Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26265 Corylus avellana HOM05D003259 ORTHO05D003695 1.5e-118 429.5 208 100.0
MELO3C006517.2 Cucumis melo HOM05D003259 ORTHO05D003695 3.6e-32 142.5 193 40.4
CsaV3_3G013100 Cucumis sativus L. HOM05D003259 ORTHO05D003695 3.6e-32 142.5 193 39.9
ClCG05G005040 Citrullus lanatus HOM05D003259 ORTHO05D003695 4.7e-32 142.1 193 39.9
MSTRG.4045 Avicennia marina HOM05D003259 ORTHO05D003695 2.4e-31 139.8 192 40.1
Sed0017593 Sechium edule HOM05D003259 ORTHO05D003695 4.0e-31 139.0 193 38.9
Sed0006877 Sechium edule HOM05D003259 ORTHO05D003695 5.2e-31 138.7 193 38.3
EL10Ac3g06480 Beta vulgaris HOM05D003259 ORTHO05D003695 1.2e-30 137.5 192 40.1
AUR62018258 Chenopodium quinoa HOM05D003259 ORTHO05D003695 2.6e-30 136.3 192 39.1
MSTRG.9968 Avicennia marina HOM05D003259 ORTHO05D003695 3.4e-30 136.0 192 39.6
Dinv14018 Davidia involucrata HOM05D003259 ORTHO05D003695 3.4e-30 136.0 192 38.5
CiPaw.01G198200 Carya illinoinensis HOM05D003259 ORTHO05D003695 5.8e-30 135.2 192 37.5
AUR62033663 Chenopodium quinoa HOM05D003259 ORTHO05D003695 5.8e-30 135.2 192 38.5
Migut.G00362 Erythranthe guttata HOM05D003259 ORTHO05D003695 5.8e-30 135.2 192 39.1
CiPaw.02G122900 Carya illinoinensis HOM05D003259 ORTHO05D003695 7.6e-30 134.8 192 38.0
AUR62034724 Chenopodium quinoa HOM05D003259 ORTHO05D003695 7.6e-30 134.8 195 38.5
ClCG06G006350 Citrullus lanatus HOM05D003259 ORTHO05D003695 7.6e-30 134.8 193 37.8
Eucgr.H03435 Eucalyptus grandis HOM05D003259 ORTHO05D003695 1.3e-29 134.0 192 39.1
Ah.07g204220 Amaranthus hybridus HOM05D003259 ORTHO05D003695 1.7e-29 133.7 192 39.1
A08p11470 Brassica napus HOM05D003259 ORTHO05D003695 1.7e-29 133.7 192 38.0
AL7G41070 Arabidopsis lyrata HOM05D003259 ORTHO05D003695 2.2e-29 133.3 192 38.0
Potri.010G084800 Populus trichocarpa HOM05D003259 ORTHO05D003695 2.2e-29 133.3 192 38.0
TPR.G25883 Trifolium pratense HOM05D003259 ORTHO05D003695 2.2e-29 133.3 192 38.5
VMungo0720G2628 Vigna mungo HOM05D003259 ORTHO05D003695 2.2e-29 133.3 192 37.5
AT4G14800 Arabidopsis thaliana HOM05D003259 ORTHO05D003695 2.9e-29 132.9 192 38.0
CARHR221350 Cardamine hirsuta HOM05D003259 ORTHO05D003695 2.9e-29 132.9 192 37.5
Lj3A732G69 Lonicera japonica HOM05D003259 ORTHO05D003695 2.9e-29 132.9 192 37.5
Sed0022685 Sechium edule HOM05D003259 ORTHO05D003695 2.9e-29 132.9 193 36.8
Cfa008471 Carpinus fangiana HOM05D003259 ORTHO05D003695 3.8e-29 132.5 192 38.0
Medtr5g006840 Medicago truncatula HOM05D003259 ORTHO05D003695 3.8e-29 132.5 192 38.0
Medtr5g012470 Medicago truncatula HOM05D003259 ORTHO05D003695 3.8e-29 132.5 192 38.0
Psat0s2648g0080 Pisum sativum HOM05D003259 ORTHO05D003695 3.8e-29 132.5 192 37.5
