Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27545 Corylus avellana HOM05D003573 ORTHO05D004204 1.1e-119 433.3 217 100.0
Os01g0331900 Oryza sativa ssp. japonica HOM05D003573 ORTHO05D004204 1.8e-21 107.1 162 37.7
Lalb_Chr15g0077691 Lupinus albus HOM05D003573 ORTHO05D004204 1.5e-20 104.0 171 36.3
Manes.09G178900 Manihot esculenta HOM05D003573 ORTHO05D004204 1.5e-20 104.0 154 40.3
Os05g0159100 Oryza sativa ssp. japonica HOM05D003573 ORTHO05D004204 1.5e-20 104.0 175 37.7
Pp3c4_27310 Physcomitrium patens HOM05D003573 ORTHO05D004204 1.9e-20 103.6 156 36.5
CiPaw.08G154000 Carya illinoinensis HOM05D003573 ORTHO05D004204 2.5e-20 103.2 156 37.2
Glyma.10G145400 Glycine max HOM05D003573 ORTHO05D004204 4.3e-20 102.4 156 39.1
Lj5g0026100 Lotus japonicus HOM05D003573 ORTHO05D004204 5.7e-20 102.1 156 38.5
unitig_52.g17271 Utricularia gibba HOM05D003573 ORTHO05D004204 5.7e-20 102.1 158 35.4
Cfa006712 Carpinus fangiana HOM05D000740 ORTHO05D007141 7.4e-20 101.7 151 37.7
CDE08G1606 Ceratophyllum demersum HOM05D003573 ORTHO05D004204 7.4e-20 101.7 156 37.2
DCAR_025293 Daucus carota HOM05D003573 ORTHO05D004204 7.4e-20 101.7 157 36.9
Glyma.20G094600 Glycine max HOM05D003573 ORTHO05D004204 7.4e-20 101.7 156 38.5
Lalb_Chr18g0046131 Lupinus albus HOM05D003573 ORTHO05D004204 9.7e-20 101.3 156 37.8
Rhsim11G0098600 Rhododendron simsii HOM05D003573 ORTHO05D004204 9.7e-20 101.3 154 37.0
ATR0693G142 Amborella trichopoda HOM05D003573 ORTHO05D004204 1.3e-19 100.9 156 37.8
MSTRG.27926 Avicennia marina HOM05D003573 ORTHO05D004204 1.3e-19 100.9 158 35.4
CSS0015989 Camellia sinensis var. sinensis HOM05D003573 ORTHO05D004204 1.3e-19 100.9 156 37.2
Gohir.A08G120700 Gossypium hirsutum HOM05D003573 ORTHO05D004204 1.3e-19 100.9 159 35.8
MBI19_g32688_MAGBIO Magnolia biondii HOM05D003573 ORTHO05D004204 1.3e-19 100.9 169 34.9
CDE02G0220 Ceratophyllum demersum HOM05D003573 ORTHO05D004204 1.6e-19 100.5 156 37.2
Eucgr.L00252 Eucalyptus grandis HOM05D003573 ORTHO05D004204 1.6e-19 100.5 156 36.5
Medtr1g084620 Medicago truncatula HOM05D003573 ORTHO05D004204 1.6e-19 100.5 156 36.5
vmacro01587 Vaccinium macrocarpon HOM05D003573 ORTHO05D004204 1.6e-19 100.5 154 36.4
Zm00001eb131160 Zea mays HOM05D003573 ORTHO05D004204 1.6e-19 100.5 165 35.8
Cc02_g35110 Coffea canephora HOM05D003573 ORTHO05D004204 2.2e-19 100.1 156 37.2
Dinv24480 Davidia involucrata HOM05D003573 ORTHO05D004204 2.2e-19 100.1 156 36.5
QL03p017101 Quercus lobata HOM05D003573 ORTHO05D004204 2.2e-19 100.1 156 35.3
QL03p017386 Quercus lobata HOM05D003573 ORTHO05D004204 2.2e-19 100.1 156 35.3
Gorai.004G145900 Gossypium raimondii HOM05D003573 ORTHO05D004204 2.8e-19 99.8 157 36.3
Mapoly0097s0058 Marchantia polymorpha HOM05D003573 ORTHO05D004204 2.8e-19 99.8 158 34.8
Phvul.007G203300 Phaseolus vulgaris HOM05D003573 ORTHO05D004204 2.8e-19 99.8 156 37.8
Pp3c26_11230 Physcomitrium patens HOM05D003573 ORTHO05D004204 2.8e-19 99.8 151 36.4
Psat6g153480 Pisum sativum HOM05D003573 ORTHO05D004204 2.8e-19 99.8 151 38.4
TPR.G2625 Trifolium pratense HOM05D003573 ORTHO05D004204 2.8e-19 99.8 156 37.2
CAN.G65.170 Capsicum annuum HOM05D003573 ORTHO05D004204 3.7e-19 99.4 154 37.0
