Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26904 Corylus avellana HOM05D005164 ORTHO05D006398 8.6e-117 423.7 219 100.0
CBR_g36268 Chara braunii HOM05D005164 ORTHO05D006398 2.8e-43 179.5 203 48.8
AagrBONN_evm.TU.Sc2ySwM_117.2514 Anthoceros agrestis HOM05D005164 ORTHO05D006398 3.7e-43 179.1 205 47.3
Mapoly0072s0034 Marchantia polymorpha HOM05D005164 ORTHO05D006398 1.4e-42 177.2 213 46.5
SMO364G0673 Selaginella moellendorffii HOM05D005164 ORTHO05D006398 5.3e-42 175.3 213 45.1
Pp3c5_28450 Physcomitrium patens HOM05D005164 ORTHO05D006398 6.9e-42 174.9 205 46.8
ECA247G1488 Erigeron canadensis HOM05D005164 ORTHO05D006398 3.4e-41 172.6 205 45.4
Os03g0197400 Oryza sativa ssp. japonica HOM05D005164 ORTHO05D006398 4.5e-41 172.2 207 45.4
Cfa018135 Carpinus fangiana HOM05D005164 ORTHO05D006398 1.7e-40 170.2 205 44.9
Haze_17990 Corylus avellana HOM05D005164 ORTHO05D006398 1.7e-40 170.2 205 44.9
QL02p007897 Quercus lobata HOM05D005164 ORTHO05D006398 1.7e-40 170.2 205 44.9
HanXRQChr02g0040181 Helianthus annuus HOM05D005164 ORTHO05D006398 2.2e-40 169.9 205 44.9
AUR62031100 Chenopodium quinoa HOM05D005164 ORTHO05D006398 2.9e-40 169.5 203 45.8
Gohir.D05G261900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 3.8e-40 169.1 205 44.9
RcHm_v2.0_Chr6g0300751 Rosa chinensis HOM05D005164 ORTHO05D006398 3.8e-40 169.1 205 44.4
CDE02G4403 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 5.0e-40 168.7 213 45.1
FAN20G1227 Fragaria x ananassa HOM05D005164 ORTHO05D006398 5.0e-40 168.7 205 44.9
Peaxi162Scf00690g00117 Petunia axillaris HOM05D005164 ORTHO05D006398 5.0e-40 168.7 205 44.4
Nitab4.5_0010187g0010 Nicotiana tabacum HOM05D005164 ORTHO05D006398 6.5e-40 168.3 205 44.4
Potri.014G180800 Populus trichocarpa HOM05D005164 ORTHO05D006398 6.5e-40 168.3 205 44.9
Solyc04g080160.3 Solanum lycopersicum HOM05D005164 ORTHO05D006398 6.5e-40 168.3 205 44.4
Sopen04g033750 Solanum pennellii HOM05D005164 ORTHO05D006398 6.5e-40 168.3 205 44.4
PGSC0003DMG400005163 Solanum tuberosum HOM05D005164 ORTHO05D006398 6.5e-40 168.3 205 44.4
CDE01G0241 Ceratophyllum demersum HOM05D005164 ORTHO05D006398 8.5e-40 167.9 213 44.6
DCAR_019523 Daucus carota HOM05D005164 ORTHO05D006398 8.5e-40 167.9 205 44.9
FvH4_2g40000 Fragaria vesca HOM05D005164 ORTHO05D006398 8.5e-40 167.9 205 44.4
FAN15G2586 Fragaria x ananassa HOM05D005164 ORTHO05D006398 8.5e-40 167.9 205 44.4
FAN27G0257 Fragaria x ananassa HOM05D005164 ORTHO05D006398 8.5e-40 167.9 205 44.4
Manes.18G028500 Manihot esculenta HOM05D005164 ORTHO05D006398 8.5e-40 167.9 205 44.4
Potri.002G263200 Populus trichocarpa HOM05D005164 ORTHO05D006398 8.5e-40 167.9 205 44.9
Hund21200 Selenicereus undatus HOM05D005164 ORTHO05D006398 8.5e-40 167.9 203 45.3
TAR376G0296 Trochodendron aralioides HOM05D005164 ORTHO05D006398 8.5e-40 167.9 205 44.4
