Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25740 Corylus avellana HOM05D001040 ORTHO05D017368 7.5e-33 143.3 73 100.0
Haze_25742 Corylus avellana HOM05D001040 ORTHO05D017368 7.5e-33 143.3 73 100.0
Haze_15239 Corylus avellana HOM05D001040 ORTHO05D002795 5.4e-15 84.0 69 71.0
Cfa004171 Carpinus fangiana HOM05D001040 ORTHO05D002795 8.9e-10 66.6 50 78.0
Cpa.g.sc68.35 Carica papaya HOM05D001040 ORTHO05D002795 1.5e-09 65.9 50 74.0
Actinidia18267 Actinidia chinensis HOM05D001040 ORTHO05D002795 2.6e-09 65.1 50 74.0
BcaB03g13046 Brassica carinata HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
BcaB03g14502 Brassica carinata HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
A08p31390 Brassica napus HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
A09p60990 Brassica napus HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
C08p17400 Brassica napus HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
C08p44570 Brassica napus HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
BolC8t49366H Brassica oleracea HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
BolC8t52005H Brassica oleracea HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
BraA08t35062Z Brassica rapa HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
BraA09t41472Z Brassica rapa HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
Sp1g14420 Schrenkiella parvula HOM05D001040 ORTHO05D002795 5.8e-09 63.9 50 76.0
Aa31LG7G720 Aethionema arabicum HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
AL1G28310 Arabidopsis lyrata HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
AT1G16180 Arabidopsis thaliana HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Carub.0001s1594 Capsella rubella HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
CARHR016660 Cardamine hirsuta HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
CiPaw.01G051700 Carya illinoinensis HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Duzib160G0753 Durio zibethinus HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Thhalv10007762m.g Eutrema salsugineum HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Manes.04G098900 Manihot esculenta HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Manes.11G070700 Manihot esculenta HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Peaxi162Scf00314g00936 Petunia axillaris HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Potri.003G186500 Populus trichocarpa HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 74.0
PGR102G0996 Punica granatum HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
THA.LOC104808162 Tarenaya hassleriana HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Thecc.06G133600 Theobroma cacao HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
GSVIVG01016078001 Vitis vinifera HOM05D001040 ORTHO05D002795 7.5e-09 63.5 50 76.0
Gohir.A06G194900 Gossypium hirsutum HOM05D001040 ORTHO05D002795 9.8e-09 63.2 50 74.0
Gohir.D06G202600 Gossypium hirsutum HOM05D001040 ORTHO05D002795 9.8e-09 63.2 50 74.0
Gorai.010G236500 Gossypium raimondii HOM05D001040 ORTHO05D002795 9.8e-09 63.2 50 74.0
CAN.G1008.15 Capsicum annuum HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