Manes.01G231400 Manihot esculenta HOM05D003573 ORTHO05D004204 3.7e-19 99.4 171 35.1
Peaxi162Scf00071g00032 Petunia axillaris HOM05D003573 ORTHO05D004204 3.7e-19 99.4 154 36.4
Peaxi162Scf00413g00825 Petunia axillaris HOM05D003573 ORTHO05D004204 3.7e-19 99.4 154 36.4
Sed0009799 Sechium edule HOM05D003573 ORTHO05D004204 3.7e-19 99.4 156 36.5
HPP92_026146 Vanilla planifolia HOM05D003573 ORTHO05D004204 3.7e-19 99.4 156 35.9
Atru.chr2.232 Acer truncatum HOM05D003573 ORTHO05D004204 4.8e-19 99.0 156 36.5
FAN13G0155 Fragaria x ananassa HOM05D003573 ORTHO05D004204 4.8e-19 99.0 158 36.7
SalBow7G0068 Salvia bowleyana HOM05D003573 ORTHO05D004204 4.8e-19 99.0 158 35.4
AagrBONN_evm.TU.Sc2ySwM_228.2372 Anthoceros agrestis HOM05D003573 ORTHO05D004204 6.3e-19 98.6 170 33.5
Glyma.19G227600 Glycine max HOM05D003573 ORTHO05D004204 6.3e-19 98.6 156 35.3
Nitab4.5_0011160g0010 Nicotiana tabacum HOM05D003573 ORTHO05D004204 6.3e-19 98.6 154 36.4
VMungo0720G1255 Vigna mungo HOM05D003573 ORTHO05D004204 6.3e-19 98.6 156 36.5
Aqoxy5G02735 Aquilegia oxysepala HOM05D003573 ORTHO05D004204 8.2e-19 98.2 156 35.9
CiPaw.07G031700 Carya illinoinensis HOM05D003573 ORTHO05D004204 8.2e-19 98.2 156 35.3
Solyc06g073270.4 Solanum lycopersicum HOM05D003573 ORTHO05D004204 8.2e-19 98.2 154 36.4
Sopen06g029630 Solanum pennellii HOM05D003573 ORTHO05D004204 8.2e-19 98.2 154 36.4
VMungo1383G3296 Vigna mungo HOM05D003573 ORTHO05D004204 8.2e-19 98.2 151 37.1
Actinidia16882 Actinidia chinensis HOM05D003573 ORTHO05D004204 1.1e-18 97.8 156 35.3
Ca_10187_v3 Cicer arietinum L. HOM05D003573 ORTHO05D004204 1.1e-18 97.8 156 35.9
FvH4_5g30460 Fragaria vesca HOM05D003573 ORTHO05D004204 1.1e-18 97.8 158 36.7
FAN08G3373 Fragaria x ananassa HOM05D003573 ORTHO05D004204 1.1e-18 97.8 158 36.7
FAN18G4422 Fragaria x ananassa HOM05D003573 ORTHO05D004204 1.1e-18 97.8 158 36.7
Lj5A325T70 Lonicera japonica HOM05D003573 ORTHO05D004204 1.1e-18 97.8 156 36.5
MBI18_g27390_MAGBIO Magnolia biondii HOM05D003573 ORTHO05D004204 1.1e-18 97.8 185 34.1
Nitab4.5_0002084g0030 Nicotiana tabacum HOM05D003573 ORTHO05D004204 1.1e-18 97.8 154 36.4
HanXRQChr09g0247451 Helianthus annuus HOM05D003573 ORTHO05D004204 1.4e-18 97.4 156 36.5
Oeu016563.1 Olea europaea HOM05D003573 ORTHO05D004204 1.4e-18 97.4 156 35.9
Phvul.001G223900 Phaseolus vulgaris HOM05D003573 ORTHO05D004204 1.4e-18 97.4 156 36.5
Potri.005G010400 Populus trichocarpa HOM05D003573 ORTHO05D004204 1.4e-18 97.4 156 36.5
Sed0009739 Sechium edule HOM05D003573 ORTHO05D004204 1.4e-18 97.4 156 35.3
SMO117G0341 Selaginella moellendorffii HOM05D003573 ORTHO05D004204 1.4e-18 97.4 152 36.2
Hund07300 Selenicereus undatus HOM05D003573 ORTHO05D004204 1.4e-18 97.4 156 37.2
C05p07320 Brassica napus HOM05D003573 ORTHO05D004204 1.8e-18 97.1 181 33.1
Nn4g25452 Nelumbo nucifera HOM05D003573 ORTHO05D004204 1.8e-18 97.1 156 35.3
PSO210G4149 Papaver somniferum HOM05D003573 ORTHO05D004204 1.8e-18 97.1 151 36.4
PGSC0003DMG400026912 Solanum tuberosum HOM05D003573 ORTHO05D004204 1.8e-18 97.1 154 35.7
GSVIVG01031271001 Vitis vinifera HOM05D003573 ORTHO05D004204 1.8e-18 97.1 156 37.2
