Gene: COL.COLO4_05522

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05522
  • Transcript Identifier COL.rna4343
  • Gene Type Coding gene
  • Location AWUE01012366.1 : 117271-122206 : positive

Gene Family Information

  • ID HOM05D000740
  • #Genes/#Species 788/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4343
  • GenBank OMP09409.1
  • id gene5494
  • gene_name COLO4_05522
  • uniprot A0A1R3KQT3

Descriptions

  • Description Clathrin adaptor, mu subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT1G56590
GO:0006623
ISO
PLAZA Integrative Orthologyprotein targeting to vacuole AT1G56590

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G56590

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016021
IEA
InterProintegral component of membrane
GO:0030131
IEA
GOA Databaseclathrin adaptor complex
GO:0030131
IEA
InterProclathrin adaptor complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001392 Clathrin adaptor, mu subunit
IPR011012 Longin-like domain superfamily
IPR036168 AP-2 complex subunit mu, C-terminal superfamily
IPR028565 Mu homology domain
IPR008564 Golgi apparatus membrane protein TVP23-like
Mapman id Description
22.3.1.4.3 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-3 cargo adaptor complex.medium subunit mu (AP3M)
22.5.3.2.1 Vesicle trafficking.exocytic trafficking.secretory vesicle trafficking.ECHIDNA-YIP trafficking complex.component ECHIDNA