Migut.I00633 Erythranthe guttata HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
Nitab4.5_0005437g0010 Nicotiana tabacum HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
Oeu051548.1 Olea europaea HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
Rhsim08G0202300 Rhododendron simsii HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
SalBow7G0298 Salvia bowleyana HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
Solyc03g117770.3 Solanum lycopersicum HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
Sopen03g036680 Solanum pennellii HOM05D001040 ORTHO05D002795 1.3e-08 62.8 50 74.0
MSTRG.22837 Avicennia marina HOM05D001040 ORTHO05D002795 1.7e-08 62.4 50 72.0
CDE05G2163 Ceratophyllum demersum HOM05D001040 ORTHO05D017368 1.7e-08 62.4 50 70.0
Cc04_g05390 Coffea canephora HOM05D001040 ORTHO05D002795 1.7e-08 62.4 50 70.0
COL.COLO4_30900 Corchorus olitorius HOM05D001040 ORTHO05D002795 1.7e-08 62.4 50 74.0
Eucgr.F03990 Eucalyptus grandis HOM05D001040 ORTHO05D002795 1.7e-08 62.4 50 74.0
PGSC0003DMG400014159 Solanum tuberosum HOM05D001040 ORTHO05D002795 1.7e-08 62.4 50 72.0
Atru.chr1.2820 Acer truncatum HOM05D001040 ORTHO05D002795 2.2e-08 62.0 50 72.0
ClCG09G003420 Citrullus lanatus HOM05D001040 ORTHO05D002795 2.2e-08 62.0 50 72.0
MELO3C023477.2 Cucumis melo HOM05D001040 ORTHO05D002795 2.2e-08 62.0 50 72.0
CsaV3_7G031800 Cucumis sativus L. HOM05D001040 ORTHO05D002795 2.2e-08 62.0 50 72.0
MD17G1228400 Malus domestica HOM05D001040 ORTHO05D002795 2.2e-08 62.0 50 72.0
Prupe.3G105800 Prunus persica HOM05D001040 ORTHO05D002795 2.2e-08 62.0 50 72.0
TWI79G1729 Tripterygium wilfordii HOM05D001040 ORTHO05D002795 2.2e-08 62.0 50 72.0
CANSAT64G1050 Cannabis sativa HOM05D001040 ORTHO05D002795 2.9e-08 61.6 50 72.0
CDE02G3476 Ceratophyllum demersum HOM05D001040 ORTHO05D002795 2.9e-08 61.6 50 70.0
Duzib235G1108 Durio zibethinus HOM05D001040 ORTHO05D002795 2.9e-08 61.6 50 74.0
Lj5A82T34 Lonicera japonica HOM05D001040 ORTHO05D002795 2.9e-08 61.6 50 72.0
Nitab4.5_0004194g0020 Nicotiana tabacum HOM05D001040 ORTHO05D002795 2.9e-08 61.6 50 72.0
QL05p081581 Quercus lobata HOM05D001040 ORTHO05D002795 2.9e-08 61.6 50 72.0
SalBow1G8548 Salvia bowleyana HOM05D001040 ORTHO05D002795 2.9e-08 61.6 67 59.7
Dinv21439 Davidia involucrata HOM05D001040 ORTHO05D002795 3.7e-08 61.2 61 63.9
TAR625G0041 Trochodendron aralioides HOM05D001040 ORTHO05D002795 3.7e-08 61.2 61 65.6
Dinv23263 Davidia involucrata HOM05D001040 ORTHO05D002795 4.9e-08 60.8 61 63.9
Sed0012180 Sechium edule HOM05D001040 ORTHO05D002795 4.9e-08 60.8 50 70.0
Sed0012929 Sechium edule HOM05D001040 ORTHO05D002795 4.9e-08 60.8 50 70.0
EL10Ac8g19427 Beta vulgaris HOM05D001040 ORTHO05D002795 6.4e-08 60.5 50 70.0
Gohir.A06G141800 Gossypium hirsutum HOM05D001040 ORTHO05D002795 6.4e-08 60.5 50 72.0
Gorai.010G170100 Gossypium raimondii HOM05D001040 ORTHO05D002795 6.4e-08 60.5 50 72.0
HanXRQChr04g0100001 Helianthus annuus HOM05D001040 ORTHO05D002795 6.4e-08 60.5 50 68.0
Lj1g0014351 Lotus japonicus HOM05D001040 ORTHO05D002795 6.4e-08 60.5 50 68.0
Lalb_Chr19g0125621 Lupinus albus HOM05D001040 ORTHO05D002795 6.4e-08 60.5 50 70.0
Sabra03G0136600 Salix brachista HOM05D001040 ORTHO05D002795 6.4e-08 60.5 61 63.9
Hund22397 Selenicereus undatus HOM05D001040 ORTHO05D002795 6.4e-08 60.5 50 70.0