Aa31LG1G5790 Aethionema arabicum HOM05D003573 ORTHO05D004204 2.4e-18 96.7 156 35.9
ECA240G4779 Erigeron canadensis HOM05D003573 ORTHO05D004204 2.4e-18 96.7 156 36.5
HanXRQChr09g0247491 Helianthus annuus HOM05D003573 ORTHO05D004204 2.4e-18 96.7 156 35.9
Hund21860 Selenicereus undatus HOM05D003573 ORTHO05D004204 2.4e-18 96.7 162 34.0
MSTRG.5152 Avicennia marina HOM05D003573 ORTHO05D004204 3.1e-18 96.3 158 34.8
AUR62006775 Chenopodium quinoa HOM05D003573 ORTHO05D004204 3.1e-18 96.3 162 34.0
Duzib177G0300 Durio zibethinus HOM05D003573 ORTHO05D004204 3.1e-18 96.3 171 34.5
Migut.N00950 Erythranthe guttata HOM05D003573 ORTHO05D004204 3.1e-18 96.3 156 35.3
FAN04G0689 Fragaria x ananassa HOM05D003573 ORTHO05D004204 3.1e-18 96.3 158 36.1
MD15G1312600 Malus domestica HOM05D003573 ORTHO05D004204 3.1e-18 96.3 158 36.1
Peaxi162Scf00126g00120 Petunia axillaris HOM05D003573 ORTHO05D004204 3.1e-18 96.3 156 34.6
arahy.Tifrunner.gnm1.ann1.QQCP7Q Arachis hypogaea HOM05D003573 ORTHO05D004204 4.1e-18 95.9 156 35.3
Cpa.g.sc48.189 Carica papaya HOM05D003573 ORTHO05D004204 4.1e-18 95.9 156 35.9
Lsat_1_v5_gn_7_65220 Lactuca sativa HOM05D003573 ORTHO05D004204 4.1e-18 95.9 156 36.5
MD01G1039100 Malus domestica HOM05D003573 ORTHO05D004204 4.1e-18 95.9 158 36.1
Mapoly0126s0022 Marchantia polymorpha HOM05D003573 ORTHO05D004204 4.1e-18 95.9 160 34.4
AL1G19820 Arabidopsis lyrata HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 35.9
AT1G09330 Arabidopsis thaliana HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 35.9
arahy.Tifrunner.gnm1.ann1.F3ZWVX Arachis hypogaea HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 35.3
ClCG01G010840 Citrullus lanatus HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 34.6
MELO3C008924.2 Cucumis melo HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 34.6
CsaV3_4G030590 Cucumis sativus L. HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 34.6
Duzib138G0643 Durio zibethinus HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 34.6
Manes.08G109500 Manihot esculenta HOM05D003573 ORTHO05D004204 5.3e-18 95.5 171 34.5
Oeu013204.1 Olea europaea HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 35.3
Prupe.1G561100 Prunus persica HOM05D003573 ORTHO05D004204 5.3e-18 95.5 158 35.4
Sp1g07940 Schrenkiella parvula HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 35.9
SGA_v2.0_scaffold4G01981 Striga asiatica HOM05D003573 ORTHO05D004204 5.3e-18 95.5 156 34.6
Ciclev10002622m.g Citrus clementina HOM05D003573 ORTHO05D004204 6.9e-18 95.1 156 35.9
PGR083G1465 Punica granatum HOM05D003573 ORTHO05D004204 6.9e-18 95.1 157 35.0
RcHm_v2.0_Chr7g0224911 Rosa chinensis HOM05D003573 ORTHO05D004204 6.9e-18 95.1 158 35.4
TWI56G0836 Tripterygium wilfordii HOM05D003573 ORTHO05D004204 6.9e-18 95.1 156 35.3
TAR362G0946 Trochodendron aralioides HOM05D003573 ORTHO05D004204 6.9e-18 95.1 156 35.3
CSS0016641 Camellia sinensis var. sinensis HOM05D003573 ORTHO05D004204 9.1e-18 94.7 156 35.9
CANSAT54G2769 Cannabis sativa HOM05D003573 ORTHO05D004204 9.1e-18 94.7 156 35.9
CiPaw.08G086400 Carya illinoinensis HOM05D003573 ORTHO05D004204 9.1e-18 94.7 156 34.0
