Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22764 Corylus avellana HOM05D005066 ORTHO05D006138 1.4e-130 469.5 223 100.0
Cfa014063 Carpinus fangiana HOM05D005066 ORTHO05D006138 3.2e-127 458.4 224 98.2
CiPaw.07G139500 Carya illinoinensis HOM05D005066 ORTHO05D006138 7.9e-118 427.2 223 90.6
COL.COLO4_03999 Corchorus olitorius HOM05D005066 ORTHO05D006138 6.3e-115 417.5 223 87.9
Duzib093G2109 Durio zibethinus HOM05D005066 ORTHO05D006138 8.2e-115 417.2 223 87.4
Prupe.1G355000 Prunus persica HOM05D005066 ORTHO05D006138 1.4e-114 416.4 223 87.4
MD15G1002700 Malus domestica HOM05D005066 ORTHO05D006138 6.9e-114 414.1 223 87.0
Gohir.A05G254700 Gossypium hirsutum HOM05D005066 ORTHO05D006138 1.5e-113 412.9 223 86.1
Gorai.009G267800 Gossypium raimondii HOM05D005066 ORTHO05D006138 2.6e-113 412.1 223 85.7
MD08G1003000 Malus domestica HOM05D005066 ORTHO05D006138 3.4e-113 411.8 223 86.5
Manes.18G005800 Manihot esculenta HOM05D005066 ORTHO05D006138 7.7e-113 410.6 223 86.1
Gohir.D05G256300 Gossypium hirsutum HOM05D005066 ORTHO05D006138 1.7e-112 409.5 223 85.2
TWI36G1160 Tripterygium wilfordii HOM05D005066 ORTHO05D006138 2.2e-112 409.1 223 84.3
Potri.005G249800 Populus trichocarpa HOM05D005066 ORTHO05D006138 6.5e-112 407.5 223 84.3
Thecc.08G057800 Theobroma cacao HOM05D005066 ORTHO05D006138 1.1e-111 406.8 223 85.7
Sabra05G0193300 Salix brachista HOM05D005066 ORTHO05D006138 2.5e-111 405.6 223 83.4
THA.LOC104813757 Tarenaya hassleriana HOM05D005066 ORTHO05D006138 2.5e-111 405.6 223 84.3
BcaB07g32052 Brassica carinata HOM05D005066 ORTHO05D006138 7.2e-111 404.1 223 84.3
vmacro21822 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 2.1e-110 402.5 223 83.9
AT1G20540 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 7.9e-110 400.6 223 83.4
Cpa.g.sc26.207 Carica papaya HOM05D005066 ORTHO05D006138 7.9e-110 400.6 223 82.5
RcHm_v2.0_Chr6g0304181 Rosa chinensis HOM05D005066 ORTHO05D006138 7.9e-110 400.6 223 84.8
AL1G33470 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 1.0e-109 400.2 223 83.9
Rhsim06G0007900 Rhododendron simsii HOM05D005066 ORTHO05D006138 1.0e-109 400.2 223 83.4
Dinv31933 Davidia involucrata HOM05D005066 ORTHO05D006138 1.4e-109 399.8 223 85.2
A06p16540 Brassica napus HOM05D005066 ORTHO05D006138 3.0e-109 398.7 223 83.0
BraA06t24760Z Brassica rapa HOM05D005066 ORTHO05D006138 3.0e-109 398.7 223 83.0
Ciclev10001617m.g Citrus clementina HOM05D005066 ORTHO05D006138 3.9e-109 398.3 232 81.5
Eucgr.F03549 Eucalyptus grandis HOM05D005066 ORTHO05D006138 3.9e-109 398.3 223 81.2
FAN20G0881 Fragaria x ananassa HOM05D005066 ORTHO05D006138 3.9e-109 398.3 223 84.8
BcaC05g25960 Brassica carinata HOM05D005066 ORTHO05D006138 6.7e-109 397.5 223 83.0
C05p19110 Brassica napus HOM05D005066 ORTHO05D006138 6.7e-109 397.5 223 83.0
BolC5t30611H Brassica oleracea HOM05D005066 ORTHO05D006138 6.7e-109 397.5 223 83.0
Thhalv10008062m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 6.7e-109 397.5 223 83.0
GSVIVG01008680001 Vitis vinifera HOM05D005066 ORTHO05D006138 6.7e-109 397.5 223 83.0
