Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 1.0e-227 793.1 405 100.0
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 2.4e-197 692.2 359 98.3
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 7.3e-162 574.3 359 81.6
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 2.8e-161 572.4 358 80.4
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 4.0e-160 568.5 358 80.7
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 3.4e-159 565.5 355 80.6
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 1.7e-158 563.1 358 81.0
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 2.9e-158 562.4 358 80.4
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 2.4e-157 559.3 358 79.9
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 3.2e-157 558.9 359 78.3
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 2.7e-156 555.8 355 80.0
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 3.5e-156 555.4 358 78.5
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 1.3e-155 553.5 355 79.7
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 1.3e-155 553.5 355 79.7
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 2.3e-155 552.7 355 79.7
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 3.9e-155 552.0 358 78.8
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 5.0e-155 551.6 355 79.2
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 3.1e-152 542.3 358 76.0
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 4.0e-152 542.0 355 78.0
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 4.0e-152 542.0 356 77.0
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 1.9e-149 533.1 358 74.0
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 2.4e-149 532.7 352 75.6
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 1.2e-148 530.4 358 75.7
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 2.1e-148 529.6 358 75.7
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 6.0e-148 528.1 356 74.7
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 1.1e-146 523.9 360 71.7
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 1.1e-146 523.9 354 76.0
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 7.3e-146 521.2 358 71.5
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 1.6e-145 520.0 364 72.5
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 1.1e-144 517.3 364 72.0
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 2.4e-144 516.2 358 73.5
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 4.0e-144 515.4 354 73.2
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 6.8e-144 514.6 386 66.6
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 6.8e-144 514.6 360 72.5
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 6.4e-142 508.1 359 73.8
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 1.4e-141 506.9 375 70.7
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 1.9e-141 506.5 361 72.0
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 1.9e-141 506.5 361 72.0
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 2.4e-141 506.1 358 72.1
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 3.2e-141 505.8 356 72.8
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 7.8e-140 501.1 354 70.6
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 3.9e-139 498.8 358 69.6
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 6.6e-139 498.0 348 71.3
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 8.7e-139 497.7 358 71.2
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 8.7e-139 497.7 354 69.8
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 2.5e-138 496.1 358 73.7
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 5.6e-138 495.0 364 69.5
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 2.1e-137 493.0 355 69.9
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 6.2e-137 491.5 351 69.8
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 1.1e-136 490.7 358 71.8
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 1.1e-136 490.7 353 71.4
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 6.9e-136 488.0 360 66.7
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 9.0e-136 487.6 358 71.2
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 3.4e-135 485.7 358 70.7
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 5.8e-135 485.0 358 70.4
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 7.6e-135 484.6 371 70.1
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 1.3e-134 483.8 359 68.2
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 2.2e-134 483.0 358 70.4
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 6.4e-134 481.5 360 66.4
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 3.2e-133 479.2 359 67.7
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 4.2e-133 478.8 359 67.7
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 5.4e-133 478.4 358 70.7
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 5.4e-133 478.4 358 70.9
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 1.2e-132 477.2 354 70.6
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 2.1e-132 476.5 359 67.4
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 4.6e-132 475.3 359 67.4
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 6.0e-132 474.9 357 68.1
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 2.3e-131 473.0 364 68.1
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 6.6e-131 471.5 359 66.9
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 6.6e-131 471.5 356 67.1
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 4.3e-130 468.8 356 67.7
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 5.6e-130 468.4 358 67.0
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 7.3e-130 468.0 363 70.2
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 2.1e-129 466.5 358 66.5
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 8.1e-129 464.5 354 68.9
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 8.1e-129 464.5 358 65.9
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 2.4e-128 463.0 360 69.4
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 6.9e-128 461.5 354 66.7
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 1.2e-127 460.7 359 65.5
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 2.6e-127 459.5 358 65.6
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 2.6e-127 459.5 358 65.6
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 2.6e-127 459.5 358 65.6
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 4.5e-127 458.8 358 65.4
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 7.6e-127 458.0 358 65.1
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 9.9e-127 457.6 358 65.1
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 3.8e-126 455.7 358 65.1
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 4.9e-126 455.3 366 66.9
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 6.4e-126 454.9 358 65.1
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 4.2e-125 452.2 359 65.7
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 4.2e-125 452.2 354 67.5
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 5.4e-125 451.8 356 66.9
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 1.6e-124 450.3 358 64.5
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 2.1e-124 449.9 354 66.1
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 3.5e-124 449.1 359 65.5
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 4.3e-122 442.2 354 66.1
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 2.1e-121 439.9 354 65.8
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 2.0e-119 433.3 354 63.6
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 9.9e-119 431.0 329 69.3
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 6.0e-116 421.8 358 62.8
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 3.1e-112 409.5 354 62.4
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 3.4e-111 406.0 359 60.2
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 7.6e-111 404.8 358 60.3
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 1.8e-107 393.7 354 58.8
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 1.7e-102 377.1 358 51.7
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.2e-101 372.5 358 51.1
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.3e-97 360.9 347 53.0
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 4.0e-75 286.2 335 43.9
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 2.2e-73 280.4 759 31.0
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 1.4e-72 277.7 358 44.1
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 2.7e-71 273.5 358 42.7
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.3e-67 260.4 267 47.9
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 6.3e-65 252.3 239 59.0
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 4.9e-49 199.5 278 42.4
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.0e-46 191.8 221 51.1
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 5.0e-46 189.5 121 77.7
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 6.6e-38 162.5 229 38.4
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 2.4e-24 117.5 258 31.0
TAR376G0117 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.2e-23 115.2 140 50.7
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 6.6e-22 109.4 95 61.1
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 5.3e-19 99.8 209 32.1
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.7e-15 87.4 63 71.4
TAR625G0866 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.4e-08 64.3 45 68.9


User provided reference genes

Program Settings