Actinidia25489 Actinidia chinensis HOM05D001040 ORTHO05D002795 8.3e-08 60.1 50 72.0
BcaB05g22309 Brassica carinata HOM05D001040 ORTHO05D017368 8.3e-08 60.1 50 72.0
Lsat_1_v5_gn_1_30761 Lactuca sativa HOM05D001040 ORTHO05D002795 8.3e-08 60.1 50 70.0
Oeu003114.2 Olea europaea HOM05D001040 ORTHO05D002795 8.3e-08 60.1 50 70.0
Lj9A490T31 Lonicera japonica HOM05D001040 ORTHO05D002795 1.1e-07 59.7 50 70.0
MBI14_g16431_MAGBIO Magnolia biondii HOM05D001040 ORTHO05D002795 1.1e-07 59.7 67 61.2
Sc12g0008600 Simmondsia chinensis HOM05D001040 ORTHO05D002795 1.1e-07 59.7 50 68.0
Ca_07512_v3 Cicer arietinum L. HOM05D001040 ORTHO05D002795 1.4e-07 59.3 50 68.0
Gohir.D06G145900 Gossypium hirsutum HOM05D001040 ORTHO05D002795 1.4e-07 59.3 50 70.0
TPR.G23279 Trifolium pratense HOM05D001040 ORTHO05D002795 1.4e-07 59.3 50 68.0
DCAR_025612 Daucus carota HOM05D001040 ORTHO05D002795 1.9e-07 58.9 50 68.0
ECA247G4057 Erigeron canadensis HOM05D001040 ORTHO05D002795 1.9e-07 58.9 61 62.3
PSO170G5220 Papaver somniferum HOM05D001040 ORTHO05D002795 1.9e-07 58.9 61 62.3
Phvul.008G126100 Phaseolus vulgaris HOM05D001040 ORTHO05D002795 1.9e-07 58.9 50 70.0
VMungo1383G2383 Vigna mungo HOM05D001040 ORTHO05D002795 1.9e-07 58.9 50 70.0
ATR0580G307 Amborella trichopoda HOM05D001040 ORTHO05D002795 2.4e-07 58.5 61 63.9
arahy.Tifrunner.gnm1.ann1.A9I7DL Arachis hypogaea HOM05D001040 ORTHO05D002795 2.4e-07 58.5 50 68.0
arahy.Tifrunner.gnm1.ann1.D93ZMI Arachis hypogaea HOM05D001040 ORTHO05D002795 2.4e-07 58.5 50 68.0
arahy.Tifrunner.gnm1.ann1.FLE44X Arachis hypogaea HOM05D001040 ORTHO05D002795 2.4e-07 58.5 50 68.0
arahy.Tifrunner.gnm1.ann1.S6TXJF Arachis hypogaea HOM05D001040 ORTHO05D002795 2.4e-07 58.5 50 68.0
Glyma.08G353600 Glycine max HOM05D001040 ORTHO05D002795 2.4e-07 58.5 50 68.0
Glyma.18G170200 Glycine max HOM05D001040 ORTHO05D002795 2.4e-07 58.5 50 68.0
Sabra01G0026700 Salix brachista HOM05D001040 ORTHO05D002795 2.4e-07 58.5 61 62.3
Psat3g145560 Pisum sativum HOM05D001040 ORTHO05D002795 3.2e-07 58.2 50 68.0
PSO017G7354 Papaver somniferum HOM05D001040 ORTHO05D002795 4.1e-07 57.8 61 60.7
AUR62002670 Chenopodium quinoa HOM05D001040 ORTHO05D002795 7.0e-07 57.0 50 68.0
SEGI_03059 Sequoiadendron giganteum HOM05D001040 ORTHO05D002795 1.2e-06 56.2 50 62.0
TAR383G0275 Trochodendron aralioides HOM05D001040 ORTHO05D002795 1.2e-06 56.2 61 60.7
HanXRQChr02g0033691 Helianthus annuus HOM05D001040 ORTHO05D002795 2.7e-06 55.1 61 59.0
Potri.001G038100 Populus trichocarpa HOM05D001040 ORTHO05D002795 2.7e-06 55.1 61 59.0
Hma1.2p1_0338F.1_g129660 Hydrangea macrophylla HOM05D001040 ORTHO05D002795 3.5e-06 54.7 61 57.4
Nn8g40136 Nelumbo nucifera HOM05D001040 ORTHO05D002795 4.6e-06 54.3 61 59.0
Aqoxy7G02505 Aquilegia oxysepala HOM05D001040 ORTHO05D002795 6.0e-06 53.9 61 57.4
Ciclev10025720m.g Citrus clementina HOM05D001040 ORTHO05D002795 6.0e-06 53.9 61 59.0
PSO017G3324 Papaver somniferum HOM05D006613 ORTHO05D008365 6.0e-06 53.9 50 60.0
arahy.Tifrunner.gnm1.ann1.5PJ38T Arachis hypogaea HOM05D001040 ORTHO05D002795 7.8e-06 53.5 61 55.7
SEGI_36941 Sequoiadendron giganteum HOM05D001040 ORTHO05D002795 7.8e-06 53.5 53 54.7


User provided reference genes

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