CSS0029951 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 8.8e-109 397.1 223 83.9
FAN15G0307 Fragaria x ananassa HOM05D005066 ORTHO05D006138 8.8e-109 397.1 223 84.3
Sp1g18250 Schrenkiella parvula HOM05D005066 ORTHO05D006138 8.8e-109 397.1 223 82.1
Lj4C805G13 Lonicera japonica HOM05D005066 ORTHO05D006138 2.0e-108 396.0 223 82.5
Lalb_Chr23g0265821 Lupinus albus HOM05D005066 ORTHO05D006138 2.0e-108 396.0 223 82.5
Peaxi162Scf00893g00433 Petunia axillaris HOM05D005066 ORTHO05D006138 2.0e-108 396.0 220 81.8
FvH4_2g37550 Fragaria vesca HOM05D005066 ORTHO05D006138 3.3e-108 395.2 223 83.9
CANSAT25G3513 Cannabis sativa HOM05D005066 ORTHO05D006138 4.3e-108 394.8 223 83.4
PGR031G0259 Punica granatum HOM05D005066 ORTHO05D006138 4.3e-108 394.8 223 80.7
Nitab4.5_0000588g0150 Nicotiana tabacum HOM05D005066 ORTHO05D006138 5.7e-108 394.4 220 81.4
Oeu011330.2 Olea europaea HOM05D005066 ORTHO05D006138 7.4e-108 394.0 223 82.5
CsaV3_6G031630 Cucumis sativus L. HOM05D005066 ORTHO05D006138 9.7e-108 393.7 224 81.7
Hund05118 Selenicereus undatus HOM05D005066 ORTHO05D006138 1.3e-107 393.3 223 83.0
Potri.002G011200 Populus trichocarpa HOM05D005066 ORTHO05D006138 1.7e-107 392.9 225 80.4
Migut.C00955 Erythranthe guttata HOM05D005066 ORTHO05D006138 3.7e-107 391.7 222 80.6
MELO3C026544.2 Cucumis melo HOM05D005066 ORTHO05D006138 4.8e-107 391.3 224 81.7
Carub.0001s2001 Capsella rubella HOM05D005066 ORTHO05D006138 1.4e-106 389.8 223 80.7
Hma1.2p1_0507F.1_g168410 Hydrangea macrophylla HOM05D005066 ORTHO05D006138 1.4e-106 389.8 223 80.7
Aa31LG7G4800 Aethionema arabicum HOM05D005066 ORTHO05D006138 1.8e-106 389.4 223 81.2
Cc10_g00720 Coffea canephora HOM05D005066 ORTHO05D006138 3.1e-106 388.7 222 81.5
Lsat_1_v5_gn_2_6481 Lactuca sativa HOM05D005066 ORTHO05D006138 3.1e-106 388.7 223 81.2
Sed0022458 Sechium edule HOM05D005066 ORTHO05D006138 9.1e-106 387.1 224 80.8
Ca_15439_v3 Cicer arietinum L. HOM05D005066 ORTHO05D006138 1.5e-105 386.3 223 80.7
arahy.Tifrunner.gnm1.ann1.76XKSK Arachis hypogaea HOM05D005066 ORTHO05D006138 5.9e-105 384.4 223 79.4
arahy.Tifrunner.gnm1.ann1.B8YF15 Arachis hypogaea HOM05D005066 ORTHO05D006138 5.9e-105 384.4 223 79.4
DCAR_013911 Daucus carota HOM05D005066 ORTHO05D006138 5.9e-105 384.4 223 79.8
Glyma.04G018500 Glycine max HOM05D005066 ORTHO05D006138 5.9e-105 384.4 223 80.7
Actinidia37971 Actinidia chinensis HOM05D005066 ORTHO05D006138 7.7e-105 384.0 223 81.2
Lj1g0027661 Lotus japonicus HOM05D005066 ORTHO05D006138 1.0e-104 383.6 223 81.2
Sc15g0004490 Simmondsia chinensis HOM05D005066 ORTHO05D006138 1.7e-104 382.9 223 80.3
VMungo1309G2329 Vigna mungo HOM05D005066 ORTHO05D006138 1.7e-104 382.9 223 79.8
SGA_v2.0_scaffold108G30855 Striga asiatica HOM05D005066 ORTHO05D006138 2.2e-104 382.5 223 78.5
HanXRQChr14g0428271 Helianthus annuus HOM05D005066 ORTHO05D006138 2.9e-104 382.1 223 79.4
SalBow7G4394 Salvia bowleyana HOM05D005066 ORTHO05D006138 3.8e-104 381.7 223 78.0
Solyc04g082300.2 Solanum lycopersicum HOM05D005066 ORTHO05D006138 3.8e-104 381.7 222 78.8
Sopen04g035920 Solanum pennellii HOM05D005066 ORTHO05D006138 3.8e-104 381.7 222 78.8