TWI73G0562 Tripterygium wilfordii HOM05D003259 ORTHO05D003695 3.8e-29 132.5 192 36.5
unitig_32.g11726 Utricularia gibba HOM05D003259 ORTHO05D003695 3.8e-29 132.5 191 38.7
Aa31LG9G2570 Aethionema arabicum HOM05D003259 ORTHO05D003695 4.9e-29 132.1 192 37.5
BcaNung00332 Brassica carinata HOM05D003259 ORTHO05D003695 4.9e-29 132.1 192 37.5
Thhalv10026266m.g Eutrema salsugineum HOM05D003259 ORTHO05D003695 4.9e-29 132.1 191 38.2
Glyma.10G295600 Glycine max HOM05D003259 ORTHO05D003695 4.9e-29 132.1 192 37.5
Actinidia08482 Actinidia chinensis HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 38.0
BcaC07g37854 Brassica carinata HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 37.5
Ciclev10005907m.g Citrus clementina HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 37.5
Glyma.20G245500 Glycine max HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 37.0
MD13G1196600 Malus domestica HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 38.0
MD16G1197000 Malus domestica HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 38.0
Prupe.1G017400 Prunus persica HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 38.0
SalBow2G2299 Salvia bowleyana HOM05D003259 ORTHO05D003695 6.4e-29 131.7 192 39.1
arahy.Tifrunner.gnm1.ann1.MJA9UR Arachis hypogaea HOM05D003259 ORTHO05D003695 8.4e-29 131.3 192 38.0
Ah.16g101520 Amaranthus hybridus HOM05D003259 ORTHO05D003695 1.1e-28 131.0 192 38.0
BcaC09g50161 Brassica carinata HOM05D003259 ORTHO05D003695 1.1e-28 131.0 192 37.5
C01p28310 Brassica napus HOM05D003259 ORTHO05D003695 1.1e-28 131.0 192 37.5
Manes.15G030800 Manihot esculenta HOM05D003259 ORTHO05D003695 1.1e-28 131.0 192 38.5
Sabra10G0058500 Salix brachista HOM05D003259 ORTHO05D003695 1.1e-28 131.0 192 38.0
TWI09G1548 Tripterygium wilfordii HOM05D003259 ORTHO05D003695 1.1e-28 131.0 192 36.5
arahy.Tifrunner.gnm1.ann1.BRW3YU Arachis hypogaea HOM05D003259 ORTHO05D003695 1.4e-28 130.6 192 38.0
BcaB04g18261 Brassica carinata HOM05D003259 ORTHO05D003695 1.4e-28 130.6 191 37.7
A05p16740 Brassica napus HOM05D003259 ORTHO05D003695 1.4e-28 130.6 191 38.2
Psat0s1985g0120 Pisum sativum HOM05D003259 ORTHO05D003695 1.4e-28 130.6 192 38.0
RcHm_v2.0_Chr4g0415561 Rosa chinensis HOM05D003259 ORTHO05D003695 1.4e-28 130.6 192 38.0
TPR.G37956 Trifolium pratense HOM05D003259 ORTHO05D003695 1.4e-28 130.6 192 37.5
A01p22750 Brassica napus HOM05D003259 ORTHO05D003695 1.9e-28 130.2 192 37.5
Carub.0003s2277 Capsella rubella HOM05D003259 ORTHO05D003695 1.9e-28 130.2 191 37.2
Carub.0007s2733 Capsella rubella HOM05D003259 ORTHO05D003695 1.9e-28 130.2 191 37.7
