Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 2.8e-194 681.8 354 100.0
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 3.0e-172 608.6 355 92.4
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 6.4e-154 547.7 353 83.9
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 2.0e-152 542.7 354 83.1
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 1.5e-147 526.6 355 80.3
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 1.6e-144 516.5 355 77.7
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 3.9e-143 511.9 352 79.5
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 2.8e-141 505.8 351 77.5
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 6.2e-141 504.6 350 77.7
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 2.0e-139 499.6 350 77.1
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 1.3e-138 496.9 345 78.0
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.7e-138 496.5 354 76.0
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 6.4e-138 494.6 350 76.3
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 8.4e-138 494.2 351 76.9
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.1e-137 493.8 348 76.4
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 1.9e-137 493.0 373 73.2
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 1.6e-136 490.0 351 75.8
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 2.7e-136 489.2 344 77.3
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 3.5e-136 488.8 342 77.5
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.5e-136 488.8 346 76.0
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 4.6e-136 488.4 340 79.4
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 6.0e-136 488.0 351 75.8
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 1.7e-135 486.5 345 77.1
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 5.6e-134 481.5 344 75.6
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 9.6e-134 480.7 343 76.1
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 1.6e-133 479.9 348 74.1
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 2.8e-133 479.2 336 77.7
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 6.2e-133 478.0 346 74.9
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 1.8e-132 476.5 333 76.6
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 4.0e-132 475.3 341 75.7
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 5.2e-132 474.9 345 73.9
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 9.0e-132 474.2 343 74.6
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 1.2e-131 473.8 344 75.6
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 1.5e-131 473.4 342 74.9
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 9.9e-131 470.7 343 74.9
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 1.7e-130 469.9 343 73.8
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 2.9e-130 469.2 342 75.7
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 4.9e-130 468.4 345 73.0
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 1.1e-129 467.2 366 71.3
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 1.1e-129 467.2 353 72.5
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 1.4e-129 466.8 344 75.3
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 2.4e-129 466.1 415 64.8
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 3.2e-129 465.7 341 74.2
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 9.3e-129 464.2 346 73.1
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 3.5e-128 462.2 339 74.6
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 7.8e-128 461.1 326 77.0
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 5.1e-127 458.4 347 71.8
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 3.3e-126 455.7 341 72.4
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 3.3e-126 455.7 351 70.7
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 4.3e-126 455.3 342 72.2
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 4.3e-126 455.3 342 71.3
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.8e-125 451.8 350 71.1
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 8.1e-125 451.1 346 71.7
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.1e-124 450.7 337 72.1
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 1.1e-124 450.7 345 71.9
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.8e-124 449.9 346 71.4
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 2.4e-124 449.5 340 71.5
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 2.4e-124 449.5 340 71.5
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 2.4e-124 449.5 325 76.0
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 4.0e-124 448.7 340 71.2
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 5.3e-124 448.4 343 71.4
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 6.9e-124 448.0 340 71.2
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 6.9e-124 448.0 344 70.6
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 9.0e-124 447.6 343 73.8
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 1.2e-123 447.2 358 70.4
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 1.2e-123 447.2 323 75.5
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 3.4e-123 445.7 340 71.2
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 3.4e-123 445.7 341 71.3
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 3.4e-123 445.7 341 71.3
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 3.4e-123 445.7 342 71.1
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 7.6e-123 444.5 341 71.0
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 2.2e-122 443.0 340 70.3
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 2.9e-122 442.6 340 71.2
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 3.8e-122 442.2 347 70.6
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 3.8e-122 442.2 340 71.8
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 1.1e-121 440.7 280 83.2
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 1.4e-121 440.3 342 71.3
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 2.4e-121 439.5 341 71.6
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 9.3e-121 437.6 368 67.9
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 1.6e-120 436.8 349 70.2
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.6e-120 436.8 345 70.1
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 3.5e-120 435.6 356 65.4
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 1.0e-119 434.1 343 70.0
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 1.3e-119 433.7 326 73.3
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 6.7e-119 431.4 372 66.1
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 2.8e-117 426.0 370 65.1
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 8.1e-117 424.5 306 74.5
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 1.4e-116 423.7 319 70.2
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 8.4e-114 414.5 317 69.4
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 1.9e-113 413.3 320 70.3
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 3.9e-111 405.6 342 66.7
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 5.1e-111 405.2 320 69.4
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 5.6e-110 401.7 306 71.9
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 2.6e-107 392.9 258 82.2
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 5.8e-107 391.7 281 74.4
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 7.1e-105 384.8 273 75.1
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.6e-104 383.6 307 67.8
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 4.6e-104 382.1 340 62.4
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 6.7e-103 378.3 302 69.2
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 5.3e-100 368.6 343 60.9
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 8.5e-98 361.3 305 66.6
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 4.2e-97 359.0 274 70.1
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 7.9e-96 354.8 306 64.4
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 1.3e-93 347.4 306 62.1
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 9.1e-92 341.3 254 70.9
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 2.6e-91 339.7 231 78.8
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 1.0e-90 337.8 198 87.4
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 1.9e-89 333.6 355 54.6
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 7.2e-89 331.6 204 83.3
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.6e-88 330.5 253 73.5
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.1e-86 324.3 225 78.2
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 7.0e-84 315.1 314 54.8
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 1.7e-74 283.9 286 54.9
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 1.2e-72 277.7 203 73.4
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.5e-67 259.6 213 67.1
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 2.9e-66 256.5 202 70.8
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 1.9e-65 253.8 175 78.3
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 3.5e-59 233.0 316 43.0
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 4.4e-54 216.1 152 77.0
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 3.4e-46 189.9 144 72.2
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 1.9e-41 174.1 295 40.0
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 1.9e-28 131.0 92 72.8
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 5.4e-28 129.4 103 68.0
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 1.1e-23 115.2 99 62.6
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.4e-23 114.8 90 65.6
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 5.2e-23 112.8 99 63.6
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 8.4e-21 105.5 83 67.5
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.4e-20 104.8 61 83.6
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.4e-20 104.8 62 83.9
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.4e-20 104.8 118 56.8
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.4e-20 104.0 62 85.5
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.4e-20 102.8 62 85.5
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.2e-19 101.7 253 34.8
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.2e-16 91.7 56 83.9
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.6e-16 91.3 55 85.5
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 2.4e-15 87.4 64 68.8
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 3.2e-12 77.0 105 43.8
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 3.2e-12 77.0 87 48.3
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 5.1e-10 69.7 91 42.9
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 1.1e-09 68.6 42 78.6
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 2.5e-09 67.4 37 83.8
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 9.6e-09 65.5 40 80.0
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 1.6e-08 64.7 35 88.6
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 1.6e-08 64.7 35 88.6
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 6.2e-08 62.8 39 82.1
Rhsim07G0166700 Rhododendron simsii HOM05D005156 ORTHO05D050672 7.6e-06 55.8 69 47.8


User provided reference genes

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