Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 1.1e-126 456.8 260 100.0
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.0e-55 221.1 184 57.6
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.0e-55 221.1 184 57.6
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 1.3e-55 220.7 184 57.6
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 1.7e-55 220.3 184 57.6
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 2.9e-55 219.5 184 57.1
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 2.9e-55 219.5 184 57.1
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 5.0e-55 218.8 184 57.6
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 5.0e-55 218.8 184 54.9
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 6.5e-55 218.4 184 56.5
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 6.5e-55 218.4 184 56.5
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 6.5e-55 218.4 184 57.1
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 1.1e-54 217.6 184 57.1
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 1.1e-54 217.6 184 54.9
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 1.1e-54 217.6 184 57.6
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 56.5
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 57.6
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 57.6
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 57.6
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 57.6
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 56.0
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 56.0
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.9e-54 216.9 184 56.0
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 2.5e-54 216.5 184 56.5
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 2.5e-54 216.5 184 56.0
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 4.2e-54 215.7 184 56.5
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 4.2e-54 215.7 184 56.5
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 4.2e-54 215.7 184 54.9
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 4.2e-54 215.7 184 54.9
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 5.5e-54 215.3 184 56.0
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 5.5e-54 215.3 184 54.9
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 5.5e-54 215.3 184 57.1
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 5.5e-54 215.3 184 55.4
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 7.2e-54 214.9 184 54.9
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 7.2e-54 214.9 184 56.0
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 7.2e-54 214.9 184 54.9
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 7.2e-54 214.9 184 55.4
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 7.2e-54 214.9 184 56.0
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 9.4e-54 214.5 184 56.0
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 9.4e-54 214.5 184 55.4
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 9.4e-54 214.5 184 54.9
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 9.4e-54 214.5 184 54.9
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 9.4e-54 214.5 213 50.2
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 9.4e-54 214.5 213 50.2
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 9.4e-54 214.5 184 54.9
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 9.4e-54 214.5 184 56.5
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 1.2e-53 214.2 184 56.0
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 1.2e-53 214.2 184 54.9
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 1.2e-53 214.2 184 54.9
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.2e-53 214.2 184 56.0
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 1.6e-53 213.8 184 54.9
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 1.6e-53 213.8 184 55.4
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.6e-53 213.8 184 56.0
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 1.6e-53 213.8 184 56.5
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 1.6e-53 213.8 184 56.0
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 2.1e-53 213.4 184 55.4
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 2.1e-53 213.4 184 55.4
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.7e-53 213.0 184 55.4
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.7e-53 213.0 184 55.4
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 2.7e-53 213.0 184 57.1
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 2.7e-53 213.0 184 54.9
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 3.6e-53 212.6 184 55.4
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 3.6e-53 212.6 184 54.9
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 4.7e-53 212.2 184 54.3
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 4.7e-53 212.2 184 54.9
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 6.1e-53 211.8 184 54.9
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 6.1e-53 211.8 184 54.9
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 6.1e-53 211.8 184 54.9
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 6.1e-53 211.8 184 55.4
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 7.9e-53 211.5 184 55.4
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 7.9e-53 211.5 214 48.6
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 7.9e-53 211.5 184 54.9
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 7.9e-53 211.5 184 54.9
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 7.9e-53 211.5 184 54.9
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 1.0e-52 211.1 184 55.4
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 1.4e-52 210.7 184 53.8
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 1.4e-52 210.7 184 54.9
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 1.8e-52 210.3 184 54.9
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 1.8e-52 210.3 184 54.9
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 1.8e-52 210.3 184 53.8
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 2.3e-52 209.9 213 49.3
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.3e-52 209.9 167 58.1
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 2.3e-52 209.9 184 53.8
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 3.0e-52 209.5 184 53.8
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 3.0e-52 209.5 184 53.8
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 3.0e-52 209.5 184 53.8
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 3.0e-52 209.5 184 53.8
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 3.9e-52 209.1 184 54.9
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 5.2e-52 208.8 184 53.8
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 5.2e-52 208.8 184 54.9
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 2.0e-51 206.8 184 53.3
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 2.0e-51 206.8 184 53.3
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 2.0e-51 206.8 214 48.6
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 2.6e-51 206.5 184 53.3
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 2.6e-51 206.5 184 53.3
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 2.6e-51 206.5 167 58.1
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 3.3e-51 206.1 184 52.7
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 3.3e-51 206.1 172 54.7
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 4.4e-51 205.7 184 53.3
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 4.4e-51 205.7 184 52.7
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 5.7e-51 205.3 184 53.8
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 7.4e-51 204.9 184 54.3
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.8e-50 203.0 198 50.5
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 2.8e-50 203.0 202 50.5
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 4.8e-50 202.2 171 54.4
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 6.3e-50 201.8 184 52.2
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 2.4e-49 199.9 191 51.3
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 4.1e-49 199.1 192 48.4
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 4.5e-48 195.7 184 53.3
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 1.7e-47 193.7 205 47.3
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 5.0e-47 192.2 201 48.3
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 6.5e-47 191.8 213 46.0
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 1.9e-46 190.3 220 44.5
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 2.5e-46 189.9 167 53.9
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 1.6e-45 187.2 236 43.2
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 1.8e-44 183.7 184 48.4
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 1.8e-41 173.7 262 40.5
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 7.0e-41 171.8 149 54.4
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 2.2e-39 166.8 149 53.0
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 6.1e-37 158.7 187 44.9
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 4.0e-36 156.0 184 46.7
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 2.8e-29 133.3 99 58.6
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 4.4e-27 125.9 89 58.4
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 3.8e-23 112.8 146 43.8
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 1.1e-14 84.7 89 49.4
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 1.9e-14 84.0 88 50.0
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 4.4e-11 72.8 68 51.5
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 4.4e-11 72.8 68 51.5
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 9.8e-11 71.6 90 43.3
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 1.9e-09 67.4 53 49.1


User provided reference genes

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