Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hma1.2p1_0018F.1_g012440 Hydrangea macrophylla HOM05D003776 ORTHO05D004459 1.0e-233 813.1 445 100.0
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 9.0e-105 384.8 210 91.0
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 1.3e-103 380.9 210 88.6
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 1.7e-103 380.6 210 89.0
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 2.9e-103 379.8 210 88.6
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 3.8e-103 379.4 210 90.0
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 1.9e-102 377.1 232 81.0
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 2.7e-101 373.2 210 87.6
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 4.6e-101 372.5 210 87.1
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 6.0e-101 372.1 210 87.6
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 1.0e-100 371.3 242 79.3
COL.COLO4_35084 Corchorus olitorius HOM05D003776 ORTHO05D004459 1.0e-100 371.3 210 86.7
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 1.8e-100 370.5 210 87.1
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 3.0e-100 369.8 210 85.2
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 3.9e-100 369.4 210 87.1
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.9e-100 369.4 212 89.2
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 1.5e-99 367.5 210 86.7
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 1.9e-99 367.1 210 84.3
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 1.9e-99 367.1 232 81.9
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 4.3e-99 365.9 210 86.2
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 5.6e-99 365.5 210 83.8
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 1.3e-98 364.4 210 86.2
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 2.1e-98 363.6 210 86.2
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 2.1e-98 363.6 210 85.2
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 2.8e-98 363.2 210 85.2
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 8.1e-98 361.7 210 85.7
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 1.1e-97 361.3 210 86.2
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 4.0e-97 359.4 210 84.8
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 2.6e-96 356.7 210 81.9
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 3.4e-96 356.3 210 83.8
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 4.5e-96 355.9 210 83.3
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 5.8e-96 355.5 232 77.6
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 5.8e-96 355.5 210 84.8
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 1.0e-95 354.8 210 82.9
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 1.3e-95 354.4 210 83.8
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 2.9e-95 353.2 210 83.3
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.1e-94 351.3 210 83.3
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 2.5e-94 350.1 210 82.4
Nitab4.5_0008846g0010 Nicotiana tabacum HOM05D003776 ORTHO05D004459 2.5e-94 350.1 215 80.5
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 3.2e-94 349.7 210 81.9
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 4.2e-94 349.4 209 81.8
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 5.5e-94 349.0 210 82.4
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 7.1e-94 348.6 210 81.9
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 7.1e-94 348.6 224 79.5
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 1.2e-93 347.8 210 81.9
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 1.2e-93 347.8 230 77.0
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 1.2e-93 347.8 210 82.4
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 1.6e-93 347.4 210 81.4
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 3.5e-93 346.3 210 82.4
Oeu055885.1 Olea europaea HOM05D003776 ORTHO05D004459 4.6e-93 345.9 215 80.0
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 6.0e-93 345.5 228 76.8
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 1.0e-92 344.7 210 82.4
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 3.0e-92 343.2 210 82.4
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 3.0e-92 343.2 214 80.8
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 3.9e-92 342.8 210 81.0
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 6.7e-92 342.0 210 82.4
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 8.7e-92 341.7 210 80.5
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 8.7e-92 341.7 230 75.7
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 8.7e-92 341.7 230 75.7