FAN01G0310 Fragaria x ananassa HOM05D003259 ORTHO05D003695 1.9e-28 130.2 192 37.5
AL3G36920 Arabidopsis lyrata HOM05D003259 ORTHO05D003695 2.4e-28 129.8 191 37.2
BcaB04g20508 Brassica carinata HOM05D003259 ORTHO05D003695 2.4e-28 129.8 191 37.2
Eucgr.D00194 Eucalyptus grandis HOM05D003259 ORTHO05D003695 2.4e-28 129.8 192 37.5
Gohir.D02G039400 Gossypium hirsutum HOM05D003259 ORTHO05D003695 2.4e-28 129.8 192 37.5
Gorai.005G043600 Gossypium raimondii HOM05D003259 ORTHO05D003695 2.4e-28 129.8 192 37.5
Sp3g20390 Schrenkiella parvula HOM05D003259 ORTHO05D003695 2.4e-28 129.8 191 37.2
AT3G22630 Arabidopsis thaliana HOM05D003259 ORTHO05D003695 3.2e-28 129.4 191 37.2
BcaC08g44272 Brassica carinata HOM05D003259 ORTHO05D003695 3.2e-28 129.4 191 37.7
C06p16930 Brassica napus HOM05D003259 ORTHO05D003695 3.2e-28 129.4 191 37.7
BraA08t33141Z Brassica rapa HOM05D003259 ORTHO05D003695 3.2e-28 129.4 207 35.7
CSS0029971 Camellia sinensis var. sinensis HOM05D003259 ORTHO05D003695 3.2e-28 129.4 192 36.5
CARHR098490 Cardamine hirsuta HOM05D003259 ORTHO05D003695 3.2e-28 129.4 191 37.2
FAN12G1048 Fragaria x ananassa HOM05D003259 ORTHO05D003695 3.2e-28 129.4 192 37.0
Phvul.007G004300 Phaseolus vulgaris HOM05D003259 ORTHO05D003695 3.2e-28 129.4 192 37.0
Sabra08G0118300 Salix brachista HOM05D003259 ORTHO05D003695 3.2e-28 129.4 192 37.0
THA.LOC104803041 Tarenaya hassleriana HOM05D003259 ORTHO05D003695 3.2e-28 129.4 192 37.0
COL.COLO4_11870 Corchorus olitorius HOM05D003259 ORTHO05D003695 4.2e-28 129.0 192 37.5
FvH4_4g15960 Fragaria vesca HOM05D003259 ORTHO05D003695 4.2e-28 129.0 192 37.0
FvH4_7g08790 Fragaria vesca HOM05D003259 ORTHO05D003695 4.2e-28 129.0 192 37.0
FAN06G0247 Fragaria x ananassa HOM05D003259 ORTHO05D003695 4.2e-28 129.0 192 37.0
FAN10G2013 Fragaria x ananassa HOM05D003259 ORTHO05D003695 4.2e-28 129.0 192 37.0
Lalb_Chr05g0211141 Lupinus albus HOM05D003259 ORTHO05D003695 4.2e-28 129.0 192 37.0
PGR004G2164 Punica granatum HOM05D003259 ORTHO05D003695 4.2e-28 129.0 192 37.0
Sp7g12930 Schrenkiella parvula HOM05D003259 ORTHO05D003695 4.2e-28 129.0 191 37.2
Actinidia40133 Actinidia chinensis HOM05D003259 ORTHO05D003695 5.4e-28 128.6 192 37.5
Gohir.A02G032700 Gossypium hirsutum HOM05D003259 ORTHO05D003695 5.4e-28 128.6 192 37.0
CANSAT56G2276 Cannabis sativa HOM05D003259 ORTHO05D003695 7.1e-28 128.3 192 37.0
LjContig00222g0022811 Lotus japonicus HOM05D003259 ORTHO05D003695 7.1e-28 128.3 192 37.5
PSO210G2325 Papaver somniferum HOM05D003259 ORTHO05D003695 7.1e-28 128.3 191 37.7
PSO761G0105 Papaver somniferum HOM05D003259 ORTHO05D003695 7.1e-28 128.3 191 37.7
Potri.008G155500 Populus trichocarpa HOM05D003259 ORTHO05D003695 7.1e-28 128.3 192 35.9
