Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 1.2e-180 636.3 319 100.0
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 6.7e-179 630.6 319 99.1
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 6.4e-145 517.7 319 83.7
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 3.5e-143 511.9 323 83.9
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 4.9e-129 464.9 328 75.9
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 5.4e-128 461.5 327 74.0
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 5.1e-126 454.9 332 71.7
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 8.6e-126 454.1 331 73.7
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 4.3e-125 451.8 327 74.0
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 1.8e-123 446.4 326 71.5
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 6.8e-123 444.5 333 73.3
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 2.6e-122 442.6 325 70.5
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 5.8e-122 441.4 333 72.7
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.3e-121 440.3 325 71.1
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 3.8e-121 438.7 326 72.1
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 4.9e-121 438.3 326 70.6
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 2.4e-120 436.0 322 69.3
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 1.2e-119 433.7 325 69.2
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 3.5e-119 432.2 327 71.3
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 1.0e-118 430.6 331 68.9
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 3.0e-118 429.1 326 69.9
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 1.3e-116 423.7 331 69.5
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 2.8e-116 422.5 321 70.1
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 2.8e-116 422.5 334 69.5
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 4.8e-116 421.8 327 70.9
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 6.2e-116 421.4 327 69.4
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 8.1e-116 421.0 331 68.0
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 1.4e-115 420.2 327 68.8
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 1.8e-115 419.9 333 67.9
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 5.3e-115 418.3 334 68.6
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 5.8e-114 414.8 332 67.2
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 5.8e-114 414.8 331 68.3
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 7.6e-114 414.5 331 69.2
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 2.2e-113 412.9 334 67.4
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 6.4e-113 411.4 338 66.6
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 8.4e-113 411.0 326 66.3
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 1.4e-112 410.2 333 66.4
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 2.4e-112 409.5 333 67.3
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 5.4e-112 408.3 325 66.8
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 1.2e-111 407.1 332 66.6
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 3.5e-111 405.6 334 67.7
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 7.9e-111 404.4 331 66.8
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 1.3e-110 403.7 331 65.6
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 5.1e-110 401.7 322 68.9
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 6.6e-110 401.4 326 66.6
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 8.7e-110 401.0 326 66.6
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 2.1e-108 396.4 331 65.0
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 4.0e-107 392.1 326 66.6
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 9.0e-107 391.0 331 64.7
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 9.0e-107 391.0 331 65.3
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 2.6e-106 389.4 328 66.2
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 7.6e-106 387.9 348 64.4
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 2.9e-105 386.0 325 65.5
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 3.8e-105 385.6 347 63.7
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 1.6e-103 380.2 334 65.0
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 6.0e-103 378.3 327 65.7
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 1.0e-102 377.5 326 64.4
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 1.0e-102 377.5 321 65.1
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 2.3e-102 376.3 330 63.0
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 3.0e-102 375.9 326 64.1
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 3.9e-102 375.6 278 68.3
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 6.7e-102 374.8 334 65.6
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 6.7e-102 374.8 335 64.2
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 1.1e-101 374.0 326 64.4
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 2.5e-101 372.9 328 64.0
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 7.4e-101 371.3 319 62.4
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 1.1e-99 367.5 331 64.0
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.1e-99 367.5 326 63.5
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.4e-99 366.3 324 63.9
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 9.0e-99 364.4 319 61.1
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 1.2e-98 364.0 319 61.4
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 7.6e-98 361.3 326 62.6
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.0e-97 360.9 320 63.4
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 1.0e-97 360.9 335 62.4
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 2.2e-97 359.8 319 60.5
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 3.8e-97 359.0 335 62.7
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 4.9e-97 358.6 319 60.8
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 6.5e-97 358.2 297 64.6
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 7.1e-96 354.8 326 60.7
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 7.1e-96 354.8 329 59.9
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 9.3e-96 354.4 328 59.5
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 2.7e-95 352.8 331 61.6
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 3.5e-95 352.4 319 59.2
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 3.5e-95 352.4 297 63.6
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 3.0e-94 349.4 332 60.5
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 1.5e-93 347.1 329 60.2
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 1.3e-92 344.0 320 60.9
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 6.2e-92 341.7 322 61.5
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 4.1e-91 339.0 340 59.1
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 1.1e-88 330.9 319 56.7
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 1.1e-88 330.9 319 56.7
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 5.5e-88 328.6 336 58.0
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 4.6e-87 325.5 319 55.5
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 1.3e-86 323.9 319 55.5
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.8e-86 323.6 342 57.0
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.8e-86 323.6 311 59.2
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 2.3e-86 323.2 328 58.8
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 3.0e-86 322.8 319 55.2
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 7.4e-85 318.2 324 56.5
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.8e-84 316.2 340 56.8
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.8e-83 313.5 342 55.3
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 4.1e-83 312.4 323 56.0
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 6.9e-83 311.6 312 58.7
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 2.6e-82 309.7 328 55.5
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 7.7e-82 308.1 329 55.0
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 2.2e-81 306.6 333 54.4
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 8.5e-81 304.7 324 57.1
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.0e-78 297.7 323 55.7
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 9.7e-69 264.6 344 48.3
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 2.4e-67 260.0 333 50.2
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 3.1e-67 259.6 331 49.2
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 2.5e-64 250.0 331 48.6
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 1.8e-62 243.8 323 47.7
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 5.3e-59 232.3 323 46.7
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 1.5e-56 224.2 240 54.6
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 4.2e-56 222.6 411 38.9
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 2.7e-55 219.9 142 81.7
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 7.5e-53 211.8 327 42.8
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 5.2e-46 189.1 261 48.3
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 2.0e-45 187.2 261 47.1
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 2.8e-44 183.3 261 46.0
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 1.8e-43 180.6 245 46.1
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.5e-40 170.2 125 72.8
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 3.3e-40 169.9 218 45.4
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 9.5e-40 168.3 216 51.4
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 4.9e-36 156.0 271 39.9
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 6.4e-36 155.6 131 64.9
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 1.0e-33 148.3 161 53.4
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 3.0e-17 93.6 69 63.8


User provided reference genes

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