Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 5.3e-116 421.0 209 100.0
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 7.5e-94 347.4 266 71.1
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 4.8e-93 344.7 266 69.9
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.4e-92 343.2 265 70.2
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.4e-87 326.6 265 66.0
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 5.2e-87 324.7 269 64.3
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 4.8e-85 318.2 270 63.3
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 2.4e-84 315.8 232 70.3
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 4.1e-84 315.1 263 62.7
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 7.0e-84 314.3 232 69.4
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 1.2e-83 313.5 264 63.6
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 2.0e-83 312.8 265 63.4
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 7.7e-83 310.8 212 75.0
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-82 310.1 232 69.0
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-82 310.1 232 69.0
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.3e-82 310.1 232 69.0
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 2.3e-82 309.3 238 67.2
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.8e-82 308.5 214 73.8
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 3.8e-82 308.5 267 60.7
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 5.0e-82 308.1 232 67.7
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.9e-81 306.2 269 59.5
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 2.5e-81 305.8 263 60.8
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 3.3e-81 305.4 269 59.5
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 4.2e-81 305.1 214 72.4
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 5.5e-81 304.7 237 66.7
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 5.5e-81 304.7 238 67.2
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 7.2e-81 304.3 271 61.3
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 9.5e-81 303.9 232 65.9
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 9.5e-81 303.9 232 67.7
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.6e-80 303.1 252 64.3
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 2.1e-80 302.8 210 73.8
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 2.1e-80 302.8 215 72.1
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 2.8e-80 302.4 238 66.0
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 3.6e-80 302.0 215 72.1
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 8.0e-80 300.8 216 71.3
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 1.8e-79 299.7 230 67.0
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 2.3e-79 299.3 230 67.8
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 2.3e-79 299.3 230 67.0
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 3.0e-79 298.9 232 65.1
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 5.2e-79 298.1 264 59.8
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 8.9e-79 297.4 216 71.3
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 8.9e-79 297.4 265 61.5
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 2.6e-78 295.8 232 66.8
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.4e-78 295.0 238 64.3
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 5.7e-78 294.7 225 65.8
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 5.7e-78 294.7 243 63.0
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 7.5e-78 294.3 232 66.4
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 7.5e-78 294.3 269 58.0
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 9.8e-78 293.9 214 69.2
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 9.8e-78 293.9 214 69.2
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 9.8e-78 293.9 214 69.2
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.7e-77 293.1 215 67.9
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 2.2e-77 292.7 262 59.9
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 2.8e-77 292.4 215 67.9
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.8e-77 292.4 215 67.9
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 3.7e-77 292.0 212 69.3
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 4.9e-77 291.6 232 65.9
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 6.3e-77 291.2 240 63.8
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 8.3e-77 290.8 242 64.0
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 1.1e-76 290.4 214 68.7
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 1.1e-76 290.4 214 68.7
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 2.7e-75 285.8 183 79.2
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 2.7e-75 285.8 233 63.5
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 1.0e-74 283.9 266 56.4
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.9e-74 282.0 223 65.0
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.1e-73 280.4 223 64.1
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 1.1e-73 280.4 213 66.7
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 1.9e-73 279.6 243 60.5
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.9e-73 279.6 214 67.3
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 2.5e-73 279.3 223 63.2
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 3.3e-73 278.9 243 60.1
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 3.3e-73 278.9 212 64.6
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 4.3e-73 278.5 223 64.1
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 9.5e-73 277.3 267 55.1
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 2.8e-72 275.8 222 63.5
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 8.0e-72 274.2 224 62.1
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 1.8e-71 273.1 213 65.7
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 5.2e-71 271.6 216 63.9
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 6.8e-71 271.2 250 60.0
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 6.8e-71 271.2 212 66.0
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 6.8e-71 271.2 213 63.4
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 1.2e-70 270.4 306 51.0
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 1.2e-70 270.4 216 64.4
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 4.4e-70 268.5 213 63.8
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 9.8e-70 267.3 140 96.4
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 1.3e-69 266.9 211 62.6
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 4.9e-69 265.0 211 62.1
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 3.2e-68 262.3 264 56.4
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 2.7e-67 259.2 170 77.6
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.0e-66 257.3 284 49.6
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.3e-65 252.3 171 74.3
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.3e-65 252.3 171 74.3
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.3e-65 252.3 175 73.1
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 4.4e-62 241.9 197 62.9
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 1.7e-61 240.0 172 70.9
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 3.7e-61 238.8 161 73.9
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 1.1e-60 237.3 145 75.9
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 3.0e-58 229.2 216 57.9
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 4.3e-57 225.3 204 56.4
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 1.9e-52 209.9 143 76.9
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 3.3e-49 199.1 228 46.9
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 8.9e-47 191.0 240 47.1
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 9.2e-44 181.0 262 43.1
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 7.8e-43 177.9 141 66.0
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 7.6e-38 161.4 110 70.0
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 1.9e-25 120.2 106 57.5
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 6.2e-24 115.2 213 33.8
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.4e-23 114.0 101 57.4
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 7.4e-17 91.7 171 35.1
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 5.5e-12 75.5 56 69.6
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 6.1e-11 72.0 52 67.3


User provided reference genes

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