Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0028F.1_g017800 Hydrangea macrophylla HOM05D001390 ORTHO05D036423 4.9e-151 538.1 343 100.0
Dinv42815 Davidia involucrata HOM05D001390 ORTHO05D001522 6.3e-82 308.5 367 60.2
Dinv43285 Davidia involucrata HOM05D001390 ORTHO05D001522 6.3e-82 308.5 367 60.2
Actinidia29991 Actinidia chinensis HOM05D001390 ORTHO05D001522 6.1e-69 265.4 363 48.2
Haze_19123 Corylus avellana HOM05D001390 ORTHO05D001522 4.0e-68 262.7 305 59.0
Actinidia20939 Actinidia chinensis HOM05D001390 ORTHO05D001522 8.8e-68 261.5 369 45.8
Haze_19119 Corylus avellana HOM05D001390 ORTHO05D001522 1.5e-67 260.8 305 58.7
QL02p094245 Quercus lobata HOM05D001390 ORTHO05D001522 6.3e-66 255.4 360 48.3
Manes.06G032200 Manihot esculenta HOM05D001390 ORTHO05D001522 1.4e-65 254.2 353 51.8
Potri.006G180100 Populus trichocarpa HOM05D001390 ORTHO05D001522 4.1e-65 252.7 305 56.7
CSS0021466 Camellia sinensis var. sinensis HOM05D001390 ORTHO05D001522 1.2e-64 251.1 354 51.1
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 1.6e-64 250.8 305 57.4
Lj9C722T0 Lonicera japonica HOM05D001390 ORTHO05D001522 7.7e-64 248.4 353 45.9
CANSAT11G0702 Cannabis sativa HOM05D001390 ORTHO05D001522 1.5e-62 244.2 288 55.2
Prupe.1G101800 Prunus persica HOM05D001390 ORTHO05D001522 3.6e-61 239.6 344 49.7
Thecc.09G154400 Theobroma cacao HOM05D001390 ORTHO05D001522 3.6e-61 239.6 356 47.2
Potri.018G102500 Populus trichocarpa HOM05D001390 ORTHO05D001522 1.0e-60 238.0 355 49.9
CiPaw.15G164000 Carya illinoinensis HOM05D001390 ORTHO05D001522 1.4e-60 237.7 356 52.0
RcHm_v2.0_Chr4g0405441 Rosa chinensis HOM05D001390 ORTHO05D001522 1.4e-60 237.7 297 56.2
Duzib168G0337 Durio zibethinus HOM05D001390 ORTHO05D001522 1.8e-60 237.3 350 49.7
Sabra18G0088100 Salix brachista HOM05D001390 ORTHO05D001522 2.3e-60 236.9 304 51.0
Sabra06G0137100 Salix brachista HOM05D001390 ORTHO05D001522 5.2e-60 235.7 304 53.9
FAN25G2837 Fragaria x ananassa HOM05D001390 ORTHO05D001522 8.9e-60 235.0 292 55.5
FAN11G3147 Fragaria x ananassa HOM05D001390 ORTHO05D001522 1.2e-59 234.6 292 55.1
FAN16G1655 Fragaria x ananassa HOM05D001390 ORTHO05D001522 1.5e-59 234.2 292 55.8
Atru.chr7.368 Acer truncatum HOM05D001390 ORTHO05D001522 2.6e-59 233.4 311 49.2
COL.COLO4_36574 Corchorus olitorius HOM05D001390 ORTHO05D001522 3.4e-59 233.0 343 48.1
Rhsim01G0023400 Rhododendron simsii HOM05D001390 ORTHO05D001522 3.4e-59 233.0 305 48.5
FvH4_3g24640 Fragaria vesca HOM05D001390 ORTHO05D001522 4.4e-59 232.6 292 54.8
DCAR_020092 Daucus carota HOM05D001390 ORTHO05D001522 5.7e-59 232.3 340 47.6
