Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 1.1e-210 736.5 402 100.0
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 7.5e-50 202.2 282 42.2
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 9.7e-50 201.8 285 42.8
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 2.8e-49 200.3 284 42.3
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 3.7e-49 199.9 297 41.4
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 3.7e-49 199.9 297 41.4
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 4.8e-49 199.5 289 42.6
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 1.4e-48 198.0 298 40.9
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 1.4e-48 198.0 298 40.9
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 4.1e-48 196.4 280 42.1
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 5.3e-48 196.1 298 40.6
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 9.1e-48 195.3 284 41.9
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 1.6e-47 194.5 276 41.7
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.6e-47 194.5 291 41.2
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 1.6e-47 194.5 280 41.8
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 1.6e-47 194.5 286 43.0
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 2.0e-47 194.1 291 40.9
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 2.0e-47 194.1 270 43.3
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 2.7e-47 193.7 278 42.1
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.7e-47 193.7 277 43.0
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 4.5e-47 193.0 298 40.6
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 5.9e-47 192.6 293 41.3
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 7.7e-47 192.2 294 40.8
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 1.0e-46 191.8 298 40.9
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 1.0e-46 191.8 291 40.9
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 1.0e-46 191.8 277 42.2
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 1.0e-46 191.8 286 41.3
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 1.3e-46 191.4 297 40.7
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 1.3e-46 191.4 283 41.0
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 1.3e-46 191.4 286 42.3
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 1.7e-46 191.0 277 42.2
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 2.2e-46 190.7 293 41.0
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 2.2e-46 190.7 286 40.9
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 2.9e-46 190.3 284 43.0
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 3.8e-46 189.9 297 41.1
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 3.8e-46 189.9 297 41.1
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 3.8e-46 189.9 293 41.3
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 3.8e-46 189.9 277 42.2
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 5.0e-46 189.5 274 41.6
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 5.0e-46 189.5 277 40.1
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 5.0e-46 189.5 280 39.6
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 6.5e-46 189.1 277 42.2
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 6.5e-46 189.1 278 42.1
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 6.5e-46 189.1 270 43.0
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 6.5e-46 189.1 278 42.8
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 6.5e-46 189.1 278 41.7
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 8.5e-46 188.7 245 44.5
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 8.5e-46 188.7 293 42.3
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 8.5e-46 188.7 278 42.1
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 8.5e-46 188.7 293 40.3
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.1e-45 188.3 285 41.4
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.1e-45 188.3 291 41.6
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 1.1e-45 188.3 278 41.7
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 1.1e-45 188.3 278 41.7
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 1.5e-45 188.0 283 40.6
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 1.5e-45 188.0 297 40.7
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 1.9e-45 187.6 293 42.0
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 2.5e-45 187.2 283 41.0
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 2.5e-45 187.2 277 41.5
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 3.2e-45 186.8 276 42.4
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 3.2e-45 186.8 283 40.6
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 3.2e-45 186.8 293 40.6
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 3.2e-45 186.8 297 40.7
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 4.2e-45 186.4 276 42.0
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 5.5e-45 186.0 324 37.7
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 5.5e-45 186.0 276 41.3
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 5.5e-45 186.0 276 41.7
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 7.2e-45 185.7 288 39.6
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 9.4e-45 185.3 285 41.8
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 9.4e-45 185.3 257 41.6
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 1.2e-44 184.9 277 41.2
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 1.2e-44 184.9 283 40.6
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 1.2e-44 184.9 276 42.0
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 1.6e-44 184.5 275 41.1
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 2.7e-44 183.7 297 39.7
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.7e-44 183.7 278 40.6
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 3.6e-44 183.3 284 39.4
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 3.6e-44 183.3 282 39.7
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 3.6e-44 183.3 278 40.6
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 6.1e-44 182.6 294 39.8
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 8.0e-44 182.2 283 39.9
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 8.0e-44 182.2 277 40.8
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 8.0e-44 182.2 276 39.9
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 1.4e-43 181.4 283 40.6
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 1.4e-43 181.4 275 41.8
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.8e-43 181.0 278 40.3
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 4.0e-43 179.9 295 40.0
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 4.0e-43 179.9 249 42.2
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 6.8e-43 179.1 300 39.3
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 6.8e-43 179.1 311 37.0
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 2.6e-42 177.2 278 39.6
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 3.4e-42 176.8 277 40.1
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 3.4e-42 176.8 218 49.1
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 5.7e-42 176.0 277 39.4
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 7.5e-42 175.6 210 46.2
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 9.8e-42 175.3 270 40.7
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 9.8e-42 175.3 284 39.1
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 2.8e-41 173.7 284 39.1
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 3.7e-41 173.3 241 43.2
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 6.3e-41 172.6 254 41.3
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 1.8e-40 171.0 269 38.7
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.8e-40 171.0 314 37.6
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 3.1e-40 170.2 255 40.0
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 5.4e-40 169.5 230 44.8
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 9.1e-40 168.7 277 40.8
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 2.0e-39 167.5 248 43.1
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 5.0e-38 162.9 208 45.7
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 1.5e-37 161.4 252 41.3
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 2.3e-35 154.1 222 43.2
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 8.8e-35 152.1 208 44.2
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 2.2e-33 147.5 265 38.5
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 3.5e-31 140.2 297 34.3
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 5.9e-31 139.4 241 39.0
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 2.5e-29 134.0 193 41.5
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 4.3e-29 133.3 205 40.5
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.7e-25 121.3 176 42.0
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 2.4e-24 117.5 170 41.8
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 9.2e-24 115.5 169 39.6
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 3.5e-15 87.0 123 40.7
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 4.6e-15 86.7 126 39.7
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 7.8e-15 85.9 139 38.1
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.6e-12 78.2 98 44.9
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 2.4e-08 64.3 80 46.2
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 2.1e-07 61.2 77 42.9
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 6.0e-07 59.7 58 55.2
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.3e-06 58.5 54 53.7
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 3.0e-06 57.4 51 51.0
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 5.1e-06 56.6 46 54.3
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 5.1e-06 56.6 116 36.2


User provided reference genes

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