Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_27315 Corylus avellana HOM05D004753 ORTHO05D005920 4.5e-172 607.8 306 100.0
Eucgr.K03479 Eucalyptus grandis HOM05D004753 ORTHO05D005920 3.2e-45 186.4 291 38.8
MSTRG.18152 Avicennia marina HOM05D004753 ORTHO05D005920 4.2e-45 186.0 288 39.6
PGR044G2668 Punica granatum HOM05D004753 ORTHO05D005920 9.4e-45 184.9 291 38.8
SalBow3G1002 Salvia bowleyana HOM05D004753 ORTHO05D005920 9.4e-45 184.9 288 38.9
GSVIVG01028012001 Vitis vinifera HOM05D004753 ORTHO05D005920 9.4e-45 184.9 291 37.8
Cc09_g07750 Coffea canephora HOM05D004753 ORTHO05D005920 3.6e-44 183.0 317 36.9
Sabra02G0154600 Salix brachista HOM05D004753 ORTHO05D005920 6.1e-44 182.2 291 37.8
MBI18_g06877_MAGBIO Magnolia biondii HOM05D004753 ORTHO05D005920 7.9e-44 181.8 286 39.5
CSS0011058 Camellia sinensis var. sinensis HOM05D004753 ORTHO05D005920 1.0e-43 181.4 291 37.8
Haze_04935 Corylus avellana HOM05D004753 ORTHO05D005920 1.0e-43 181.4 290 38.3
Potri.014G129700 Populus trichocarpa HOM05D004753 ORTHO05D005920 1.0e-43 181.4 291 38.1
TWI59G0801 Tripterygium wilfordii HOM05D004753 ORTHO05D005920 1.0e-43 181.4 291 38.5
Haze_24929 Corylus avellana HOM05D004753 ORTHO05D005920 1.4e-43 181.0 290 38.3
MD11G1310300 Malus domestica HOM05D004753 ORTHO05D005920 1.4e-43 181.0 291 37.8
QL12p028506 Quercus lobata HOM05D004753 ORTHO05D005920 1.8e-43 180.6 290 38.3
MD03G1288000 Malus domestica HOM05D004753 ORTHO05D005920 2.3e-43 180.3 291 37.8
Manes.01G218800 Manihot esculenta HOM05D004753 ORTHO05D005920 2.3e-43 180.3 292 37.7
Oeu011458.1 Olea europaea HOM05D004753 ORTHO05D005920 2.3e-43 180.3 291 37.5
Peaxi162Scf01084g00120 Petunia axillaris HOM05D004753 ORTHO05D005920 2.3e-43 180.3 291 37.8
Atru.chr5.901 Acer truncatum HOM05D004753 ORTHO05D005920 3.0e-43 179.9 291 38.1
PSO170G0569 Papaver somniferum HOM05D004753 ORTHO05D005920 3.0e-43 179.9 290 36.6
CiPaw.14G100000 Carya illinoinensis HOM05D004753 ORTHO05D005920 3.9e-43 179.5 290 37.9
Sabra14G0096300 Salix brachista HOM05D004753 ORTHO05D005920 3.9e-43 179.5 291 37.8
Aqoxy2G02947 Aquilegia oxysepala HOM05D004753 ORTHO05D005920 5.1e-43 179.1 291 38.1
CANSAT54G1658 Cannabis sativa HOM05D004753 ORTHO05D005920 6.7e-43 178.7 291 38.1
Lj3g0027269 Lotus japonicus HOM05D004753 ORTHO05D005920 6.7e-43 178.7 310 36.8
PSO017G3074 Papaver somniferum HOM05D004753 ORTHO05D005920 6.7e-43 178.7 291 36.8
AagrBONN_evm.TU.Sc2ySwM_362.2675 Anthoceros agrestis HOM05D004753 ORTHO05D005920 1.1e-42 177.9 315 36.5
HanXRQChr08g0207921 Helianthus annuus HOM05D004753 ORTHO05D005920 1.1e-42 177.9 288 36.8
Potri.002G204900 Populus trichocarpa HOM05D004753 ORTHO05D005920 1.1e-42 177.9 291 36.8
THA.LOC104818291 Tarenaya hassleriana HOM05D004753 ORTHO05D005920 1.1e-42 177.9 319 36.7
Ca_19020_v3 Cicer arietinum L. HOM05D004753 ORTHO05D005920 2.0e-42 177.2 311 37.0
Ciclev10023300m.g Citrus clementina HOM05D004753 ORTHO05D005920 2.6e-42 176.8 291 38.1
Oeu046682.2 Olea europaea HOM05D004753 ORTHO05D005920 2.6e-42 176.8 291 37.1