BcaC05g28030 Brassica carinata HOM05D003259 ORTHO05D003695 9.2e-28 127.9 191 36.6
A05p15600 Brassica napus HOM05D003259 ORTHO05D003695 9.2e-28 127.9 191 37.7
C05p40450 Brassica napus HOM05D003259 ORTHO05D003695 9.2e-28 127.9 191 36.6
BolC8t48244H Brassica oleracea HOM05D003259 ORTHO05D003695 9.2e-28 127.9 206 35.4
CANSAT56G0535 Cannabis sativa HOM05D003259 ORTHO05D003695 9.2e-28 127.9 192 36.5
Duzib212G0469 Durio zibethinus HOM05D003259 ORTHO05D003695 9.2e-28 127.9 192 37.0
Thhalv10021541m.g Eutrema salsugineum HOM05D003259 ORTHO05D003695 9.2e-28 127.9 191 36.6
FAN10G0354 Fragaria x ananassa HOM05D003259 ORTHO05D003695 9.2e-28 127.9 191 37.2
Gohir.D09G219900 Gossypium hirsutum HOM05D003259 ORTHO05D003695 9.2e-28 127.9 192 37.0
Manes.03G175800 Manihot esculenta HOM05D003259 ORTHO05D003695 9.2e-28 127.9 192 37.0
Peaxi162Scf00092g00321 Petunia axillaris HOM05D003259 ORTHO05D003695 9.2e-28 127.9 192 37.0
THA.LOC104808561 Tarenaya hassleriana HOM05D003259 ORTHO05D003695 9.2e-28 127.9 192 36.5
A05p26050 Brassica napus HOM05D003259 ORTHO05D003695 1.2e-27 127.5 191 36.6
Duzib151G0089 Durio zibethinus HOM05D003259 ORTHO05D003695 1.2e-27 127.5 192 37.0
Thecc.04G235300 Theobroma cacao HOM05D003259 ORTHO05D003695 1.2e-27 127.5 192 37.0
HPP92_001911 Vanilla planifolia HOM05D003259 ORTHO05D003695 1.2e-27 127.5 192 36.5
COL.COLO4_21517 Corchorus olitorius HOM05D003259 ORTHO05D003695 1.6e-27 127.1 192 37.0
Nitab4.5_0002307g0060 Nicotiana tabacum HOM05D003259 ORTHO05D003695 1.6e-27 127.1 192 35.9
Nitab4.5_0004062g0050 Nicotiana tabacum HOM05D003259 ORTHO05D003695 1.6e-27 127.1 192 35.9
Sc13g0004590 Simmondsia chinensis HOM05D003259 ORTHO05D003695 1.6e-27 127.1 192 37.5
CAN.G1094.26 Capsicum annuum HOM05D003259 ORTHO05D003695 2.1e-27 126.7 192 35.9
Gorai.006G240900 Gossypium raimondii HOM05D003259 ORTHO05D003695 2.1e-27 126.7 192 36.5
FAN03G0633 Fragaria x ananassa HOM05D003259 ORTHO05D003695 2.7e-27 126.3 192 36.5
unitig_748.g8540 Utricularia gibba HOM05D003259 ORTHO05D003695 2.7e-27 126.3 180 39.4
BcaB06g26377 Brassica carinata HOM05D003259 ORTHO05D003695 3.5e-27 125.9 191 36.6
Hma1.2p1_1572F.1_g291460 Hydrangea macrophylla HOM05D003259 ORTHO05D003695 3.5e-27 125.9 192 36.5
Hma1.2p1_2201F.1_g317046 Hydrangea macrophylla HOM05D003259 ORTHO05D003695 3.5e-27 125.9 192 36.5
Nn1g02376 Nelumbo nucifera HOM05D003259 ORTHO05D003695 3.5e-27 125.9 192 35.9
PGSC0003DMG400032248 Solanum tuberosum HOM05D003259 ORTHO05D003695 3.5e-27 125.9 192 35.9
TAR633G1233 Trochodendron aralioides HOM05D003259 ORTHO05D003695 3.5e-27 125.9 192 35.4
Gohir.A09G217500 Gossypium hirsutum HOM05D003259 ORTHO05D003695 4.6e-27 125.6 192 35.9
