Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 2.1e-166 589.0 291 100.0
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 1.3e-35 154.5 287 33.8
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.3e-35 154.5 287 33.1
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.7e-35 154.1 288 33.7
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 1.7e-35 154.1 310 32.3
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 2.9e-35 153.3 291 33.7
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 3.8e-35 152.9 291 33.7
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 3.8e-35 152.9 291 33.7
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 4.9e-35 152.5 288 34.4
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 6.4e-35 152.1 287 34.5
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 6.4e-35 152.1 287 33.4
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 6.4e-35 152.1 287 33.4
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 8.4e-35 151.8 288 33.0
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 8.4e-35 151.8 267 34.8
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 8.4e-35 151.8 290 34.1
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 1.1e-34 151.4 287 33.1
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.1e-34 151.4 291 33.0
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.4e-34 151.0 307 31.3
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.9e-34 150.6 291 33.3
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 1.9e-34 150.6 292 34.9
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 1.9e-34 150.6 287 34.5
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 2.4e-34 150.2 307 30.3
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 3.2e-34 149.8 291 33.3
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 5.4e-34 149.1 287 32.8
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 9.3e-34 148.3 292 33.6
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 9.3e-34 148.3 291 33.7
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 1.2e-33 147.9 291 33.3
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 1.6e-33 147.5 290 32.4
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.6e-33 147.5 288 33.7
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.6e-33 147.5 287 32.4
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 2.1e-33 147.1 292 33.6
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 2.1e-33 147.1 288 33.0
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 2.1e-33 147.1 288 33.3
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 2.7e-33 146.7 287 33.4
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 2.7e-33 146.7 287 32.4
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 2.7e-33 146.7 291 33.3
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.7e-33 146.7 291 34.4
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 3.5e-33 146.4 291 33.0
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 3.5e-33 146.4 287 32.4
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 4.6e-33 146.0 292 33.2
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 4.6e-33 146.0 289 32.5
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 4.6e-33 146.0 307 30.3
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 4.6e-33 146.0 269 33.5
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 6.0e-33 145.6 306 30.4
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 6.0e-33 145.6 288 31.9
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 7.8e-33 145.2 287 32.8
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.0e-32 144.8 291 32.6
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.0e-32 144.8 310 31.3
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.3e-32 144.4 287 32.8
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.3e-32 144.4 293 33.1
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 1.3e-32 144.4 293 33.1
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 1.7e-32 144.1 289 32.9
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.7e-32 144.1 290 32.4
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 2.3e-32 143.7 288 32.3
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 3.0e-32 143.3 305 29.8
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 3.0e-32 143.3 307 30.9
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 3.9e-32 142.9 297 32.3
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 5.1e-32 142.5 288 31.9
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 6.6e-32 142.1 314 30.6
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 6.6e-32 142.1 288 32.3
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 8.7e-32 141.7 294 31.6
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 1.1e-31 141.4 287 33.8
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.5e-31 141.0 293 32.8
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.5e-31 141.0 298 31.9
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 2.5e-31 140.2 288 31.2
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 3.3e-31 139.8 288 31.6
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 3.3e-31 139.8 288 31.6
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 3.3e-31 139.8 290 32.1
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 4.3e-31 139.4 288 33.0
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 4.3e-31 139.4 297 31.6
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 1.3e-30 137.9 249 33.3
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 2.1e-30 137.1 286 30.1
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 3.1e-29 133.3 288 31.9
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 4.0e-29 132.9 281 32.4
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 5.3e-29 132.5 313 30.4
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 1.2e-28 131.3 290 31.0
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 1.2e-28 131.3 250 33.2
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.5e-28 131.0 281 32.7
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 2.6e-28 130.2 301 28.9
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 4.4e-28 129.4 293 30.0
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.3e-27 127.9 259 31.3
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 2.9e-27 126.7 289 30.1
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 9.3e-26 121.7 305 28.5
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 1.2e-25 121.3 319 29.2
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 2.7e-25 120.2 248 33.9
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 7.8e-25 118.6 275 30.2
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 8.7e-24 115.2 309 28.8
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 4.3e-23 112.8 229 32.3
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.6e-22 110.9 271 29.2
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 3.6e-22 109.8 106 46.2
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 8.1e-22 108.6 304 28.3
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 5.3e-21 105.9 308 27.9
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 5.3e-21 105.9 174 35.6
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 4.5e-20 102.8 107 45.8
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 7.6e-20 102.1 173 34.1
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.7e-19 100.9 173 34.7
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.7e-19 100.9 273 30.8
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 6.4e-19 99.0 174 33.9
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 8.4e-19 98.6 106 43.4
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 4.2e-18 96.3 117 41.0
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 5.4e-18 95.9 304 26.0
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 7.9e-17 92.0 116 42.2
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.0e-16 91.7 259 27.0
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 8.7e-16 88.6 107 40.2
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.9e-15 87.4 95 43.2
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 1.9e-15 87.4 167 30.5
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 2.4e-13 80.5 262 26.0
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.5e-12 77.8 42 78.6
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 3.4e-12 76.6 42 76.2
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.4e-12 76.6 42 76.2
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 2.2e-11 73.9 231 25.1
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.9e-11 73.6 290 24.5
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 3.8e-11 73.2 42 71.4
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 6.5e-11 72.4 155 29.0
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 8.4e-11 72.0 170 30.6
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 8.4e-11 72.0 155 29.0
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 1.4e-10 71.2 210 25.7
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.4e-10 71.2 234 24.8
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.5e-10 70.5 243 25.9
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 2.5e-10 70.5 246 25.2
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 4.2e-10 69.7 68 47.1
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 4.6e-09 66.2 155 29.7
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 6.7e-08 62.4 277 23.1
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 1.5e-07 61.2 35 71.4
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.3e-06 58.2 31 74.2


User provided reference genes

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