TAR636G3371 Trochodendron aralioides HOM05D004753 ORTHO05D005920 2.6e-42 176.8 290 37.2
vmacro15009 Vaccinium macrocarpon HOM05D004753 ORTHO05D005920 2.6e-42 176.8 315 36.8
COL.COLO4_23348 Corchorus olitorius HOM05D004753 ORTHO05D005920 3.3e-42 176.4 313 35.5
MELO3C017956.2 Cucumis melo HOM05D004753 ORTHO05D005920 3.3e-42 176.4 315 36.8
PSO832G3876 Papaver somniferum HOM05D004753 ORTHO05D005920 3.3e-42 176.4 290 36.2
Hund05425 Selenicereus undatus HOM05D004753 ORTHO05D005920 3.3e-42 176.4 295 36.6
Lj2A1194G52 Lonicera japonica HOM05D004753 ORTHO05D005920 4.4e-42 176.0 288 36.1
Nn3g21484 Nelumbo nucifera HOM05D004753 ORTHO05D005920 4.4e-42 176.0 313 37.4
Glyma.12G026700 Glycine max HOM05D004753 ORTHO05D005920 5.7e-42 175.6 298 36.2
Gohir.A08G117800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 5.7e-42 175.6 290 36.2
CsaV3_4G000800 Cucumis sativus L. HOM05D004753 ORTHO05D005920 7.4e-42 175.3 315 36.5
Lsat_1_v5_gn_4_87281 Lactuca sativa HOM05D004753 ORTHO05D005920 7.4e-42 175.3 316 36.4
PSO210G3006 Papaver somniferum HOM05D004753 ORTHO05D005920 7.4e-42 175.3 290 35.9
PGSC0003DMG401027528 Solanum tuberosum HOM05D004753 ORTHO05D005920 7.4e-42 175.3 286 37.1
SGA_v2.0_scaffold2G01394 Striga asiatica HOM05D004753 ORTHO05D005920 7.4e-42 175.3 288 36.8
Sed0000474 Sechium edule HOM05D004753 ORTHO05D005920 9.7e-42 174.9 290 36.9
ClCG10G010920 Citrullus lanatus HOM05D004753 ORTHO05D005920 1.7e-41 174.1 315 36.5
Aa31LG11G1720 Aethionema arabicum HOM05D004753 ORTHO05D005920 2.2e-41 173.7 317 35.3
Cpa.g.sc16.169 Carica papaya HOM05D004753 ORTHO05D005920 2.2e-41 173.7 291 36.8
ECA238G0492 Erigeron canadensis HOM05D004753 ORTHO05D005920 2.2e-41 173.7 286 36.7
Glyma.11G100700 Glycine max HOM05D004753 ORTHO05D005920 2.2e-41 173.7 298 36.6
Thecc.01G300100 Theobroma cacao HOM05D004753 ORTHO05D005920 2.2e-41 173.7 316 35.1
DCAR_012396 Daucus carota HOM05D004753 ORTHO05D005920 2.8e-41 173.3 289 36.7
Pp3c2_30030 Physcomitrium patens HOM05D004753 ORTHO05D005920 4.8e-41 172.6 286 37.1
QL09p032163 Quercus lobata HOM05D004753 ORTHO05D005920 4.8e-41 172.6 290 37.2
Solyc01g096800.3 Solanum lycopersicum HOM05D004753 ORTHO05D005920 4.8e-41 172.6 286 36.4
Mapoly0097s0041 Marchantia polymorpha HOM05D004753 ORTHO05D005920 6.3e-41 172.2 312 35.6
Phvul.011G029700 Phaseolus vulgaris HOM05D004753 ORTHO05D005920 6.3e-41 172.2 316 35.4
Sopen01g040500 Solanum pennellii HOM05D004753 ORTHO05D005920 8.2e-41 171.8 286 36.4
arahy.Tifrunner.gnm1.ann1.89EUFG Arachis hypogaea HOM05D004753 ORTHO05D005920 1.1e-40 171.4 298 35.6
Duzib133G0229 Durio zibethinus HOM05D004753 ORTHO05D005920 1.1e-40 171.4 315 34.9
HPP92_002997 Vanilla planifolia HOM05D004753 ORTHO05D005920 1.1e-40 171.4 287 36.2
CAN.G134.43 Capsicum annuum HOM05D004753 ORTHO05D005920 1.4e-40 171.0 288 36.5
arahy.Tifrunner.gnm1.ann1.B7L3V1 Arachis hypogaea HOM05D004753 ORTHO05D005920 1.8e-40 170.6 298 35.6
Duzib138G1754 Durio zibethinus HOM05D004753 ORTHO05D005920 1.8e-40 170.6 316 34.5
