Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.5e-61 240.0 186 100.0
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 1.8e-43 179.9 180 85.0
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 4.1e-43 178.7 170 89.4
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 4.1e-43 178.7 178 86.0
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 4.1e-43 178.7 168 90.5
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 7.0e-43 177.9 180 78.9
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 7.0e-43 177.9 174 82.2
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 1.6e-42 176.8 178 85.4
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 2.6e-42 176.0 181 85.1
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 3.5e-42 175.6 179 83.8
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 7.7e-42 174.5 185 82.7
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 1.0e-41 174.1 185 82.2
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 3.8e-41 172.2 177 83.1
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 3.8e-41 172.2 172 86.0
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 5.0e-41 171.8 179 82.7
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 5.0e-41 171.8 168 89.3
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 6.5e-41 171.4 177 83.6
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 8.5e-41 171.0 176 83.5
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 8.5e-41 171.0 177 84.2
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 1.1e-40 170.6 177 83.1
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 1.1e-40 170.6 178 82.6
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.5e-40 170.2 173 82.7
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.5e-40 170.2 183 77.6
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.9e-40 169.9 180 82.2
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.9e-40 169.9 183 75.4
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 3.2e-40 169.1 171 86.5
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 4.2e-40 168.7 184 81.0
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 4.2e-40 168.7 177 82.5
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 7.2e-40 167.9 167 83.2
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 7.2e-40 167.9 183 83.6
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 9.4e-40 167.5 169 82.8
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 1.2e-39 167.2 177 79.1
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 1.2e-39 167.2 171 83.0
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 1.2e-39 167.2 169 82.2
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.6e-39 166.8 183 83.1
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 1.6e-39 166.8 165 89.7
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 2.1e-39 166.4 170 85.3
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 2.7e-39 166.0 178 82.0
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 3.6e-39 165.6 182 79.1
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.6e-39 165.6 178 79.2
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.6e-39 165.6 178 79.2
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 6.1e-39 164.9 177 81.9
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.4e-38 163.7 169 81.7
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 1.4e-38 163.7 168 86.9
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.8e-38 163.3 178 78.7
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.3e-38 162.9 183 68.9
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 4.0e-38 162.2 186 76.3
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 4.0e-38 162.2 193 77.2
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 8.8e-38 161.0 172 80.2
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 1.5e-37 160.2 173 84.4
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.5e-37 160.2 195 68.2
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 2.0e-37 159.8 179 80.4
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 2.6e-37 159.5 179 78.8
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 3.3e-37 159.1 166 86.7
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 4.4e-37 158.7 178 78.1
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 9.7e-37 157.5 178 82.6
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 9.7e-37 157.5 171 83.0
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 2.2e-36 156.4 179 76.5
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 3.7e-36 155.6 175 81.1
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 3.7e-36 155.6 180 77.2
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 8.3e-36 154.5 172 83.7
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 8.3e-36 154.5 184 76.6
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.1e-35 154.1 179 81.0
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.4e-35 153.7 199 57.3
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 1.8e-35 153.3 173 79.8
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 2.4e-35 152.9 161 84.5
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 7.0e-35 151.4 185 77.8
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 2.7e-34 149.4 178 77.5
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 3.2e-32 142.5 175 74.3
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 5.5e-32 141.7 158 84.2
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 9.4e-32 141.0 187 73.8
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 2.7e-31 139.4 143 89.5
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 3.6e-31 139.0 140 92.1
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 4.7e-31 138.7 187 73.3
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.8e-30 136.7 148 83.8
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.8e-30 136.7 169 75.1
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.0e-30 136.0 174 79.9
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 8.8e-30 134.4 175 78.3
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 5.7e-29 131.7 185 68.1
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.5e-29 131.3 162 77.2
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.3e-28 130.6 175 76.6
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 1.4e-27 127.1 165 73.9
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 7.7e-26 121.3 63 100.0
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 1.7e-25 120.2 166 62.0
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 2.3e-25 119.8 177 67.8
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 2.3e-25 119.8 177 67.8
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 2.3e-25 119.8 177 67.8
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.5e-24 117.1 160 70.6
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 4.2e-24 115.5 163 63.2
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 2.1e-23 113.2 168 67.9
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 2.3e-22 109.8 185 62.2
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 4.0e-22 109.0 177 65.0
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 4.0e-22 109.0 177 65.0
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 4.0e-22 109.0 185 63.8
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 4.0e-22 109.0 60 83.3
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 8.9e-22 107.8 177 64.4
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 2.0e-21 106.7 126 91.3
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 3.4e-21 105.9 54 92.6
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 4.4e-21 105.5 179 55.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.3e-20 104.0 170 67.6
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 4.9e-20 102.1 144 77.1
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 2.4e-19 99.8 173 65.3
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 4.1e-19 99.0 65 75.4
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-18 97.4 69 76.8
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-18 97.4 69 76.8
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 7.8e-18 94.7 60 83.3
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 8.6e-17 91.3 163 68.7
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.0e-14 84.3 64 68.8
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.3e-12 77.4 47 72.3
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 4.9e-12 75.5 174 64.9
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.1e-11 74.3 36 86.1
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 2.4e-11 73.2 57 73.7
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.2e-11 72.8 38 89.5
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.1e-08 64.3 37 81.1
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 1.5e-08 63.9 60 55.0
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 2.1e-07 60.1 71 47.9


User provided reference genes

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