CSS0015937 Camellia sinensis var. sinensis HOM05D003259 ORTHO05D003695 6.0e-27 125.2 192 35.9
Cc03_g04050 Coffea canephora HOM05D003259 ORTHO05D003695 6.0e-27 125.2 193 35.8
Hma1.2p1_0602F.1_g187520 Hydrangea macrophylla HOM05D003259 ORTHO05D003695 6.0e-27 125.2 192 35.4
Lj6A602G55 Lonicera japonica HOM05D003259 ORTHO05D003695 7.8e-27 124.8 223 33.2
Aqoxy5G00437 Aquilegia oxysepala HOM05D003259 ORTHO05D003695 1.0e-26 124.4 192 35.9
Cpa.g.sc54.84 Carica papaya HOM05D003259 ORTHO05D003695 1.0e-26 124.4 192 35.9
Sopen09g031200 Solanum pennellii HOM05D003259 ORTHO05D003695 1.0e-26 124.4 192 35.4
BolC1t02760H Brassica oleracea HOM05D003259 ORTHO05D003695 1.3e-26 124.0 212 34.4
Manes.05G079300 Manihot esculenta HOM05D003259 ORTHO05D003695 1.3e-26 124.0 192 35.4
Os03g0695600 Oryza sativa ssp. japonica HOM05D003259 ORTHO05D003695 1.3e-26 124.0 192 38.5
Pp3c25_9390 Physcomitrium patens HOM05D003259 ORTHO05D003695 1.3e-26 124.0 193 35.2
Haze_11202 Corylus avellana HOM05D003259 ORTHO05D003695 1.7e-26 123.6 208 34.1
Nn6g34120 Nelumbo nucifera HOM05D003259 ORTHO05D003695 2.3e-26 123.2 192 35.4
TAR362G0533 Trochodendron aralioides HOM05D003259 ORTHO05D003695 2.3e-26 123.2 192 35.4
BolC5t32787H Brassica oleracea HOM05D003259 ORTHO05D003695 3.0e-26 122.9 203 34.5
Zm00001eb216990 Zea mays HOM05D003259 ORTHO05D003695 3.0e-26 122.9 192 37.5
MCO08G200 Micromonas commoda HOM05D003259 ORTHO05D003695 3.9e-26 122.5 189 37.0
BraA01t02187Z Brassica rapa HOM05D003259 ORTHO05D003695 5.1e-26 122.1 210 34.3
Solyc09g082320.3 Solanum lycopersicum HOM05D003259 ORTHO05D003695 6.6e-26 121.7 192 34.9
ATR0665G448 Amborella trichopoda HOM05D003259 ORTHO05D003695 1.1e-25 120.9 192 34.4
BraA05t21489Z Brassica rapa HOM05D003259 ORTHO05D003695 1.1e-25 120.9 204 34.3
HanXRQChr16g0526461 Helianthus annuus HOM05D003259 ORTHO05D003695 1.1e-25 120.9 192 35.9
SMO364G0169 Selaginella moellendorffii HOM05D003259 ORTHO05D003695 1.1e-25 120.9 200 37.0
BolC6t36889H Brassica oleracea HOM05D003259 ORTHO05D003695 1.9e-25 120.2 214 33.6
CDE06G2608 Ceratophyllum demersum HOM05D003259 ORTHO05D003695 1.9e-25 120.2 192 34.9
BraA05t20475Z Brassica rapa HOM05D003259 ORTHO05D003695 2.5e-25 119.8 211 34.1
BraA05t20578Z Brassica rapa HOM05D003259 ORTHO05D003695 5.6e-25 118.6 211 33.6
CBR_g31992 Chara braunii HOM05D003259 ORTHO05D003695 5.6e-25 118.6 191 35.6
Lj6A605G73 Lonicera japonica HOM05D003259 ORTHO05D003695 7.3e-25 118.2 223 32.7
arahy.Tifrunner.gnm1.ann1.1L9YJM Arachis hypogaea HOM05D003259 ORTHO05D003695 1.4e-23 114.0 192 33.3
Rhsim04G0199900 Rhododendron simsii HOM05D003259 ORTHO05D003695 1.4e-23 114.0 201 33.3