PGSC0003DMG400009976 Solanum tuberosum HOM05D005066 ORTHO05D006138 3.8e-104 381.7 222 78.8
ECA238G2025 Erigeron canadensis HOM05D005066 ORTHO05D006138 1.1e-103 380.2 223 78.9
Glyma.06G018800 Glycine max HOM05D005066 ORTHO05D006138 1.4e-103 379.8 223 79.4
Phvul.009G010100 Phaseolus vulgaris HOM05D005066 ORTHO05D006138 1.4e-103 379.8 223 78.9
TPR.G38213 Trifolium pratense HOM05D005066 ORTHO05D006138 1.9e-103 379.4 223 79.4
MSTRG.27774 Avicennia marina HOM05D005066 ORTHO05D006138 3.2e-103 378.6 223 77.1
CANSAT54G1628 Cannabis sativa HOM05D005066 ORTHO05D006138 3.2e-103 378.6 224 79.9
FAN27G0843 Fragaria x ananassa HOM05D005066 ORTHO05D006138 3.2e-103 378.6 242 76.4
Psat5g011560 Pisum sativum HOM05D005066 ORTHO05D006138 5.5e-103 377.9 223 78.5
Thhalv10018792m.g Eutrema salsugineum HOM05D005066 ORTHO05D006138 7.2e-103 377.5 223 78.5
Medtr3g115200 Medicago truncatula HOM05D005066 ORTHO05D006138 2.1e-102 375.9 223 78.5
Aa31LG4G6350 Aethionema arabicum HOM05D005066 ORTHO05D006138 7.9e-102 374.0 223 77.6
Sp5g31400 Schrenkiella parvula HOM05D005066 ORTHO05D006138 7.9e-102 374.0 223 77.6
BraA07t31713Z Brassica rapa HOM05D005066 ORTHO05D006138 3.0e-101 372.1 223 78.5
AL2G36340 Arabidopsis lyrata HOM05D005066 ORTHO05D006138 8.8e-101 370.5 223 78.5
BcaC08g47273 Brassica carinata HOM05D005066 ORTHO05D006138 1.1e-100 370.2 223 77.1
BolC6t40062H Brassica oleracea HOM05D005066 ORTHO05D006138 1.1e-100 370.2 223 77.1
C06p50230 Brassica napus HOM05D005066 ORTHO05D006138 2.0e-100 369.4 223 77.6
A07p41830 Brassica napus HOM05D005066 ORTHO05D006138 4.4e-100 368.2 223 78.0
PSO170G0128 Papaver somniferum HOM05D005066 ORTHO05D006138 5.7e-100 367.9 223 77.1
BcaC08g47124 Brassica carinata HOM05D005066 ORTHO05D006138 7.4e-100 367.5 223 77.6
unitig_26.g9893 Utricularia gibba HOM05D005066 ORTHO05D006138 9.7e-100 367.1 223 74.4
AT1G76260 Arabidopsis thaliana HOM05D005066 ORTHO05D006138 2.2e-99 365.9 223 78.0
BNapus_Darmor_BZH_scaffold_170p00070 Brassica napus HOM05D005066 ORTHO05D006138 3.7e-99 365.2 233 74.2
MBI05_g05143_MAGBIO Magnolia biondii HOM05D005066 ORTHO05D006138 3.7e-99 365.2 223 75.8
PSO210G7270 Papaver somniferum HOM05D005066 ORTHO05D006138 3.7e-99 365.2 223 76.7
Carub.0002s2315 Capsella rubella HOM05D005066 ORTHO05D006138 1.1e-98 363.6 223 76.2
AUR62043922 Chenopodium quinoa HOM05D005066 ORTHO05D006138 1.4e-98 363.2 222 77.0
CARHR069820 Cardamine hirsuta HOM05D005066 ORTHO05D006138 5.9e-97 357.8 223 75.8
TAR381G1664 Trochodendron aralioides HOM05D005066 ORTHO05D006138 1.0e-96 357.1 208 79.8
AUR62043921 Chenopodium quinoa HOM05D005066 ORTHO05D006138 1.7e-96 356.3 201 82.1
Aqoxy5G01046 Aquilegia oxysepala HOM05D005066 ORTHO05D006138 1.2e-94 350.1 218 74.3
Nn6g31745 Nelumbo nucifera HOM05D005066 ORTHO05D006138 1.2e-94 350.1 210 76.7
AUR62036885 Chenopodium quinoa HOM05D005066 ORTHO05D006138 1.8e-93 346.3 223 74.4
Atru.chr13.151 Acer truncatum HOM05D005066 ORTHO05D006138 7.0e-90 334.3 180 86.1
ATR0661G259 Amborella trichopoda HOM05D005066 ORTHO05D006138 2.0e-89 332.8 223 68.2
