Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 1.0e-225 786.6 451 100.0
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 2.5e-118 429.9 324 84.9
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 2.6e-83 313.5 329 65.3
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 1.3e-82 311.2 326 65.0
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 8.9e-68 261.9 333 53.5
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.9e-63 246.5 324 50.6
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 3.4e-59 233.4 319 58.3
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 6.4e-58 229.2 327 56.6
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 6.0e-56 222.6 338 53.6
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 6.0e-56 222.6 338 53.6
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 6.6e-55 219.2 330 47.9
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 1.9e-54 217.6 333 55.3
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 1.2e-53 214.9 320 49.7
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 6.8e-52 209.1 315 54.0
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 8.9e-52 208.8 330 48.2
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 1.5e-51 208.0 339 49.9
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 4.4e-51 206.5 336 50.6
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 2.2e-50 204.1 336 50.3
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 6.4e-50 202.6 334 53.3
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 7.1e-49 199.1 336 48.5
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.6e-48 198.0 338 47.0
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 2.1e-48 197.6 334 47.0
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 1.7e-47 194.5 338 47.9
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 5.1e-47 193.0 332 47.9
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 8.7e-47 192.2 342 47.1
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 1.1e-46 191.8 296 46.6
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.5e-46 190.7 359 45.1
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 2.5e-46 190.7 348 46.0
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 3.3e-46 190.3 334 50.9
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 4.3e-46 189.9 305 54.1
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 4.3e-46 189.9 341 46.6
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 5.6e-46 189.5 341 46.9
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 7.3e-46 189.1 315 50.5
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 9.6e-46 188.7 335 51.3
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 9.6e-46 188.7 348 46.6
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 1.6e-45 188.0 274 52.2
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 2.1e-45 187.6 334 41.9
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 2.8e-45 187.2 263 53.6
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 3.6e-45 186.8 334 50.0
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 6.2e-45 186.0 333 48.3
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 1.1e-44 185.3 299 50.5
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.8e-44 184.5 305 53.1
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 1.5e-43 181.4 302 51.3
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.5e-43 181.4 317 43.5
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 4.4e-43 179.9 265 45.7
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 7.6e-43 179.1 253 49.4
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 9.9e-43 178.7 307 53.1
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 9.9e-43 178.7 280 51.1
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 1.3e-42 178.3 258 47.7
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 2.2e-42 177.6 293 47.4
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 6.4e-42 176.0 296 50.3
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 6.4e-42 176.0 260 48.8
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 1.4e-41 174.9 317 45.4
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.9e-41 174.5 342 47.4
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 3.2e-41 173.7 281 50.5
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 5.4e-41 172.9 240 47.5
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 7.1e-41 172.6 242 47.5
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 1.6e-40 171.4 262 49.6
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 1.6e-40 171.4 327 43.7
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.6e-40 171.4 259 48.6
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 2.1e-40 171.0 311 41.8
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 6.0e-40 169.5 347 49.6
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.3e-39 167.5 333 44.7
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 2.3e-39 167.5 274 48.9
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 2.3e-39 167.5 255 49.4
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.9e-39 166.8 302 41.1
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 5.1e-39 166.4 259 45.9
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 6.6e-39 166.0 252 54.0
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 1.5e-38 164.9 245 52.2
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 2.5e-38 164.1 258 48.8
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 5.6e-38 162.9 242 53.7
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 2.1e-37 161.0 252 52.4
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 2.1e-37 161.0 369 41.7
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 2.8e-37 160.6 246 54.1
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 6.2e-37 159.5 243 46.1
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.1e-36 158.7 306 48.7
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 3.1e-36 157.1 250 52.4
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 4.0e-36 156.8 254 51.6
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 1.5e-35 154.8 241 49.8
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 2.6e-35 154.1 299 38.8
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 4.5e-35 153.3 246 50.8
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 7.6e-35 152.5 304 46.7
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 9.9e-35 152.1 267 48.7
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 9.9e-35 152.1 270 47.0
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.7e-34 151.4 345 39.7
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 3.8e-34 150.2 359 42.3
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 2.4e-33 147.5 261 46.4
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 1.2e-32 145.2 268 41.4
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 1.6e-32 144.8 268 41.8
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 2.7e-32 144.1 258 41.9
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 4.6e-32 143.3 304 44.1
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 6.0e-32 142.9 255 43.1
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 7.9e-32 142.5 239 43.5
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 3.0e-31 140.6 243 42.8
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.5e-30 137.5 234 49.6
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 3.3e-30 137.1 334 39.2
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.3e-30 136.7 255 39.6
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 5.8e-27 126.3 214 42.5
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 1.7e-26 124.8 105 66.7
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 1.6e-24 118.2 106 60.4
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 3.7e-21 107.1 136 56.6
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 2.4e-20 104.4 161 44.7
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 3.8e-18 97.1 105 60.0
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 3.2e-17 94.0 263 34.6
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 5.1e-15 86.7 77 64.9
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 9.7e-14 82.4 213 36.2
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 6.9e-12 76.3 86 53.5
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 4.5e-11 73.6 115 60.9
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 1.0e-10 72.4 289 34.6
Psat5g000080 Pisum sativum HOM05D006924 ORTHO05D008218 4.2e-09 67.0 91 47.3
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 7.2e-09 66.2 258 32.2
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 7.9e-08 62.8 306 28.4
TPR.G31762 Trifolium pratense HOM05D006924 ORTHO05D008218 2.3e-07 61.2 69 50.7
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 8.8e-07 59.3 255 27.1
TAR626G1880 Trochodendron aralioides HOM05D006924 ORTHO05D008218 1.1e-06 58.9 129 49.6


User provided reference genes

Program Settings