Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_26086 Corylus avellana HOM05D002450 ORTHO05D002953 5.7e-63 244.2 134 100.0
Haze_25525 Corylus avellana HOM05D002450 ORTHO05D020169 1.1e-37 160.2 134 75.4
Cfa003416 Carpinus fangiana HOM05D002450 ORTHO05D002953 1.9e-34 149.4 134 71.6
QL12p037610 Quercus lobata HOM05D002450 ORTHO05D002953 4.6e-28 128.3 141 61.0
CiPaw.07G177000 Carya illinoinensis HOM05D002450 ORTHO05D002953 7.8e-28 127.5 134 64.2
CSS0019848 Camellia sinensis var. sinensis HOM05D002450 ORTHO05D002953 1.3e-22 110.2 131 55.0
Dinv39244 Davidia involucrata HOM05D002450 ORTHO05D002953 1.7e-22 109.8 89 70.8
Rhsim07G0221700 Rhododendron simsii HOM05D002450 ORTHO05D002953 1.7e-22 109.8 133 55.6
Ciclev10000177m.g Citrus clementina HOM05D002450 ORTHO05D002953 4.9e-22 108.2 135 56.3
Prupe.5G007400 Prunus persica HOM05D002450 ORTHO05D002953 6.4e-22 107.8 132 53.8
Atru.chr9.2194 Acer truncatum HOM05D002450 ORTHO05D002953 8.3e-22 107.5 136 55.9
MD06G1005900 Malus domestica HOM05D002450 ORTHO05D002953 1.1e-21 107.1 133 54.1
RcHm_v2.0_Chr7g0216291 Rosa chinensis HOM05D002450 ORTHO05D002953 7.1e-21 104.4 133 54.9
FAN08G0311 Fragaria x ananassa HOM05D002450 ORTHO05D002953 9.2e-21 104.0 134 56.0
TAR381G1265 Trochodendron aralioides HOM05D002450 ORTHO05D002953 9.2e-21 104.0 133 53.4
Glyma.17G236600 Glycine max HOM05D002450 ORTHO05D002953 1.2e-20 103.6 133 54.1
Cc10_g05590 Coffea canephora HOM05D002450 ORTHO05D002953 1.6e-20 103.2 133 51.9
Dinv44973 Davidia involucrata HOM05D002450 ORTHO05D002953 2.1e-20 102.8 87 70.1
vmacro22793 Vaccinium macrocarpon HOM05D002450 ORTHO05D002953 6.0e-20 101.3 132 51.5
vmacro22069 Vaccinium macrocarpon HOM05D002450 ORTHO05D002953 1.0e-19 100.5 132 51.5
Actinidia22682 Actinidia chinensis HOM05D002450 ORTHO05D002953 1.7e-19 99.8 120 54.2
CAN.G1054.28 Capsicum annuum HOM05D002450 ORTHO05D002953 1.7e-19 99.8 130 51.5
FAN18G3361 Fragaria x ananassa HOM05D002450 ORTHO05D002953 1.7e-19 99.8 134 54.5
Glyma.14G087700 Glycine max HOM05D002450 ORTHO05D002953 3.0e-19 99.0 133 53.4
GSVIVG01009365001 Vitis vinifera HOM05D002450 ORTHO05D002953 3.0e-19 99.0 132 51.5
FAN04G2208 Fragaria x ananassa HOM05D002450 ORTHO05D002953 3.9e-19 98.6 134 53.7
Thecc.08G091300 Theobroma cacao HOM05D002450 ORTHO05D002953 1.1e-18 97.1 135 52.6
Prupe.6G138300 Prunus persica HOM05D002450 ORTHO05D002953 1.9e-18 96.3 133 50.4
Rhsim06G0060700 Rhododendron simsii HOM05D002450 ORTHO05D002953 3.3e-18 95.5 132 51.5
Lalb_Chr24g0399411 Lupinus albus HOM05D002450 ORTHO05D002953 5.6e-18 94.7 134 50.0
COL.COLO4_28529 Corchorus olitorius HOM05D002450 ORTHO05D002953 9.5e-18 94.0 134 51.5
Lalb_Chr14g0368301 Lupinus albus HOM05D002450 ORTHO05D002953 1.2e-17 93.6 134 48.5
PGSC0003DMG401021510 Solanum tuberosum HOM05D002450 ORTHO05D002953 1.2e-17 93.6 129 50.4
Ca_25258_v3 Cicer arietinum L. HOM05D002450 ORTHO05D002953 2.1e-17 92.8 134 50.7
Duzib093G1995 Durio zibethinus HOM05D002450 ORTHO05D002953 3.6e-17 92.0 116 54.3
Solyc04g078050.3 Solanum lycopersicum HOM05D002450 ORTHO05D002953 3.6e-17 92.0 129 49.6
Sopen04g031640 Solanum pennellii HOM05D002450 ORTHO05D002953 3.6e-17 92.0 129 49.6