CSS0020238 Camellia sinensis var. sinensis HOM05D005164 ORTHO05D006398 1.1e-39 167.5 205 44.4
Psat3g167280 Pisum sativum HOM05D005164 ORTHO05D006398 1.1e-39 167.5 205 43.9
TWI56G0324 Tripterygium wilfordii HOM05D005164 ORTHO05D006398 1.1e-39 167.5 205 44.4
GSVIVG01009684001 Vitis vinifera HOM05D005164 ORTHO05D006398 1.1e-39 167.5 205 44.4
AT5G42970 Arabidopsis thaliana HOM05D005164 ORTHO05D006398 1.4e-39 167.2 203 46.3
Gohir.A05G260000 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.4e-39 167.2 205 44.4
Lj3g0003260 Lotus japonicus HOM05D005164 ORTHO05D006398 1.4e-39 167.2 211 42.7
Nitab4.5_0000110g0500 Nicotiana tabacum HOM05D005164 ORTHO05D006398 1.4e-39 167.2 205 44.4
Thecc.08G024200 Theobroma cacao HOM05D005164 ORTHO05D006398 1.4e-39 167.2 203 45.3
CANSAT64G0480 Cannabis sativa HOM05D005164 ORTHO05D006398 1.9e-39 166.8 205 43.9
Cc10_g03080 Coffea canephora HOM05D005164 ORTHO05D006398 1.9e-39 166.8 205 44.4
ATR0733G076 Amborella trichopoda HOM05D005164 ORTHO05D006398 2.5e-39 166.4 205 44.4
AL8G17800 Arabidopsis lyrata HOM05D005164 ORTHO05D006398 2.5e-39 166.4 203 46.3
MSTRG.24294 Avicennia marina HOM05D005164 ORTHO05D006398 2.5e-39 166.4 203 44.8
Carub.0008s0578 Capsella rubella HOM05D005164 ORTHO05D006398 2.5e-39 166.4 203 46.3
CiPaw.15G075600 Carya illinoinensis HOM05D005164 ORTHO05D006398 2.5e-39 166.4 205 44.4
Ciclev10001386m.g Citrus clementina HOM05D005164 ORTHO05D006398 2.5e-39 166.4 205 44.4
Gohir.A03G078200 Gossypium hirsutum HOM05D005164 ORTHO05D006398 2.5e-39 166.4 205 44.4
MD08G1033300 Malus domestica HOM05D005164 ORTHO05D006398 2.5e-39 166.4 205 43.4
Medtr0173s0030 Medicago truncatula HOM05D005164 ORTHO05D006398 2.5e-39 166.4 205 43.4
Nn5g29540 Nelumbo nucifera HOM05D005164 ORTHO05D006398 2.5e-39 166.4 203 44.8
Phvul.011G006200 Phaseolus vulgaris HOM05D005164 ORTHO05D006398 2.5e-39 166.4 211 43.1
EL10Ac8g20456 Beta vulgaris HOM05D005164 ORTHO05D006398 3.2e-39 166.0 203 44.8
AUR62014895 Chenopodium quinoa HOM05D005164 ORTHO05D006398 3.2e-39 166.0 209 43.5
Ca_25003_v3 Cicer arietinum L. HOM05D005164 ORTHO05D006398 3.2e-39 166.0 205 43.4
COL.COLO4_26343 Corchorus olitorius HOM05D005164 ORTHO05D006398 3.2e-39 166.0 203 44.8
CAN.G1126.40 Capsicum annuum HOM05D005164 ORTHO05D006398 4.2e-39 165.6 205 43.9
Gohir.D02G094300 Gossypium hirsutum HOM05D005164 ORTHO05D006398 4.2e-39 165.6 205 44.4
Gorai.005G107200 Gossypium raimondii HOM05D005164 ORTHO05D006398 4.2e-39 165.6 205 44.4
Sc02g0006310 Simmondsia chinensis HOM05D005164 ORTHO05D006398 4.2e-39 165.6 203 44.3
BcaC02g10785 Brassica carinata HOM05D005164 ORTHO05D006398 5.5e-39 165.2 205 44.4
C04p25110 Brassica napus HOM05D005164 ORTHO05D006398 5.5e-39 165.2 205 44.4
BolC4t24015H Brassica oleracea HOM05D005164 ORTHO05D006398 5.5e-39 165.2 205 44.4