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 8.7e-92 341.7 210 81.9
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 1.1e-91 341.3 210 80.0
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 1.9e-91 340.5 214 79.9
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.3e-91 339.3 210 81.4
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 2.8e-90 336.7 222 77.0
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 2.8e-90 336.7 237 73.8
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 2.6e-88 330.1 214 77.6
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 5.8e-88 328.9 210 78.1
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 5.8e-88 328.9 210 74.8
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 2.2e-87 327.0 210 78.1
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 2.9e-87 326.6 210 78.6
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 6.5e-87 325.5 210 78.6
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 2.5e-86 323.6 210 76.7
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 2.5e-86 323.6 210 76.7
ATR0322G072 Amborella trichopoda HOM05D003776 ORTHO05D004459 9.3e-86 321.6 210 74.8
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 9.3e-86 321.6 210 76.7
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 1.2e-85 321.2 210 76.7
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 4.6e-85 319.3 210 76.2
Zm00001eb235620 Zea mays HOM05D003776 ORTHO05D004459 6.1e-85 318.9 210 73.3
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 1.0e-84 318.2 210 75.7
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 1.0e-84 318.2 210 75.7
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 1.0e-84 318.2 210 75.7
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 1.0e-84 318.2 210 75.7
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 8.7e-84 315.1 210 74.3
Cpa.g.sc75.31 Carica papaya HOM05D003776 ORTHO05D004459 1.5e-80 304.3 175 85.1
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 7.2e-78 295.4 185 78.9
Ah.09g226230 Amaranthus hybridus HOM05D003776 ORTHO05D004459 2.5e-75 287.0 255 62.4
Psat0s3979g0040 Pisum sativum HOM05D003776 ORTHO05D004459 8.2e-74 282.0 210 68.1
Duzib187G1323 Durio zibethinus HOM05D003776 ORTHO05D004459 2.0e-72 277.3 173 80.3
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 7.7e-72 275.4 210 62.4
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 2.9e-71 273.5 165 80.6
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea HOM05D003776 ORTHO05D004459 8.8e-68 261.9 184 73.4
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 3.3e-67 260.0 189 69.8
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 3.3e-67 260.0 210 60.5
RcHm_v2.0_Chr2g0152361 Rosa chinensis HOM05D003776 ORTHO05D004459 5.5e-62 242.7 209 62.2
RcHm_v2.0_Chr2g0152391 Rosa chinensis HOM05D003776 ORTHO05D004459 5.5e-62 242.7 209 62.2
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 9.4e-62 241.9 213 57.3
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 2.6e-59 233.8 210 56.7
SEGI_34338 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 2.2e-55 220.7 168 61.9
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 5.2e-52 209.5 122 81.1
FvH4_6g38790 Fragaria vesca HOM05D003776 ORTHO05D004459 6.3e-50 202.6 185 58.9
Pp3c23_3420 Physcomitrium patens HOM05D003776 ORTHO05D004459 2.4e-49 200.7 200 50.0
Pp3c20_13260 Physcomitrium patens HOM05D003776 ORTHO05D004459 4.7e-45 186.4 244 44.3
Psat0s1308g0040 Pisum sativum HOM05D002636 ORTHO05D004459 4.1e-41 173.3 121 76.0
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 1.7e-39 167.9 226 42.9
Psat5g250280 Pisum sativum HOM05D003776 ORTHO05D004459 5.4e-33 146.4 132 61.4
ECA246G1679 Erigeron canadensis HOM05D003776 ORTHO05D004459 5.8e-27 126.3 147 51.7
Peaxi162Scf00574g00927 Petunia axillaris HOM05D003776 ORTHO05D004459 9.2e-25 119.0 75 81.3
HPP92_008667 Vanilla planifolia HOM05D003776 ORTHO05D004459 8.6e-15 85.9 157 40.8
CAN.G1024.1 Capsicum annuum HOM05D003776 ORTHO05D002238 1.1e-12 79.0 89 55.1
PSO478G0731 Papaver somniferum HOM05D003776 ORTHO05D004459 4.0e-12 77.0 74 62.2
MCO11G810 Micromonas commoda HOM05D003776 ORTHO05D004459 8.9e-12 75.9 156 34.6
CAN.G1616.4 Capsicum annuum HOM05D003776 ORTHO05D004459 2.9e-10 70.9 52 75.0
SEGI_04425 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 1.4e-09 68.6 63 52.4
Sed0006485 Sechium edule HOM05D003776 ORTHO05D004459 1.2e-08 65.5 49 73.5
SEGI_27908 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 7.8e-08 62.8 43 65.1
Psat6g208560 Pisum sativum HOM05D003776 ORTHO05D004459 5.6e-06 56.6 59 55.9


User provided reference genes

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