Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 1.7e-80 302.8 167 100.0
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 2.3e-77 292.4 167 95.8
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.1e-74 283.5 167 91.0
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.8e-74 282.7 167 91.6
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.2e-73 280.0 167 91.6
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.2e-70 270.0 167 87.4
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.0e-69 266.9 168 85.7
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.7e-69 266.2 168 85.1
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.0e-69 265.4 168 85.1
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 3.9e-69 265.0 168 87.5
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 5.1e-69 264.6 167 85.6
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 6.6e-69 264.2 168 83.9
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 1.5e-68 263.1 167 85.0
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 1.9e-68 262.7 168 86.3
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 2.5e-68 262.3 167 82.6
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 3.3e-68 261.9 168 86.9
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 4.3e-68 261.5 168 85.7
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 6.2e-67 257.7 168 85.1
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 8.1e-67 257.3 167 84.4
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 4.0e-66 255.0 169 82.2
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 6.9e-66 254.2 168 81.5
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.5e-65 253.1 168 82.1
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 2.0e-65 252.7 169 81.7
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 2.0e-65 252.7 168 83.3
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 2.6e-65 252.3 169 80.5
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 3.4e-65 251.9 169 81.7
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 3.4e-65 251.9 161 83.2
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 3.4e-65 251.9 167 80.2
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.7e-64 249.6 171 81.3
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 1.7e-64 249.6 171 81.3
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.7e-64 249.6 169 81.1
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 2.9e-64 248.8 170 79.4
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.8e-64 248.4 168 80.4
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 3.8e-64 248.4 167 76.6
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 4.9e-64 248.1 167 79.0
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 6.4e-64 247.7 167 78.4
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 1.1e-63 246.9 167 78.4
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 1.9e-63 246.1 168 81.0
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 2.4e-63 245.7 169 82.2
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 2.4e-63 245.7 167 77.2
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 2.4e-63 245.7 167 75.4
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 3.2e-63 245.4 169 78.7
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 5.4e-63 244.6 167 78.4
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 5.4e-63 244.6 169 79.3
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 5.4e-63 244.6 169 79.3
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 5.4e-63 244.6 170 79.4
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 5.4e-63 244.6 169 78.7
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 2.1e-62 242.7 169 75.7
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 2.7e-62 242.3 169 80.5
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 3.5e-62 241.9 167 78.4
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.5e-62 241.9 170 78.2
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 6.0e-62 241.1 169 79.9
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 6.0e-62 241.1 168 76.8
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 7.9e-62 240.7 169 78.7
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.3e-61 240.0 169 81.7
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 2.3e-61 239.2 163 80.4
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 3.0e-61 238.8 169 78.1
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 5.1e-61 238.0 169 78.1
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 5.1e-61 238.0 167 73.7
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 1.5e-60 236.5 172 76.7
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 1.5e-60 236.5 168 80.4
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 1.5e-60 236.5 168 74.4
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 2.5e-60 235.7 171 78.9
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.3e-59 233.4 169 75.7
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 6.2e-59 231.1 167 73.1
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 1.1e-58 230.3 169 75.7
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 2.4e-58 229.2 167 74.9
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 3.1e-58 228.8 167 75.4
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 5.3e-58 228.0 170 71.8
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 9.0e-58 227.3 170 76.5
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 9.0e-58 227.3 153 80.4
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.2e-57 226.9 164 76.2
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 1.5e-57 226.5 168 70.8
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 2.0e-57 226.1 169 73.4
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 71.6
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.3e-56 223.4 169 71.6
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 1.3e-56 223.4 167 72.5
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.3e-56 223.4 171 71.9
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 1.7e-56 223.0 168 73.2
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.9e-56 222.2 173 73.4
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 3.8e-56 221.9 168 72.0
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 3.8e-56 221.9 166 71.1
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 4.9e-56 221.5 170 73.5
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 4.9e-56 221.5 168 72.6
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 8.4e-56 220.7 169 71.0
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.1e-55 220.3 169 72.2
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 1.4e-55 219.9 169 70.4
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 1.9e-55 219.5 162 77.2
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 2.4e-55 219.2 169 70.4
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 2.4e-55 219.2 169 69.8
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 2.4e-55 219.2 167 71.3
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 2.4e-55 219.2 169 69.8
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 2.4e-55 219.2 167 71.3
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 3.2e-55 218.8 167 70.7
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 4.2e-55 218.4 169 69.8
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 4.2e-55 218.4 169 69.8
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 4.2e-55 218.4 169 69.8
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 5.5e-55 218.0 167 70.7
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 5.5e-55 218.0 170 72.4
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 7.1e-55 217.6 169 71.0
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 9.3e-55 217.2 169 71.0
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 9.3e-55 217.2 169 70.4
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 9.3e-55 217.2 168 71.4
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 1.2e-54 216.9 168 70.8
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 1.2e-54 216.9 168 70.8
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 2.1e-54 216.1 167 71.9
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 3.5e-54 215.3 172 70.3
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 6.0e-54 214.5 168 69.6
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 7.9e-54 214.2 172 68.0
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 1.0e-53 213.8 172 68.6
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.0e-53 213.8 163 69.9
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.0e-53 213.8 167 68.9
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 1.3e-53 213.4 164 70.1
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 1.8e-53 213.0 171 69.0
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.3e-53 212.6 168 70.2
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 2.3e-53 212.6 146 80.1
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 68.8
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 68.8
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 68.8
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 3.0e-53 212.2 170 69.4
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 3.9e-53 211.8 171 68.4
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 6.7e-53 211.1 171 68.4
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 6.7e-53 211.1 171 68.4
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 6.7e-53 211.1 171 68.4
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 8.7e-53 210.7 165 69.1
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 8.7e-53 210.7 156 71.8
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 1.1e-52 210.3 170 68.2
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 1.5e-52 209.9 170 71.2
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 4.3e-52 208.4 167 68.9
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 4.3e-52 208.4 171 69.6
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 4.3e-52 208.4 171 69.6
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.1e-51 206.1 168 65.5
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 2.8e-51 205.7 170 69.4
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.6e-49 199.1 168 66.7
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 3.4e-49 198.7 172 67.4
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.0e-48 197.2 161 65.2
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 1.3e-48 196.8 170 66.5
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 2.2e-48 196.1 169 66.3
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 6.7e-45 184.5 102 86.3
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 9.7e-44 180.6 102 84.3
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 1.1e-42 177.2 100 83.0
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 5.3e-42 174.9 100 84.0
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 4.5e-41 171.8 168 61.3
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 4.2e-39 165.2 169 59.8
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.1e-38 162.9 173 56.6
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 2.3e-37 159.5 168 58.3
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 9.7e-36 154.1 141 63.1
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 2.2e-35 152.9 217 47.9
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.5e-33 146.7 171 49.7
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 2.2e-32 142.9 175 49.1
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.9e-32 142.5 167 50.3
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 2.5e-31 139.4 176 47.7
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 5.5e-31 138.3 171 49.1
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 3.6e-30 135.6 178 55.6
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 1.5e-28 130.2 171 49.7
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 8.2e-27 124.4 146 50.0
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.1e-26 124.0 70 81.4
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 1.8e-26 123.2 145 47.6
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 5.3e-26 121.7 70 78.6
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 1.4e-23 113.6 168 43.5
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 2.1e-22 109.8 161 44.1
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.3e-20 102.4 67 73.1
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 9.1e-18 94.4 81 61.7
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 1.1e-15 87.4 44 88.6
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 4.1e-10 68.9 73 67.1
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 8.5e-08 61.2 62 64.5


User provided reference genes

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