Actinidia36948 Actinidia chinensis HOM05D003259 ORTHO05D003695 2.4e-23 113.2 175 37.7
PRCOL_00001675 Prasinoderma coloniale HOM05D003259 ORTHO05D003695 2.4e-23 113.2 192 32.8
MBI01_g46397_MAGBIO Magnolia biondii HOM05D003259 ORTHO05D003695 4.0e-23 112.5 192 34.4
CDE07G1821 Ceratophyllum demersum HOM05D003259 ORTHO05D002832 6.9e-23 111.7 189 33.3
C01p41690 Brassica napus HOM05D003259 ORTHO05D003695 1.2e-22 110.9 194 34.5
GSVIVG01001182001 Vitis vinifera HOM05D003259 ORTHO05D003695 2.0e-22 110.2 155 37.4
Cre14.g610950 Chlamydomonas reinhardtii HOM05D003259 ORTHO05D003695 2.6e-22 109.8 193 30.1
AUR62037750 Chenopodium quinoa HOM05D003259 ORTHO05D003695 2.9e-21 106.3 192 34.4
Dinv44556 Davidia involucrata HOM05D003259 ORTHO05D003695 2.9e-21 106.3 141 39.7
Oeu058967.1 Olea europaea HOM05D003259 ORTHO05D003695 2.4e-20 103.2 149 36.9
Dinv09872 Davidia involucrata HOM05D003259 ORTHO05D003695 2.1e-19 100.1 150 38.0
arahy.Tifrunner.gnm1.ann1.JLXU2D Arachis hypogaea HOM05D003259 ORTHO05D003695 3.5e-19 99.4 170 34.1
Zm00001eb053790 Zea mays HOM05D003259 ORTHO05D003695 3.5e-19 99.4 192 33.3
BcaC09g49185 Brassica carinata HOM05D003259 ORTHO05D003695 6.0e-19 98.6 217 30.4
QL08p013026 Quercus lobata HOM05D003259 ORTHO05D003695 1.3e-18 97.4 276 25.7
SGA_v2.0_scaffold191G40492 Striga asiatica HOM05D003259 ORTHO05D003695 6.6e-18 95.1 281 26.7
A01p32530 Brassica napus HOM05D003259 ORTHO05D003695 8.7e-18 94.7 191 30.9
BolC1t04123H Brassica oleracea HOM05D003259 ORTHO05D003695 2.9e-13 79.7 158 30.4
vmacro08791 Vaccinium macrocarpon HOM05D003259 ORTHO05D003695 4.2e-12 75.9 97 41.2
Hma1.2p1_1572F.1_g291450 Hydrangea macrophylla HOM05D003259 ORTHO05D003695 9.3e-12 74.7 97 40.2
Hma1.2p1_2201F.1_g317043 Hydrangea macrophylla HOM05D003259 ORTHO05D003695 9.3e-12 74.7 97 40.2
AUR62033662 Chenopodium quinoa HOM05D003259 ORTHO05D003695 3.5e-11 72.8 94 39.4
QL06p001676 Quercus lobata HOM05D003259 ORTHO05D003695 3.5e-11 72.8 97 39.2
Medtr2g050000 Medicago truncatula HOM05D003259 ORTHO05D003695 4.6e-11 72.4 96 40.6
Hund12101 Selenicereus undatus HOM05D003259 ORTHO05D003695 7.4e-09 65.1 93 35.5
Oeu030570.1 Olea europaea HOM05D003259 ORTHO05D003695 2.1e-08 63.5 93 36.6
Oeu018973.1 Olea europaea HOM05D003259 ORTHO05D003695 2.8e-08 63.2 93 36.6
BraA01t03383Z Brassica rapa HOM05D003259 ORTHO05D003695 2.4e-07 60.1 88 35.2
SMO228G0053 Selaginella moellendorffii HOM05D003096 ORTHO05D003521 2.4e-07 60.1 198 22.2
Thecc.01G274700 Theobroma cacao HOM05D003259 ORTHO05D003695 2.4e-07 60.1 141 29.8
BcaNung06727 Brassica carinata HOM05D003259 ORTHO05D003695 1.5e-06 57.4 71 39.4


User provided reference genes

Program Settings