Thhalv10010041m.g Eutrema salsugineum HOM05D003573 ORTHO05D004204 9.1e-18 94.7 156 35.3
BcaC07g41888 Brassica carinata HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
BcaC07g41891 Brassica carinata HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
BcaC07g41893 Brassica carinata HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
BcaC07g41897 Brassica carinata HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
A08p34670 Brassica napus HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
C08p49520 Brassica napus HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
BolC8t52489H Brassica oleracea HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
BraA08t35375Z Brassica rapa HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
BraA08t35379Z Brassica rapa HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
Carub.0001s0867 Capsella rubella HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
TWI12G1010 Tripterygium wilfordii HOM05D003573 ORTHO05D004204 1.2e-17 94.4 156 35.3
Duzib106G1676 Durio zibethinus HOM05D003573 ORTHO05D004204 1.5e-17 94.0 171 34.5
THA.LOC104820547 Tarenaya hassleriana HOM05D003573 ORTHO05D004204 1.5e-17 94.0 156 34.6
BcaB03g13285 Brassica carinata HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 35.3
BcaC05g24787 Brassica carinata HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 35.3
BcaC07g38492 Brassica carinata HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 35.3
C08p12620 Brassica napus HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 35.3
BolC5t29490H Brassica oleracea HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 35.3
BolC8t48900H Brassica oleracea HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 35.3
CARHR009300 Cardamine hirsuta HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 35.3
QL12p018683 Quercus lobata HOM05D003573 ORTHO05D004204 2.0e-17 93.6 156 34.0
COL.COLO4_05522 Corchorus olitorius HOM05D000740 ORTHO05D007141 2.6e-17 93.2 151 35.1
Potri.013G006250 Populus trichocarpa HOM05D003573 ORTHO05D004204 2.6e-17 93.2 162 34.6
SEGI_36437 Sequoiadendron giganteum HOM05D003573 ORTHO05D004204 2.6e-17 93.2 158 34.2
arahy.Tifrunner.gnm1.ann1.1SW4RN Arachis hypogaea HOM05D003573 ORTHO05D004204 3.4e-17 92.8 157 34.4
BraA06t23816Z Brassica rapa HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 35.3
Gohir.A11G274600 Gossypium hirsutum HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 34.0
Gohir.D11G284800 Gossypium hirsutum HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 34.0
Gorai.007G308200 Gossypium raimondii HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 34.0
Nn8g40288 Nelumbo nucifera HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 35.3
SGA_v2.0_scaffold37G14585 Striga asiatica HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 33.3
THA.LOC104816856 Tarenaya hassleriana HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 35.3
GSVIVG01028173001 Vitis vinifera HOM05D003573 ORTHO05D004204 3.4e-17 92.8 156 34.6
BcaB07g34129 Brassica carinata HOM05D003573 ORTHO05D004204 4.5e-17 92.4 156 35.3
Thecc.05G326000 Theobroma cacao HOM05D003573 ORTHO05D004204 4.5e-17 92.4 171 33.9
