Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 1.0e-119 433.3 210 100.0
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 3.9e-42 175.6 207 42.0
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 8.7e-42 174.5 208 42.8
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 8.7e-42 174.5 208 41.8
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.1e-41 174.1 207 41.5
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 1.5e-41 173.7 208 41.8
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 3.3e-41 172.6 208 41.3
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 3.3e-41 172.6 208 41.3
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 4.3e-41 172.2 207 41.1
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 4.3e-41 172.2 207 41.5
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 4.3e-41 172.2 206 42.7
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 7.4e-41 171.4 207 41.1
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 9.6e-41 171.0 206 42.7
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 1.3e-40 170.6 207 40.6
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 1.6e-40 170.2 209 42.6
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 2.1e-40 169.9 207 40.6
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 2.1e-40 169.9 207 41.5
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 4.8e-40 168.7 208 40.4
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 6.2e-40 168.3 207 39.6
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 6.2e-40 168.3 206 41.3
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 6.2e-40 168.3 208 40.9
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 6.2e-40 168.3 209 42.6
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 8.1e-40 167.9 206 41.3
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.1e-39 167.5 206 41.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 1.1e-39 167.5 207 40.1
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 1.4e-39 167.2 207 41.1
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.4e-39 167.2 206 42.2
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 1.8e-39 166.8 207 39.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.8e-39 166.8 207 41.1
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 1.8e-39 166.8 208 40.9
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 1.8e-39 166.8 207 39.6
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 2.4e-39 166.4 205 41.0
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 2.4e-39 166.4 207 39.6
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 3.1e-39 166.0 207 40.1
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 3.1e-39 166.0 207 39.6
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 3.1e-39 166.0 211 38.9
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 3.1e-39 166.0 208 40.9
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 3.1e-39 166.0 207 40.1
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 4.0e-39 165.6 206 40.8
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 4.0e-39 165.6 207 40.6
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 4.0e-39 165.6 207 40.6
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 5.3e-39 165.2 207 39.6
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 5.3e-39 165.2 207 39.6
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 5.3e-39 165.2 207 40.6
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 5.3e-39 165.2 207 39.6
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 5.3e-39 165.2 207 40.6
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 5.3e-39 165.2 207 42.0
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 6.9e-39 164.9 207 39.6
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 6.9e-39 164.9 207 39.1
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.9e-39 164.9 208 39.4
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 6.9e-39 164.9 208 39.4
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 6.9e-39 164.9 211 39.8
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 9.0e-39 164.5 207 39.1
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 9.0e-39 164.5 207 38.6
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 1.2e-38 164.1 207 40.1
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.2e-38 164.1 207 39.6
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.2e-38 164.1 207 40.1
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 1.5e-38 163.7 207 39.6
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 1.5e-38 163.7 207 38.2
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.5e-38 163.7 208 40.9
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 2.0e-38 163.3 208 39.4
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 2.0e-38 163.3 208 39.4
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.0e-38 163.3 206 40.3
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 2.6e-38 162.9 207 38.6
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.6e-38 162.9 207 40.1
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 4.5e-38 162.2 207 39.6
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 4.5e-38 162.2 207 38.2
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 4.5e-38 162.2 207 38.6
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 4.5e-38 162.2 207 38.2
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 5.8e-38 161.8 207 38.2
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 7.6e-38 161.4 205 39.5
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 1.3e-37 160.6 207 38.6
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 1.3e-37 160.6 207 38.2
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 1.7e-37 160.2 207 38.6
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.7e-37 160.2 207 39.1
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.2e-37 159.8 218 39.0
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 2.2e-37 159.8 209 40.7
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.9e-37 159.5 208 38.0
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 3.8e-37 159.1 188 42.0
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 3.8e-37 159.1 208 39.4
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 3.8e-37 159.1 207 38.2
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 6.5e-37 158.3 207 37.7
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.1e-36 157.5 207 37.2
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.1e-36 157.5 206 36.9
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 7.1e-36 154.8 205 40.5
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.6e-35 153.7 208 38.5
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 1.6e-35 153.7 206 37.9
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 6.0e-35 151.8 175 43.4
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 7.9e-35 151.4 213 38.0
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 7.9e-35 151.4 181 42.0
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.3e-34 150.6 204 36.8
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.0e-34 149.4 227 37.0
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 3.0e-34 149.4 189 39.7
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 5.1e-34 148.7 187 39.6
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 8.7e-34 147.9 227 36.6
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 8.7e-34 147.9 172 43.0
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 1.1e-33 147.5 172 43.0
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 4.3e-33 145.6 172 41.9
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 7.4e-33 144.8 177 40.7
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 9.6e-33 144.4 234 36.3
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 9.6e-33 144.4 188 37.8
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 2.8e-32 142.9 224 35.3
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 4.8e-32 142.1 203 38.9
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 6.2e-32 141.7 241 33.2
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.4e-31 140.6 204 36.3
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 1.5e-30 137.1 190 38.9
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 2.6e-30 136.3 207 36.2
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 2.6e-30 136.3 170 41.2
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 1.0e-29 134.4 167 40.7
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 2.9e-29 132.9 211 36.5
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 3.8e-29 132.5 143 43.4
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 1.1e-28 131.0 147 41.5
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 7.1e-28 128.3 211 36.5
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.6e-27 127.1 201 34.3
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 6.7e-26 121.7 166 38.0
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 4.1e-23 112.5 236 32.2
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 9.0e-23 111.3 132 38.6
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.7e-19 99.8 134 41.8
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 1.4e-18 97.4 207 33.3
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 3.0e-18 96.3 121 40.5
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 2.5e-12 76.6 125 32.0
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 5.5e-12 75.5 137 36.5
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 2.3e-10 70.1 205 28.3
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 1.5e-09 67.4 91 37.4
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 8.2e-08 61.6 75 37.3
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.4e-07 60.8 56 41.1


User provided reference genes

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