Gohir.D08G138800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.8e-40 170.6 315 35.2
ATR0584G246 Amborella trichopoda HOM05D004753 ORTHO05D005920 2.4e-40 170.2 318 34.6
Gorai.004G142400 Gossypium raimondii HOM05D004753 ORTHO05D005920 3.1e-40 169.9 315 35.2
TPR.G32348 Trifolium pratense HOM05D004753 ORTHO05D005920 3.1e-40 169.9 308 36.4
unitig_26.g10170 Utricularia gibba HOM05D004753 ORTHO05D005920 3.1e-40 169.9 270 38.5
Sp2g24970 Schrenkiella parvula HOM05D004753 ORTHO05D005920 4.1e-40 169.5 289 36.7
Thhalv10004503m.g Eutrema salsugineum HOM05D004753 ORTHO05D005920 5.3e-40 169.1 289 36.7
Nitab4.5_0002687g0080 Nicotiana tabacum HOM05D004753 ORTHO05D005920 5.3e-40 169.1 291 36.8
Nitab4.5_0008999g0010 Nicotiana tabacum HOM05D004753 ORTHO05D005920 5.3e-40 169.1 291 36.8
AUR62008626 Chenopodium quinoa HOM05D004753 ORTHO05D005920 7.0e-40 168.7 294 36.1
Rhsim01G0243400 Rhododendron simsii HOM05D004753 ORTHO05D005920 1.5e-39 167.5 310 35.2
VMungo1127G1640 Vigna mungo HOM05D004753 ORTHO05D005920 1.5e-39 167.5 315 34.6
Zm00001eb016460 Zea mays HOM05D004753 ORTHO05D005920 1.5e-39 167.5 291 34.0
BcaB02g09600 Brassica carinata HOM05D004753 ORTHO05D005920 2.0e-39 167.2 289 35.6
CARHR275530 Cardamine hirsuta HOM05D004753 ORTHO05D005920 2.0e-39 167.2 286 36.7
BcaC01g02428 Brassica carinata HOM05D004753 ORTHO05D005920 2.6e-39 166.8 289 35.6
A06p28420 Brassica napus HOM05D004753 ORTHO05D005920 2.6e-39 166.8 289 35.6
A09p07440 Brassica napus HOM05D004753 ORTHO05D005920 2.6e-39 166.8 289 35.3
C03p65390 Brassica napus HOM05D004753 ORTHO05D005920 2.6e-39 166.8 289 35.6
BolC3t18792H Brassica oleracea HOM05D004753 ORTHO05D005920 2.6e-39 166.8 289 35.6
BraA06t25786Z Brassica rapa HOM05D004753 ORTHO05D005920 2.6e-39 166.8 289 35.6
RcHm_v2.0_Chr6g0293981 Rosa chinensis HOM05D004753 ORTHO05D005920 2.6e-39 166.8 293 36.2
FvH4_2g25700 Fragaria vesca HOM05D004753 ORTHO05D005920 4.5e-39 166.0 293 36.9
FAN24G0086 Fragaria x ananassa HOM05D004753 ORTHO05D005920 4.5e-39 166.0 293 36.9
Lalb_Chr01g0001441 Lupinus albus HOM05D004753 ORTHO05D005920 4.5e-39 166.0 308 35.1
AL8G38530 Arabidopsis lyrata HOM05D004753 ORTHO05D005920 5.9e-39 165.6 286 36.7
FAN15G2487 Fragaria x ananassa HOM05D004753 ORTHO05D005920 5.9e-39 165.6 293 37.2
Sc17g0002740 Simmondsia chinensis HOM05D004753 ORTHO05D005920 5.9e-39 165.6 313 35.8
AT5G61770 Arabidopsis thaliana HOM05D004753 ORTHO05D005920 7.7e-39 165.2 286 36.4
Carub.0008s2246 Capsella rubella HOM05D004753 ORTHO05D005920 7.7e-39 165.2 286 36.7
FAN20G2170 Fragaria x ananassa HOM05D004753 ORTHO05D005920 1.0e-38 164.9 293 37.2
FAN27G0535 Fragaria x ananassa HOM05D004753 ORTHO05D005920 1.0e-38 164.9 293 37.2
MCO08G191 Micromonas commoda HOM05D004753 ORTHO05D005920 1.3e-38 164.5 314 31.8
SMO331G0088 Selaginella moellendorffii HOM05D004753 ORTHO05D005920 1.3e-38 164.5 295 36.6
SGA_v2.0_scaffold1G00368 Striga asiatica HOM05D004753 ORTHO05D005920 1.3e-38 164.5 313 34.2
BcaC04g23436 Brassica carinata HOM05D004753 ORTHO05D005920 2.9e-38 163.3 315 34.0
