Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 1.2e-182 643.3 377 100.0
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 8.4e-128 461.1 251 97.6
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.1e-127 460.7 251 97.2
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 8.1e-99 364.8 240 79.2
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 3.0e-85 319.7 239 72.4
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 9.7e-84 314.7 250 70.0
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.6e-83 313.9 200 86.5
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 3.7e-83 312.8 250 69.6
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 5.3e-82 308.9 248 68.1
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 6.9e-82 308.5 251 69.3
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 9.0e-82 308.1 249 67.5
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 3.4e-81 306.2 242 68.2
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 4.5e-81 305.8 250 68.0
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 5.9e-81 305.4 249 67.9
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 7.7e-81 305.1 249 68.7
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 7.7e-81 305.1 238 68.9
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 1.0e-80 304.7 249 68.7
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.0e-80 304.7 247 68.8
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 5.0e-80 302.4 257 65.4
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 6.5e-80 302.0 248 66.9
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 6.5e-80 302.0 249 66.7
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 8.5e-80 301.6 257 65.4
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 8.5e-80 301.6 249 64.7
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.5e-79 300.1 256 65.2
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 4.2e-79 299.3 238 67.6
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 4.2e-79 299.3 257 64.6
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 5.5e-79 298.9 250 67.6
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 4.6e-78 295.8 249 64.3
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 6.1e-78 295.4 252 65.5
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 7.9e-78 295.0 239 66.9
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 2.3e-77 293.5 250 66.0
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 3.0e-77 293.1 251 65.3
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 8.8e-77 291.6 245 66.1
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 8.8e-77 291.6 232 67.2
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 3.3e-76 289.7 251 64.1
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 5.7e-76 288.9 253 66.0
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 7.4e-76 288.5 255 66.7
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 1.7e-75 287.3 252 62.3
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 2.2e-75 287.0 250 63.2
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 2.2e-75 287.0 230 66.1
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 2.8e-75 286.6 232 69.8
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 3.7e-75 286.2 250 64.4
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 4.8e-75 285.8 249 66.3
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 6.3e-75 285.4 230 66.1
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 2.4e-74 283.5 235 66.4
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.1e-74 283.1 233 66.5
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 4.1e-74 282.7 227 67.8
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 1.2e-73 281.2 256 64.8
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 1.2e-73 281.2 249 62.2
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 2.0e-73 280.4 253 65.2
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 2.6e-73 280.0 251 62.2
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 3.4e-73 279.6 232 64.7
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 4.5e-73 279.3 249 63.5
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 7.7e-73 278.5 257 63.8
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 1.0e-72 278.1 238 66.0
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 1.7e-72 277.3 244 63.5
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 6.5e-72 275.4 250 64.8
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 1.9e-71 273.9 247 64.4
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 5.5e-71 272.3 249 61.0
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.6e-70 270.8 249 61.0
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 6.1e-70 268.9 238 63.4
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 7.9e-70 268.5 238 64.7
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 7.9e-70 268.5 238 64.7
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 6.7e-69 265.4 248 62.5
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 6.7e-69 265.4 247 63.2
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 1.5e-68 264.2 250 60.8
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 3.3e-68 263.1 251 59.4
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 4.4e-68 262.7 249 60.2
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 5.7e-68 262.3 247 61.1
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 2.8e-67 260.0 240 63.3
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 3.7e-67 259.6 253 60.1
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 6.3e-67 258.8 248 60.1
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 1.1e-66 258.1 258 55.8
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 1.1e-66 258.1 251 58.6
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 1.1e-66 258.1 247 60.7
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.8e-66 257.3 249 59.0
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.2e-65 254.6 255 54.9
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 2.0e-65 253.8 255 54.5
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 2.0e-65 253.8 228 63.2
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 3.5e-65 253.1 257 54.5
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 5.9e-65 252.3 244 59.8
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 5.9e-65 252.3 231 61.9
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 7.7e-65 251.9 251 57.4
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.0e-64 251.5 239 61.1
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.3e-64 251.1 179 71.5
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.3e-64 251.1 247 59.9
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 2.9e-64 250.0 247 59.5
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 3.8e-64 249.6 254 56.7
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 5.0e-64 249.2 251 55.8
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 6.5e-64 248.8 258 53.1
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 1.5e-63 247.7 238 60.5
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 9.4e-63 245.0 248 54.0
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.7e-62 243.4 258 52.3
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 2.3e-61 240.4 256 53.5
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.0e-61 240.0 250 53.6
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 4.0e-61 239.6 247 56.7
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.5e-60 237.7 251 56.2
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 3.3e-60 236.5 258 52.3
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 7.5e-60 235.3 248 54.8
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 9.7e-60 235.0 252 52.8
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 9.7e-60 235.0 252 52.8
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 4.1e-58 229.6 257 50.6
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 2.0e-57 227.3 249 50.2
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 2.0e-57 227.3 225 59.6
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 1.6e-54 217.6 258 49.6
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 1.2e-52 211.5 251 48.6
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 4.4e-52 209.5 251 48.2
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 4.4e-52 209.5 251 48.2
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 1.7e-51 207.6 253 48.6
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 1.4e-50 204.5 128 82.0
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 5.4e-50 202.6 252 47.2
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 1.2e-49 201.4 191 62.8
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 1.3e-48 198.0 253 46.2
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 1.2e-41 174.9 180 57.8
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 7.5e-36 155.6 124 62.1
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 6.4e-35 152.5 134 64.2
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 1.1e-31 141.7 251 41.4
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 2.4e-26 124.0 130 54.6
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 9.2e-26 122.1 195 39.0
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 5.0e-24 116.3 75 78.7
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 2.8e-22 110.5 181 40.9
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 1.1e-18 98.6 79 70.9
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 2.4e-18 97.4 97 55.7
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 3.2e-18 97.1 131 46.6
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 7.8e-17 92.4 87 55.2
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 7.3e-15 85.9 143 42.0
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 6.2e-14 82.8 63 66.7
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 7.1e-10 69.3 117 40.2
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 3.5e-09 67.0 83 48.2
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 2.5e-07 60.8 62 56.5


User provided reference genes

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