Dinv36062 Davidia involucrata HOM05D005164 ORTHO05D006398 5.5e-39 165.2 205 43.9
Glyma.09G231100 Glycine max HOM05D005164 ORTHO05D006398 5.5e-39 165.2 205 43.4
Lj4C784T1 Lonicera japonica HOM05D005164 ORTHO05D006398 5.5e-39 165.2 205 43.9
THA.LOC104814156 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 5.5e-39 165.2 203 44.8
MELO3C003848.2 Cucumis melo HOM05D005164 ORTHO05D006398 7.2e-39 164.9 205 43.9
CsaV3_3G045000 Cucumis sativus L. HOM05D005164 ORTHO05D006398 7.2e-39 164.9 205 43.9
Lsat_1_v5_gn_1_17561 Lactuca sativa HOM05D005164 ORTHO05D006398 7.2e-39 164.9 203 44.3
Sp2g07720 Schrenkiella parvula HOM05D005164 ORTHO05D006398 7.2e-39 164.9 203 45.3
THA.LOC104822841 Tarenaya hassleriana HOM05D005164 ORTHO05D006398 7.2e-39 164.9 203 44.8
BcaB07g30597 Brassica carinata HOM05D005164 ORTHO05D006398 9.4e-39 164.5 203 44.8
CiPaw.16G055400 Carya illinoinensis HOM05D005164 ORTHO05D006398 9.4e-39 164.5 203 44.3
Gohir.A01G116500 Gossypium hirsutum HOM05D005164 ORTHO05D006398 9.4e-39 164.5 205 43.4
Sed0001534 Sechium edule HOM05D005164 ORTHO05D006398 9.4e-39 164.5 203 44.3
BcaC03g16546 Brassica carinata HOM05D005164 ORTHO05D006398 1.2e-38 164.1 203 44.8
BcaC06g31734 Brassica carinata HOM05D005164 ORTHO05D006398 1.2e-38 164.1 203 44.8
A06p48120 Brassica napus HOM05D005164 ORTHO05D006398 1.2e-38 164.1 203 44.8
C02p43640 Brassica napus HOM05D005164 ORTHO05D006398 1.2e-38 164.1 203 44.8
BraA06t27681Z Brassica rapa HOM05D005164 ORTHO05D006398 1.2e-38 164.1 203 44.8
CARHR181050 Cardamine hirsuta HOM05D005164 ORTHO05D006398 1.2e-38 164.1 203 45.3
SGA_v2.0_scaffold326G48708 Striga asiatica HOM05D005164 ORTHO05D006398 1.2e-38 164.1 205 43.9
Eucgr.F01909 Eucalyptus grandis HOM05D005164 ORTHO05D006398 1.6e-38 163.7 203 44.3
Gorai.009G273800 Gossypium raimondii HOM05D005164 ORTHO05D006398 1.6e-38 163.7 208 44.2
MD15G1029900 Malus domestica HOM05D005164 ORTHO05D006398 1.6e-38 163.7 205 42.9
SalBow8G2733 Salvia bowleyana HOM05D005164 ORTHO05D006398 1.6e-38 163.7 205 43.9
VMungo1127G0366 Vigna mungo HOM05D005164 ORTHO05D006398 1.6e-38 163.7 205 43.4
CANSAT25G0119 Cannabis sativa HOM05D005164 ORTHO05D006398 2.1e-38 163.3 210 43.3
Glyma.12G005400 Glycine max HOM05D005164 ORTHO05D006398 2.1e-38 163.3 205 42.9
Gorai.002G128900 Gossypium raimondii HOM05D005164 ORTHO05D006398 2.1e-38 163.3 205 42.4
Aqoxy6G01049 Aquilegia oxysepala HOM05D005164 ORTHO05D006398 2.7e-38 162.9 203 43.8
Migut.N00498 Erythranthe guttata HOM05D005164 ORTHO05D006398 2.7e-38 162.9 203 43.8
PGR031G3751 Punica granatum HOM05D005164 ORTHO05D006398 2.7e-38 162.9 205 43.4
Duzib041G0411 Durio zibethinus HOM05D005164 ORTHO05D006398 3.6e-38 162.5 205 43.4
Thhalv10003436m.g Eutrema salsugineum HOM05D005164 ORTHO05D006398 6.1e-38 161.8 203 44.3
MCO16G668 Micromonas commoda HOM05D005164 ORTHO05D006398 7.9e-38 161.4 212 44.3