vmacro13048 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 5.7e-59 232.3 301 50.5
vmacro13071 Vaccinium macrocarpon HOM05D001390 ORTHO05D001522 5.7e-59 232.3 301 50.5
EL10Ac8g18904 Beta vulgaris HOM05D001390 ORTHO05D001522 7.5e-59 231.9 299 51.5
Gohir.A04G058100 Gossypium hirsutum HOM05D001390 ORTHO05D001522 1.3e-58 231.1 350 48.9
Gorai.012G098300 Gossypium raimondii HOM05D001390 ORTHO05D001522 1.3e-58 231.1 350 48.9
Nitab4.5_0002809g0030 Nicotiana tabacum HOM05D001390 ORTHO05D001522 1.7e-58 230.7 312 51.3
Nitab4.5_0003759g0040 Nicotiana tabacum HOM05D001390 ORTHO05D001522 2.8e-58 229.9 299 50.8
PGSC0003DMG400011213 Solanum tuberosum HOM05D001390 ORTHO05D001522 2.8e-58 229.9 313 48.2
Sed0009348 Sechium edule HOM05D001390 ORTHO05D001522 4.9e-58 229.2 298 53.0
MBI15_g26071_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 1.4e-57 227.6 288 53.8
FAN21G2207 Fragaria x ananassa HOM05D001390 ORTHO05D001522 5.4e-57 225.7 286 55.2
Ciclev10007232m.g Citrus clementina HOM05D001390 ORTHO05D001522 7.0e-57 225.3 292 53.8
TWI32G0638 Tripterygium wilfordii HOM05D001390 ORTHO05D001522 2.7e-56 223.4 313 51.4
MD16G1258600 Malus domestica HOM05D001390 ORTHO05D001522 5.9e-56 222.2 124 82.3
Solyc07g006030.4 Solanum lycopersicum HOM05D001390 ORTHO05D001522 5.9e-56 222.2 303 49.2
Sopen07g002170 Solanum pennellii HOM05D001390 ORTHO05D001522 1.3e-55 221.1 303 48.8
ClCG06G012670 Citrullus lanatus HOM05D001390 ORTHO05D001522 1.7e-55 220.7 284 55.6
CAN.G1190.19 Capsicum annuum HOM05D001390 ORTHO05D001522 3.9e-55 219.5 304 50.7
Cc06_g14470 Coffea canephora HOM05D001390 ORTHO05D001522 1.1e-54 218.0 346 45.1
TAR626G1668 Trochodendron aralioides HOM05D001390 ORTHO05D001522 4.3e-54 216.1 286 52.1
Eucgr.C00239 Eucalyptus grandis HOM05D001390 ORTHO05D001522 9.5e-54 214.9 351 46.4
Peaxi162Scf00038g00731 Petunia axillaris HOM05D001390 ORTHO05D001522 9.5e-54 214.9 320 48.8
MELO3C010197.2 Cucumis melo HOM05D001390 ORTHO05D001522 1.2e-53 214.5 294 51.4
GSVIVG01023695001 Vitis vinifera HOM05D001390 ORTHO05D036423 1.6e-53 214.2 125 83.2
Oeu010281.1 Olea europaea HOM05D001390 ORTHO05D001522 2.8e-53 213.4 378 47.9
Cpa.g.sc199.12 Carica papaya HOM05D001390 ORTHO05D001522 1.0e-52 211.5 352 46.3
Cc02_g28850 Coffea canephora HOM05D001390 ORTHO05D001522 1.0e-52 211.5 360 42.2
TAR024G0001 Trochodendron aralioides HOM05D001390 ORTHO05D036423 2.3e-52 210.3 283 45.6
TWI63G0228 Tripterygium wilfordii HOM05D001390 ORTHO05D001522 3.1e-52 209.9 124 81.5
TAR026G0002 Trochodendron aralioides HOM05D001390 ORTHO05D001522 1.2e-51 208.0 283 45.9
Hund03300 Selenicereus undatus HOM05D001390 ORTHO05D001522 3.4e-51 206.5 281 49.5