C09p08350 Brassica napus HOM05D004753 ORTHO05D005920 2.9e-38 163.3 315 34.0
BolC9t53745H Brassica oleracea HOM05D004753 ORTHO05D005920 2.9e-38 163.3 315 34.0
BraA09t36398Z Brassica rapa HOM05D004753 ORTHO05D005920 2.9e-38 163.3 315 34.0
Dinv37873 Davidia involucrata HOM05D004753 ORTHO05D005920 8.5e-38 161.8 264 36.7
Cre10.g450879 Chlamydomonas reinhardtii HOM05D004753 ORTHO05D005920 1.5e-37 161.0 311 34.4
HanXRQChr12g0368811 Helianthus annuus HOM05D004753 ORTHO05D005920 1.6e-36 157.5 277 35.0
Actinidia15830 Actinidia chinensis HOM05D004753 ORTHO05D005920 2.7e-36 156.8 292 35.3
AUR62033145 Chenopodium quinoa HOM05D004753 ORTHO05D005920 6.1e-36 155.6 316 33.2
BcaNung01420 Brassica carinata HOM05D004753 ORTHO05D005920 1.0e-35 154.8 292 33.6
Prupe.8G261200 Prunus persica HOM05D004753 ORTHO05D005920 2.0e-34 150.6 221 40.3
CBR_g227 Chara braunii HOM05D004753 ORTHO05D005920 2.6e-34 150.2 263 37.3
Os03g0343700 Oryza sativa ssp. japonica HOM05D004753 ORTHO05D005920 6.3e-33 145.6 290 32.1
TAR365G0243 Trochodendron aralioides HOM05D004753 ORTHO05D005920 8.2e-33 145.2 220 38.6
Aqoxy311s002 Aquilegia oxysepala HOM05D004753 ORTHO05D005920 4.1e-32 142.9 231 38.5
Ah.08g213470 Amaranthus hybridus HOM05D004753 ORTHO05D005920 2.6e-31 140.2 295 32.5
Psat7g177400 Pisum sativum HOM05D004753 ORTHO05D005920 1.0e-30 138.3 225 36.4
Ah.15g093220 Amaranthus hybridus HOM05D004753 ORTHO05D005920 1.1e-29 134.8 292 31.5
PRCOL_00006477 Prasinoderma coloniale HOM05D004753 ORTHO05D005920 4.2e-29 132.9 241 32.8
CDE09G1083 Ceratophyllum demersum HOM05D004753 ORTHO05D005920 2.7e-28 130.2 264 32.6
Medtr4g075050 Medicago truncatula HOM05D004753 ORTHO05D005920 3.6e-28 129.8 300 31.0
Actinidia01484 Actinidia chinensis HOM05D004753 ORTHO05D005920 3.4e-26 123.2 244 34.0
Gorai.002G117300 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.7e-25 120.9 283 31.8
Cfa026076 Carpinus fangiana HOM05D004753 ORTHO05D005920 1.3e-22 111.3 361 26.6
THA.LOC104801723 Tarenaya hassleriana HOM05D004753 ORTHO05D005920 1.7e-22 110.9 169 39.1
Actinidia32213 Actinidia chinensis HOM05D004753 ORTHO05D005920 3.0e-19 100.1 166 38.0
Gorai.012G092400 Gossypium raimondii HOM05D004753 ORTHO05D005920 3.4e-18 96.7 147 36.7
AUR62033152 Chenopodium quinoa HOM05D004753 ORTHO05D005920 2.3e-14 84.0 135 32.6
Migut.B01152 Erythranthe guttata HOM05D004753 ORTHO05D005920 5.2e-11 72.8 111 36.9
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 5.7e-10 69.3 77 40.3
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 7.5e-10 68.9 77 40.3
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 7.5e-10 68.9 77 40.3
Sed0023746 Sechium edule HOM05D004753 ORTHO05D005920 2.7e-07 60.5 271 23.6
Actinidia16175 Actinidia chinensis HOM05D004753 ORTHO05D005920 7.8e-07 58.9 78 44.9
arahy.Tifrunner.gnm1.ann1.81M7HI Arachis hypogaea HOM05D004753 ORTHO05D005920 1.3e-06 58.2 71 40.8


User provided reference genes

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