Ca_15910_v3 Cicer arietinum L. HOM05D002450 ORTHO05D002953 8.1e-17 90.9 134 50.7
Eucgr.F02266 Eucalyptus grandis HOM05D002450 ORTHO05D002953 1.1e-16 90.5 133 48.9
Nitab4.5_0003228g0010 Nicotiana tabacum HOM05D002450 ORTHO05D002953 1.1e-16 90.5 133 48.1
Potri.002G119900 Populus trichocarpa HOM05D002450 ORTHO05D002953 1.4e-16 90.1 133 48.9
Sc24g0003290 Simmondsia chinensis HOM05D002450 ORTHO05D002953 2.3e-16 89.4 131 49.6
Nitab4.5_0000934g0090 Nicotiana tabacum HOM05D002450 ORTHO05D002953 3.1e-16 89.0 131 48.1
TWI74G0610 Tripterygium wilfordii HOM05D002450 ORTHO05D002953 4.0e-16 88.6 136 48.5
VMungo0647G0877 Vigna mungo HOM05D002450 ORTHO05D002953 4.0e-16 88.6 133 51.1
Lj1g0026999 Lotus japonicus HOM05D002450 ORTHO05D002953 6.8e-16 87.8 134 49.3
Gorai.009G277000 Gossypium raimondii HOM05D002450 ORTHO05D002953 8.9e-16 87.4 134 48.5
Oeu057366.3 Olea europaea HOM05D002450 ORTHO05D002953 1.2e-15 87.0 131 47.3
Psat5g038160 Pisum sativum HOM05D002450 ORTHO05D002953 1.5e-15 86.7 134 47.8
Actinidia10186 Actinidia chinensis HOM05D002450 ORTHO05D002953 2.6e-15 85.9 120 49.2
DCAR_008851 Daucus carota HOM05D002450 ORTHO05D002953 3.4e-15 85.5 133 48.1
Lj5g0004805 Lotus japonicus HOM05D002450 ORTHO05D002953 5.8e-15 84.7 129 51.9
Gohir.D05G265200 Gossypium hirsutum HOM05D002450 ORTHO05D002953 7.6e-15 84.3 116 52.6
TPR.G33705 Trifolium pratense HOM05D002450 ORTHO05D002953 7.6e-15 84.3 134 48.5
Gohir.A05G263000 Gossypium hirsutum HOM05D002450 ORTHO05D002953 9.9e-15 84.0 89 62.9
Gorai.002G132700 Gossypium raimondii HOM05D002450 ORTHO05D002953 9.9e-15 84.0 134 48.5
SGA_v2.0_scaffold14G06941 Striga asiatica HOM05D002450 ORTHO05D002953 9.9e-15 84.0 132 46.2
TAR625G0542 Trochodendron aralioides HOM05D002450 ORTHO05D002953 9.9e-15 84.0 133 47.4
Nn5g30523 Nelumbo nucifera HOM05D002450 ORTHO05D002953 1.7e-14 83.2 133 46.6
AUR62011845 Chenopodium quinoa HOM05D002450 ORTHO05D002953 3.7e-14 82.0 132 47.7
Eucgr.C02521 Eucalyptus grandis HOM05D002450 ORTHO05D002953 4.9e-14 81.6 133 45.1
FvH4_5g25820 Fragaria vesca HOM05D002450 ORTHO05D002953 1.4e-13 80.1 134 48.5
Phvul.001G026300 Phaseolus vulgaris HOM05D002450 ORTHO05D002953 1.9e-13 79.7 107 50.5
Ah.02g112100 Amaranthus hybridus HOM05D002450 ORTHO05D002953 2.4e-13 79.3 131 47.3
PGR031G3734 Punica granatum HOM05D002450 ORTHO05D002953 4.1e-13 78.6 131 45.8
CANSAT54G1944 Cannabis sativa HOM05D002450 ORTHO05D002953 5.4e-13 78.2 142 45.8
Glyma.04G044700 Glycine max HOM05D002450 ORTHO05D002953 7.1e-13 77.8 128 46.1
Sabra02G0094400 Salix brachista HOM05D002450 ORTHO05D002953 7.1e-13 77.8 133 45.1
Glyma.06G045200 Glycine max HOM05D002450 ORTHO05D002953 9.2e-13 77.4 128 46.9
Nitab4.5_0000197g0090 Nicotiana tabacum HOM05D002450 ORTHO05D002953 9.2e-13 77.4 131 45.8
Nn1g04614 Nelumbo nucifera HOM05D002450 ORTHO05D002953 1.2e-12 77.0 132 43.9
Manes.16G088600 Manihot esculenta HOM05D002450 ORTHO05D002953 2.1e-12 76.3 127 47.2
DCAR_012809 Daucus carota HOM05D002450 ORTHO05D002953 3.5e-12 75.5 132 46.2
Lsat_1_v5_gn_4_130920 Lactuca sativa HOM05D002450 ORTHO05D002953 4.6e-12 75.1 135 46.7
TPR.G2904 Trifolium pratense HOM05D002450 ORTHO05D002953 4.6e-12 75.1 134 44.8