Lalb_Chr23g0275611 Lupinus albus HOM05D001390 ORTHO05D001522 4.4e-51 206.1 297 50.5
PGR142G1728 Punica granatum HOM05D001390 ORTHO05D001522 1.3e-50 204.5 303 49.8
PSO017G3681 Papaver somniferum HOM05D001390 ORTHO05D001522 3.7e-50 203.0 306 43.5
CsaV3_1G029220 Cucumis sativus L. HOM05D001390 ORTHO05D001522 6.4e-50 202.2 279 50.2
SalBow6G5231 Salvia bowleyana HOM05D001390 ORTHO05D001522 6.4e-50 202.2 303 48.5
Ah.14g084360 Amaranthus hybridus HOM05D001390 ORTHO05D001522 1.9e-49 200.7 292 49.0
AUR62028376 Chenopodium quinoa HOM05D001390 ORTHO05D001522 9.2e-49 198.4 125 74.4
AUR62025375 Chenopodium quinoa HOM05D001390 ORTHO05D001522 3.5e-48 196.4 125 73.6
Aqoxy7G02377 Aquilegia oxysepala HOM05D001390 ORTHO05D001522 7.8e-48 195.3 299 51.8
MBI14_g16444_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 2.3e-47 193.7 287 48.4
arahy.Tifrunner.gnm1.ann1.IQ8CLR Arachis hypogaea HOM05D001390 ORTHO05D001522 3.0e-47 193.4 386 43.5
PSO170G0943 Papaver somniferum HOM05D001390 ORTHO05D001522 3.0e-47 193.4 312 40.7
VMungo1309G2092 Vigna mungo HOM05D001390 ORTHO05D001522 1.1e-46 191.4 300 50.7
Lj6g0019418 Lotus japonicus HOM05D001390 ORTHO05D001522 1.9e-46 190.7 309 46.0
arahy.Tifrunner.gnm1.ann1.G68EH0 Arachis hypogaea HOM05D001390 ORTHO05D001522 5.6e-46 189.1 392 41.1
HanXRQChr12g0357871 Helianthus annuus HOM05D001390 ORTHO05D001522 1.2e-45 188.0 289 49.5
Phvul.009G195600 Phaseolus vulgaris HOM05D001390 ORTHO05D001522 1.2e-45 188.0 302 49.7
Glyma.06G223500 Glycine max HOM05D001390 ORTHO05D001522 2.1e-45 187.2 300 48.0
Lalb_Chr08g0234321 Lupinus albus HOM05D001390 ORTHO05D001522 2.8e-45 186.8 124 74.2
Glyma.04G156200 Glycine max HOM05D001390 ORTHO05D001522 4.7e-45 186.0 294 49.0
ECA234G1663 Erigeron canadensis HOM05D001390 ORTHO05D001522 1.1e-44 184.9 337 44.2
Aa31sc57G100 Aethionema arabicum HOM05D001390 ORTHO05D001522 1.4e-44 184.5 295 42.0
CARHR235780 Cardamine hirsuta HOM05D001390 ORTHO05D001522 1.4e-44 184.5 348 39.4
Migut.K00300 Erythranthe guttata HOM05D001390 ORTHO05D001522 3.4e-43 179.9 309 45.0
Lj7C464G5 Lonicera japonica HOM05D001390 ORTHO05D001522 8.3e-42 175.3 292 49.0
Psat1g023440 Pisum sativum HOM05D001390 ORTHO05D001522 1.1e-41 174.9 291 43.0
AT4G28080 Arabidopsis thaliana HOM05D001390 ORTHO05D001522 3.2e-41 173.3 293 45.1
Carub.0007s1270 Capsella rubella HOM05D001390 ORTHO05D001522 3.2e-41 173.3 299 45.8
TPR.G9534 Trifolium pratense HOM05D001390 ORTHO05D001522 2.7e-40 170.2 292 46.2
AL7G24530 Arabidopsis lyrata HOM05D001390 ORTHO05D001522 3.5e-40 169.9 295 40.0
C07p55910 Brassica napus HOM05D001390 ORTHO05D001522 3.5e-40 169.9 292 41.8
