Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 4.4e-56 221.1 115 100.0
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 5.9e-24 114.4 114 63.2
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 7.9e-21 104.0 91 68.1
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 3.3e-19 98.6 108 55.6
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 1.3e-18 96.7 110 53.6
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 4.8e-18 94.7 112 56.2
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 6.3e-18 94.4 109 53.2
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 8.2e-18 94.0 110 51.8
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.1e-17 93.6 109 53.2
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 1.1e-17 93.6 110 54.5
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.4e-17 93.2 109 53.2
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 2.4e-17 92.4 108 51.9
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.2e-16 90.1 107 49.5
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 2.0e-16 89.4 109 52.3
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 2.0e-16 89.4 103 56.3
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 2.0e-16 89.4 110 59.1
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 7.7e-16 87.4 110 50.0
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 7.7e-16 87.4 111 49.5
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 1.0e-15 87.0 114 50.9
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 1.0e-15 87.0 107 47.7
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.0e-15 87.0 107 48.6
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 1.3e-15 86.7 112 51.8
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 2.2e-15 85.9 104 52.9
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 2.9e-15 85.5 106 51.9
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 2.9e-15 85.5 106 51.9
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 5.0e-15 84.7 108 50.0
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 6.5e-15 84.3 108 50.0
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 8.5e-15 84.0 102 49.0
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 1.4e-14 83.2 115 51.3
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 1.4e-14 83.2 110 50.0
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.9e-14 82.8 97 50.5
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 1.9e-14 82.8 80 60.0
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 4.2e-14 81.6 108 51.9
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 1.2e-13 80.1 112 50.9
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 1.6e-13 79.7 116 50.0
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.6e-13 79.7 107 49.5
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 2.1e-13 79.3 99 51.5
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 2.1e-13 79.3 111 46.8
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 4.6e-13 78.2 99 50.5
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 4.6e-13 78.2 38 100.0
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 4.6e-13 78.2 78 55.1
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 7.9e-13 77.4 107 48.6
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 1.0e-12 77.0 113 44.2
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 1.4e-12 76.6 109 50.5
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 2.3e-12 75.9 119 44.5
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 2.3e-12 75.9 100 48.0
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 3.0e-12 75.5 110 49.1
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 3.9e-12 75.1 79 49.4
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 3.9e-12 75.1 110 47.3
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 3.9e-12 75.1 106 48.1
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 5.1e-12 74.7 83 51.8
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 6.7e-12 74.3 83 50.6
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 8.8e-12 73.9 107 47.7
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 8.8e-12 73.9 68 61.8
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 8.8e-12 73.9 115 44.3
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 2.0e-11 72.8 94 45.7
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 2.0e-11 72.8 94 45.7
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 2.0e-11 72.8 94 45.7
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 2.0e-11 72.8 94 45.7
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 2.0e-11 72.8 115 45.2
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 2.0e-11 72.8 114 43.9
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 2.0e-11 72.8 119 44.5
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 3.3e-11 72.0 98 43.9
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 3.3e-11 72.0 116 45.7
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 4.3e-11 71.6 78 51.3
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 4.3e-11 71.6 117 42.7
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 5.7e-11 71.2 110 48.2
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 5.7e-11 71.2 110 48.2
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 5.7e-11 71.2 113 45.1
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 5.7e-11 71.2 115 43.5
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 7.4e-11 70.9 94 47.9
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 7.4e-11 70.9 129 45.7
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 7.4e-11 70.9 120 45.8
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 7.4e-11 70.9 106 38.7
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 9.7e-11 70.5 96 46.9
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 9.7e-11 70.5 78 51.3
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 9.7e-11 70.5 78 51.3
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 1.3e-10 70.1 109 42.2
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 1.3e-10 70.1 96 45.8
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 1.3e-10 70.1 109 43.1
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 1.3e-10 70.1 85 51.8
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 1.7e-10 69.7 90 45.6
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 1.7e-10 69.7 105 43.8
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 1.7e-10 69.7 78 48.7
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 2.2e-10 69.3 96 45.8
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 2.8e-10 68.9 87 48.3
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 4.8e-10 68.2 104 41.3
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 1.1e-09 67.0 103 42.7
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 1.4e-09 66.6 89 51.7
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 1.4e-09 66.6 85 49.4
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 1.8e-09 66.2 111 47.7
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 2.4e-09 65.9 105 46.7
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 2.4e-09 65.9 107 43.0
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 4.1e-09 65.1 57 56.1
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 5.3e-09 64.7 117 47.0
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 6.9e-09 64.3 38 81.6
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 1.5e-08 63.2 76 47.4
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 1.5e-08 63.2 117 41.0
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 3.4e-08 62.0 74 52.7
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 5.9e-08 61.2 76 46.1
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 1.3e-07 60.1 35 71.4
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 1.7e-07 59.7 89 43.8
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 2.2e-07 59.3 35 77.1
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 3.8e-07 58.5 39 76.9
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 5.0e-07 58.2 108 41.7
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.9e-06 56.2 74 43.2
arahy.Tifrunner.gnm1.ann1.RQ0K0U Arachis hypogaea HOM05D002734 ORTHO05D003035 3.2e-06 55.5 42 61.9
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 3.2e-06 55.5 111 37.8
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 4.2e-06 55.1 111 37.8
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 5.5e-06 54.7 61 47.5


User provided reference genes

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