A02p27610 Brassica napus HOM05D005164 ORTHO05D006398 1.0e-37 161.0 203 44.3
BolC2t10406H Brassica oleracea HOM05D005164 ORTHO05D006398 1.0e-37 161.0 203 44.3
BraA02t07794Z Brassica rapa HOM05D005164 ORTHO05D006398 1.0e-37 161.0 203 44.3
Gohir.D01G104900 Gossypium hirsutum HOM05D005164 ORTHO05D006398 1.0e-37 161.0 205 42.9
PSO541G6137 Papaver somniferum HOM05D005164 ORTHO05D006398 1.8e-37 160.2 203 42.9
Sed0021376 Sechium edule HOM05D005164 ORTHO05D006398 1.8e-37 160.2 203 43.3
PSO675G3600 Papaver somniferum HOM05D005164 ORTHO05D006398 2.3e-37 159.8 203 42.9
Cre11.g478240 Chlamydomonas reinhardtii HOM05D005164 ORTHO05D006398 3.3e-36 156.0 207 39.6
PRCOL_00006114 Prasinoderma coloniale HOM05D005164 ORTHO05D006398 5.7e-36 155.2 207 40.1
Oeu009868.2 Olea europaea HOM05D005164 ORTHO05D006398 1.3e-35 154.1 213 42.3
RcHm_v2.0_Chr2g0166611 Rosa chinensis HOM05D005164 ORTHO05D006398 6.3e-35 151.8 194 45.4
unitig_22.g6774 Utricularia gibba HOM05D005164 ORTHO05D006398 6.3e-35 151.8 203 42.9
Zm00001eb008060 Zea mays HOM05D005164 ORTHO05D006398 6.3e-35 151.8 247 37.7
Aa31LG9G13090 Aethionema arabicum HOM05D005164 ORTHO05D006398 8.2e-35 151.4 203 43.3
Actinidia22558 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.4e-34 150.6 207 41.5
CAN.G416.53 Capsicum annuum HOM05D005164 ORTHO05D006398 3.1e-34 149.4 211 39.8
Prupe.1G381600 Prunus persica HOM05D005164 ORTHO05D006398 4.5e-33 145.6 205 41.5
Hma1.2p1_0469F.1_g159190 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 2.9e-32 142.9 205 41.0
Manes.05G161900 Manihot esculenta HOM05D005164 ORTHO05D006398 2.9e-32 142.9 171 46.2
ClCG05G019140 Citrullus lanatus HOM05D005164 ORTHO05D006398 8.5e-32 141.4 205 40.5
Hma1.2p1_0023F.1_g014900 Hydrangea macrophylla HOM05D005164 ORTHO05D006398 8.5e-32 141.4 170 45.9
Atru.chr13.515 Acer truncatum HOM05D005164 ORTHO05D006398 1.1e-31 141.0 171 45.0
HPP92_024905 Vanilla planifolia HOM05D005164 ORTHO05D006398 8.8e-29 131.3 164 45.7
MBI17_g39721_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 1.2e-28 131.0 205 38.0
Cfa024373 Carpinus fangiana HOM05D005164 ORTHO05D006398 2.6e-28 129.8 170 41.2
Rhsim06G0035000 Rhododendron simsii HOM05D005164 ORTHO05D006398 2.6e-28 129.8 225 36.9
Sabra14G0141000 Salix brachista HOM05D005164 ORTHO05D006398 9.7e-28 127.9 235 36.6
TPR.G3648 Trifolium pratense HOM05D005164 ORTHO05D006398 4.8e-27 125.6 204 38.2
Actinidia15313 Actinidia chinensis HOM05D005164 ORTHO05D006398 1.4e-21 107.5 214 33.6
vmacro21627 Vaccinium macrocarpon HOM05D005164 ORTHO05D006398 2.0e-17 93.6 205 34.1
MBI17_g35116_MAGBIO Magnolia biondii HOM05D005164 ORTHO05D006398 3.4e-12 76.3 165 32.1
Duzib093G0265 Durio zibethinus HOM05D005164 ORTHO05D006398 6.3e-11 72.0 205 27.8


User provided reference genes

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