Ah.13g072510 Amaranthus hybridus HOM05D005066 ORTHO05D006138 1.3e-88 330.1 187 81.3
Zm00001eb039840 Zea mays HOM05D005066 ORTHO05D006138 9.8e-84 313.9 224 63.8
Os08g0554000 Oryza sativa ssp. japonica HOM05D005066 ORTHO05D006138 8.3e-83 310.8 224 62.9
EL10Ac1g01978 Beta vulgaris HOM05D005066 ORTHO05D006138 1.6e-81 306.6 180 78.9
Zm00001eb180420 Zea mays HOM05D005066 ORTHO05D006138 4.4e-76 288.5 224 59.8
ClCG08G009490 Citrullus lanatus HOM05D005066 ORTHO05D006138 5.4e-74 281.6 158 80.4
SHI08001 Sapria himalayana HOM05D005066 ORTHO05D006138 1.3e-67 260.4 199 64.8
QL02p013964 Quercus lobata HOM05D005066 ORTHO05D006138 8.3e-67 257.7 135 89.6
Mapoly0054s0060 Marchantia polymorpha HOM05D005066 ORTHO05D006138 1.1e-66 257.3 230 50.4
AagrBONN_evm.TU.Sc2ySwM_362.948 Anthoceros agrestis HOM05D005066 ORTHO05D006138 2.8e-62 242.7 225 46.7
AUR62043554 Chenopodium quinoa HOM05D005066 ORTHO05D006138 6.6e-56 221.5 144 72.9
SMO118G0316 Selaginella moellendorffii HOM05D005066 ORTHO05D006138 8.6e-56 221.1 226 46.0
CSS0013002 Camellia sinensis var. sinensis HOM05D005066 ORTHO05D006138 1.5e-55 220.3 146 74.7
ClCG00G005440 Citrullus lanatus HOM05D005066 ORTHO05D006138 2.9e-51 206.1 126 76.2
Actinidia29788 Actinidia chinensis HOM05D005066 ORTHO05D006138 1.8e-45 186.8 140 65.7
CDE02G3878 Ceratophyllum demersum HOM05D005066 ORTHO05D006138 5.2e-45 185.3 108 77.8
QL02p013958 Quercus lobata HOM05D005066 ORTHO05D006138 2.1e-41 173.3 87 93.1
HPP92_008373 Vanilla planifolia HOM05D005066 ORTHO05D006138 4.2e-34 149.1 98 66.3
CARHR021010 Cardamine hirsuta HOM05D005066 ORTHO05D006138 1.2e-25 120.9 76 72.4
SEGI_37952 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 1.2e-25 120.9 81 63.0
Cre02.g109400 Chlamydomonas reinhardtii HOM05D005066 ORTHO05D006138 1.3e-24 117.5 214 29.9
CDE04G2988 Ceratophyllum demersum HOM05D005066 ORTHO05D006138 2.3e-24 116.7 72 69.4
vmacro11237 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 7.4e-23 111.7 63 79.4
vmacro11236 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 2.8e-22 109.8 62 79.0
Actinidia09068 Actinidia chinensis HOM05D005066 ORTHO05D006138 6.2e-14 82.0 54 74.1
arahy.Tifrunner.gnm1.ann1.7RQ6TB Arachis hypogaea HOM05D005066 ORTHO05D006138 8.1e-14 81.6 57 59.6
Actinidia07458 Actinidia chinensis HOM05D005066 ORTHO05D006138 3.1e-13 79.7 44 77.3
CBR_g17938 Chara braunii HOM05D005066 ORTHO05D006138 2.2e-11 73.6 70 44.3
AUR62038170 Chenopodium quinoa HOM05D000030 ORTHO05D000031 2.9e-11 73.2 116 37.1
arahy.Tifrunner.gnm1.ann1.FBZU85 Arachis hypogaea HOM05D005066 ORTHO05D006138 5.5e-10 68.9 42 64.3
AUR62018933 Chenopodium quinoa HOM05D000030 ORTHO05D000031 6.0e-09 65.5 52 57.7
Nn4g22810 Nelumbo nucifera HOM05D005066 ORTHO05D006138 6.0e-09 65.5 41 65.9
vmacro21823 Vaccinium macrocarpon HOM05D005066 ORTHO05D006138 1.1e-07 61.2 33 72.7
SGA_v2.0_scaffold275G46594 Striga asiatica HOM05D005066 ORTHO05D406259 9.6e-07 58.2 28 78.6
SEGI_12583 Sequoiadendron giganteum HOM05D005066 ORTHO05D006138 2.8e-06 56.6 68 38.2


User provided reference genes

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