A06p06050 Brassica napus HOM05D003573 ORTHO05D004204 5.9e-17 92.0 156 35.3
Oeu000076.1 Olea europaea HOM05D003573 ORTHO05D004204 5.9e-17 92.0 156 33.3
Zm00001eb353840 Zea mays HOM05D003573 ORTHO05D004204 5.9e-17 92.0 151 37.1
CBR_g21298 Chara braunii HOM05D003573 ORTHO05D004204 7.7e-17 91.7 156 37.2
Hma1.2p1_0052F.1_g030630 Hydrangea macrophylla HOM05D003573 ORTHO05D004204 7.7e-17 91.7 156 33.3
PSO724G0869 Papaver somniferum HOM05D003573 ORTHO05D004204 7.7e-17 91.7 156 34.6
Duzib133G0299 Durio zibethinus HOM05D003573 ORTHO05D004204 1.0e-16 91.3 154 35.1
Hma1.2p1_0052F.1_g030655 Hydrangea macrophylla HOM05D003573 ORTHO05D004204 1.0e-16 91.3 151 33.8
PSO729G0111 Papaver somniferum HOM05D003573 ORTHO05D004204 1.3e-16 90.9 156 34.6
CBR_g30020 Chara braunii HOM05D003573 ORTHO05D004204 2.9e-16 89.7 156 35.9
Aa31LG1G28500 Aethionema arabicum HOM05D003573 ORTHO05D004204 3.8e-16 89.4 156 31.4
Haze_05090 Corylus avellana HOM05D003573 ORTHO05D004204 1.1e-15 87.8 156 32.1
PRCOL_00002267 Prasinoderma coloniale HOM05D003573 ORTHO05D004204 1.4e-15 87.4 168 33.9
Haze_04050 Corylus avellana HOM05D003573 ORTHO05D004204 1.9e-15 87.0 156 34.6
EL10Ac4g09504 Beta vulgaris HOM05D003573 ORTHO05D004204 4.6e-14 82.4 134 35.8
Gohir.D08G141501 Gossypium hirsutum HOM05D003573 ORTHO05D004204 4.6e-14 82.4 125 37.6
Lju99C11G5 Lonicera japonica HOM05D003573 ORTHO05D004204 4.6e-14 82.4 142 35.9
Sc09g0002560 Simmondsia chinensis HOM05D003573 ORTHO05D004204 4.6e-14 82.4 129 37.2
Sabra05G0007600 Salix brachista HOM05D003573 ORTHO05D004204 6.1e-14 82.0 134 36.6
vmacro19778 Vaccinium macrocarpon HOM05D003573 ORTHO05D004204 2.3e-13 80.1 154 33.1
Oeu019843.1 Olea europaea HOM05D003573 ORTHO05D004204 3.0e-13 79.7 124 36.3
Duzib128G0433 Durio zibethinus HOM05D003573 ORTHO05D004204 5.1e-13 79.0 134 35.8
SGA_v2.0_scaffold87G26967 Striga asiatica HOM05D003573 ORTHO05D004204 5.1e-13 79.0 124 35.5
TAR636G1598 Trochodendron aralioides HOM05D003573 ORTHO05D004204 5.1e-13 79.0 134 35.1
AUR62000429 Chenopodium quinoa HOM05D003573 ORTHO05D004204 6.7e-13 78.6 129 35.7
Sabra13G0005400 Salix brachista HOM05D000740 ORTHO05D007141 7.4e-12 75.1 129 34.9
Cpa.g.sc145.22 Carica papaya HOM05D003573 ORTHO05D004204 9.7e-12 74.7 111 36.0
Hma1.2p1_0008F-1.1_g005370 Hydrangea macrophylla HOM05D003573 ORTHO05D004204 3.7e-11 72.8 191 28.8
arahy.Tifrunner.gnm1.ann1.EG7X7D Arachis hypogaea HOM05D003573 ORTHO05D004204 6.3e-11 72.0 160 30.6
MCO08G141 Micromonas commoda HOM05D003573 ORTHO05D004204 8.2e-11 71.6 147 32.0
Pp3c26_12900 Physcomitrium patens HOM05D003573 ORTHO05D004204 1.1e-10 71.2 95 36.8
Cre16.g683250 Chlamydomonas reinhardtii HOM05D003573 ORTHO05D004204 4.1e-10 69.3 161 29.8
Dinv30916 Davidia involucrata HOM05D003573 ORTHO05D004204 2.2e-08 63.5 103 35.9
TAR633G0103 Trochodendron aralioides HOM05D003573 ORTHO05D004204 1.4e-07 60.8 106 34.0
Dinv12111 Davidia involucrata HOM05D003573 ORTHO05D004204 4.2e-07 59.3 100 33.0
Rhsim05G0129200 Rhododendron simsii HOM05D003573 ORTHO05D004204 6.1e-06 55.5 136 30.1


User provided reference genes

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