296 72.3
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 5.4e-114 415.2 340 64.7
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.2e-113 414.1 336 73.5
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 1.6e-113 413.7 309 68.9
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 1.6e-113 413.7 332 73.8
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 1.6e-113 413.7 318 76.4
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 1.6e-113 413.7 313 69.6
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 4.5e-113 412.1 318 76.1
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 5.9e-113 411.8 338 66.3
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 5.9e-113 411.8 338 72.8
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 5.9e-113 411.8 307 72.0
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 1.0e-112 411.0 294 73.5
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 1.3e-112 410.6 298 74.8
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 2.9e-112 409.5 281 85.1
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 2.9e-112 409.5 291 71.8
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 2.9e-112 409.5 308 71.4
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 6.5e-112 408.3 316 69.0
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 6.5e-112 408.3 298 72.1
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 1.9e-111 406.8 292 71.9
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 1.9e-111 406.8 309 68.9
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 2.5e-111 406.4 329 66.3
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 2.5e-111 406.4 288 81.9
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 3.2e-111 406.0 294 71.8
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 9.5e-111 404.4 306 68.6
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 9.5e-111 404.4 306 68.6
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 9.5e-111 404.4 348 69.8
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 1.6e-110 403.7 293 71.7
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 2.1e-110 403.3 306 68.3
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 2.7e-110 402.9 293 72.0
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 2.7e-110 402.9 294 70.7
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 2.7e-110 402.9 292 72.3
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 6.1e-110 401.7 293 71.7
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 5.2e-109 398.7 314 68.8
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 8.8e-109 397.9 290 72.1
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 1.2e-108 397.5 307 69.4
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 1.2e-108 397.5 300 70.0
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 1.3e-107 394.0 260 81.2
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 3.1e-106 389.4 300 69.0
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 4.5e-105 385.6 290 70.3
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 6.6e-104 381.7 308 67.5
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 1.5e-103 380.6 247 81.0
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 7.3e-103 378.3 337 69.1
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 2.1e-102 376.7 272 71.0
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 1.3e-99 367.5 238 91.2
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 1.6e-97 360.5 289 66.4
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 4.3e-95 352.4 332 58.7
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 2.1e-94 350.1 255 71.0
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 5.2e-93 345.5 293 64.5
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 9.8e-92 341.3 261 69.7
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 2.2e-91 340.1 311 60.8
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 2.4e-90 336.7 256 69.9
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 3.2e-90 336.3 286 61.9
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 3.5e-89 332.8 309 58.6
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 2.5e-87 326.6 318 68.6
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 1.7e-83 313.9 327 55.0
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 6.4e-83 312.0 245 69.0
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 5.2e-77 292.4 252 60.3
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 7.3e-71 271.9 256 55.1
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 2.2e-67 260.4 177 79.1
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 2.3e-64 250.4 149 85.9
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 1.8e-61 240.7 277 49.1
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 4.0e-53 213.0 146 75.3
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 2.4e-50 203.8 218 55.0
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 1.6e-49 201.1 203 54.2
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 1.7e-43 181.0 103 88.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 7.6e-36 155.6 103 76.7
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 7.6e-36 155.6 103 76.7
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 1.5e-31 141.4 89 75.3
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 6.3e-30 136.0 93 66.7
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 6.9e-21 105.9 63 84.1
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 2.9e-11 73.9 42 78.6
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 9.4e-10 68.9 221 25.3
Actinidia29179 Actinidia chinensis HOM05D005591 ORTHO05D007131 2.2e-06 57.8 201 27.9


User provided reference genes

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