EL10Ac2g04298 Beta vulgaris HOM05D002450 ORTHO05D002953 6.0e-12 74.7 132 46.2
FAN13G2461 Fragaria x ananassa HOM05D002450 ORTHO05D002953 7.8e-12 74.3 83 63.9
TWI77G0253 Tripterygium wilfordii HOM05D002450 ORTHO05D002953 7.8e-12 74.3 136 44.9
Cpa.g.sc21.108 Carica papaya HOM05D002450 ORTHO05D002953 1.0e-11 73.9 127 47.2
arahy.Tifrunner.gnm1.ann1.27GD0X Arachis hypogaea HOM05D002450 ORTHO05D002953 1.7e-11 73.2 110 46.4
arahy.Tifrunner.gnm1.ann1.Z5BLZE Arachis hypogaea HOM05D002450 ORTHO05D002953 3.0e-11 72.4 110 45.5
Gohir.D01G108500 Gossypium hirsutum HOM05D002450 ORTHO05D002953 3.0e-11 72.4 89 58.4
arahy.Tifrunner.gnm1.ann1.94F500 Arachis hypogaea HOM05D002450 ORTHO05D002953 3.9e-11 72.0 110 45.5
TPR.G35644 Trifolium pratense HOM05D002450 ORTHO05D002953 3.9e-11 72.0 134 44.0
AUR62024687 Chenopodium quinoa HOM05D002450 ORTHO05D002953 5.1e-11 71.6 132 45.5
Aqoxy2G03346 Aquilegia oxysepala HOM05D002450 ORTHO05D002953 6.6e-11 71.2 135 43.0
Peaxi162Scf00081g01329 Petunia axillaris HOM05D002450 ORTHO05D002953 6.6e-11 71.2 129 43.4
Sed0017090 Sechium edule HOM05D002450 ORTHO05D002953 8.6e-11 70.9 134 44.8
Cpa.g.sc123.18 Carica papaya HOM05D002450 ORTHO05D020169 2.5e-10 69.3 74 58.1
MSTRG.24365 Avicennia marina HOM05D002450 ORTHO05D002953 7.3e-10 67.8 128 43.8
MELO3C003391.2 Cucumis melo HOM05D002450 ORTHO05D002953 1.6e-09 66.6 128 46.9
HPP92_026569 Vanilla planifolia HOM05D002450 ORTHO05D020169 2.1e-09 66.2 111 44.1
Migut.N02766 Erythranthe guttata HOM05D002450 ORTHO05D002953 2.8e-09 65.9 123 43.1
THA.LOC104812586 Tarenaya hassleriana HOM05D002450 ORTHO05D002953 8.1e-09 64.3 130 42.3
CsaV3_3G049350 Cucumis sativus L. HOM05D002450 ORTHO05D002953 1.1e-08 63.9 129 41.9
Carub.0008s0559 Capsella rubella HOM05D002450 ORTHO05D002953 1.4e-08 63.5 130 40.8
CARHR180850 Cardamine hirsuta HOM05D002450 ORTHO05D002953 1.4e-08 63.5 130 40.0
PSO541G0144 Papaver somniferum HOM05D002450 ORTHO05D002953 1.8e-08 63.2 133 39.1
Aa31LG9G13220 Aethionema arabicum HOM05D002450 ORTHO05D002953 3.1e-08 62.4 126 37.3
AT5G43130 Arabidopsis thaliana HOM05D002450 ORTHO05D002953 4.0e-08 62.0 130 40.8
MBI15_g43330_MAGBIO Magnolia biondii HOM05D002450 ORTHO05D002953 4.0e-08 62.0 122 44.3
MBI14_g43560_MAGBIO Magnolia biondii HOM05D002450 ORTHO05D002953 6.8e-08 61.2 135 41.5
PSO675G5640 Papaver somniferum HOM05D002450 ORTHO05D002953 6.8e-08 61.2 124 39.5
Potri.014G018000 Populus trichocarpa HOM05D002450 ORTHO05D002953 6.8e-08 61.2 121 40.5
Aqoxy1G00817 Aquilegia oxysepala HOM05D002450 ORTHO05D002953 1.2e-07 60.5 139 39.6
Sabra14G0011900 Salix brachista HOM05D002450 ORTHO05D002953 1.2e-07 60.5 123 41.5
Sp2g07910 Schrenkiella parvula HOM05D002450 ORTHO05D002953 2.6e-07 59.3 130 41.5
AL8G17530 Arabidopsis lyrata HOM05D002450 ORTHO05D002953 5.8e-07 58.2 131 37.4
RcHm_v2.0_Chr1g0327781 Rosa chinensis HOM05D002450 ORTHO05D002953 5.8e-07 58.2 83 53.0
CDE07G0359 Ceratophyllum demersum HOM05D002450 ORTHO05D002953 7.6e-07 57.8 126 38.1
BcaC06g31721 Brassica carinata HOM05D002450 ORTHO05D002953 2.2e-06 56.2 126 38.1


User provided reference genes

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