THA.LOC104811829 Tarenaya hassleriana HOM05D001390 ORTHO05D001522 3.5e-40 169.9 285 41.1
Lsat_1_v5_gn_8_64840 Lactuca sativa HOM05D001390 ORTHO05D001522 4.6e-40 169.5 122 73.0
BcaC07g38314 Brassica carinata HOM05D001390 ORTHO05D001522 6.0e-40 169.1 127 66.9
C08p10640 Brassica napus HOM05D001390 ORTHO05D001522 6.0e-40 169.1 127 66.9
A08p20230 Brassica napus HOM05D001390 ORTHO05D001522 7.8e-40 168.7 127 66.9
BraA08t33982Z Brassica rapa HOM05D001390 ORTHO05D001522 7.8e-40 168.7 127 66.9
BolC8t48737H Brassica oleracea HOM05D001390 ORTHO05D001522 1.3e-39 167.9 127 66.1
Thhalv10024196m.g Eutrema salsugineum HOM05D001390 ORTHO05D001522 1.7e-39 167.5 294 44.9
Sp7g26030 Schrenkiella parvula HOM05D001390 ORTHO05D001522 2.3e-39 167.2 127 64.6
BcaB03g12556 Brassica carinata HOM05D001390 ORTHO05D001522 3.0e-39 166.8 126 65.1
A03p57700 Brassica napus HOM05D001390 ORTHO05D001522 3.9e-39 166.4 127 66.1
BolC7t46069H Brassica oleracea HOM05D001390 ORTHO05D001522 1.1e-38 164.9 127 65.4
BcaC06g32647 Brassica carinata HOM05D001390 ORTHO05D001522 1.9e-38 164.1 127 64.6
ECA236G3083 Erigeron canadensis HOM05D001390 ORTHO05D001522 4.7e-37 159.5 125 66.4
Sc14g0001000 Simmondsia chinensis HOM05D001390 ORTHO05D001522 1.1e-36 158.3 126 66.7
BraA03t14837Z Brassica rapa HOM05D001390 ORTHO05D001522 1.8e-36 157.5 286 40.2
ATR0580G237 Amborella trichopoda HOM05D001390 ORTHO05D001522 1.4e-33 147.9 127 64.6
Zm00001eb257660 Zea mays HOM05D001390 ORTHO05D001522 2.4e-33 147.1 124 61.3
HPP92_015355 Vanilla planifolia HOM05D001390 ORTHO05D001522 7.1e-33 145.6 124 62.1
Lsat_1_v5_gn_5_88580 Lactuca sativa HOM05D001390 ORTHO05D001522 2.1e-32 144.1 124 62.9
SGA_v2.0_scaffold265G46076 Striga asiatica HOM05D001390 ORTHO05D001522 3.3e-30 136.7 124 62.1
SEGI_20336 Sequoiadendron giganteum HOM05D001390 ORTHO05D001522 7.3e-22 109.0 131 49.6
Aqoxy7G03611 Aquilegia oxysepala HOM05D001390 ORTHO05D001522 5.8e-11 72.8 124 39.5
Gohir.D04G088100 Gossypium hirsutum HOM05D001390 ORTHO05D001522 1.4e-09 68.2 97 46.4
PSO017G0796 Papaver somniferum HOM05D001390 ORTHO05D001522 3.0e-07 60.5 115 40.0
MBI15_g34219_MAGBIO Magnolia biondii HOM05D001390 ORTHO05D001522 6.7e-07 59.3 125 37.6
PSO170G6700 Papaver somniferum HOM05D001390 ORTHO05D001522 1.1e-06 58.5 121 38.8
Os04g0645100 Oryza sativa ssp. japonica HOM05D001390 ORTHO05D001522 1.5e-06 58.2 126 37.3
CiPaw.01G249900 Carya illinoinensis HOM05D001390 ORTHO05D001522 2.5e-06 57.4 118 39.0
Zm00001eb068620 Zea mays HOM05D001390 ORTHO05D001522 5.6e-06 56.2 117 35.0


User provided reference genes

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